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The map label for this gene is trg [C]

Identifier: 229916884

GI number: 229916884

Start: 1124665

End: 1126362

Strand: Reverse

Name: trg [C]

Synonym: EAT1b_1157

Alternate gene names: 229916884

Gene position: 1126362-1124665 (Counterclockwise)

Preceding gene: 229916885

Following gene: 229916883

Centisome position: 37.55

GC content: 53.53

Gene sequence:

>1698_bases
ATGTGGAACAAATGGACGTTATCAAAAAAAATCATGGCAAGTGTCGGCTTGATCCTGATTCTGACATTGGTCGGGATGGC
CTATAATCTGTGGACGCTCGATCGGATGACGAGTCAGTATGAACAGATGATCTCAAACGATGTCATGAAGATGAAAGCAG
CGGACGACTTGGCGCTCGGGATGGTGCGCCAGGCGTATGGGGTTCGTGGGTATGTGCTCGTACAAGACGATGAACGAAAA
CAACAAATCACCCAGGGTGGGGAAGAAAAGAAAGCCGCCATCGAATCGTTGATCGAACTCGCGGACAACGAGTCCGAACG
AAAAGAATTTGAAGCGTTACTCGAATATGCGACTGGATATGACGAGTTGGCGACACAAGCCATCACGGCGATTGACTCAA
AAGATCAAGAAGCAATCGATCGTTTGACGCTCCGTCTCATGCCGGACGTGACAAAGTCGATCGCATCGACCGGTGACGCA
TTGCAGACCGAGACCGAAGAGAAGATGTTTGCGATGCAAACGGAGCTCCAAGAAGCGAGTCAGCGTGCCTTCTGGTACTC
GGTCGTCATCGCCGTCGTCAGTTTTATCCTGACGATGGGCGCCGGATATGCAATCAGCCACATGGTGACGGCACCGCTCC
GTTTCTTAGCGAAAGAAGTGGACGTTGTGGCGGAAGGAGATTTGACACGTGAGGATCTTCAGGCGCTCACACAAGATGAA
ATCGGACAATTGATGACCGGCTTCAACCGCATGAAAGGCAACTTACGTGAACTGATTGACCGTGTCACCCAAAACGCGCA
GGAAATCACGGCACAATCGGAAGAACTCTATGCGAGCACGGAAGAGATGGCGTCGCAGACGGAGGAAACGACACGTCTCA
TCGACCGAATCGTAGAAGAGACGGTCGCGCAGGCGAAAGAAGCGACAGGGACGTCGCAAGCGGTGGCTGCTGCCGATGAA
GGCATCGGTCGGATTGCCGGGTCCATCGGCTCGATTGACGATGACGTGTCACAGAGTTTGATGCTCGCCGAAGAAGGTGG
TGCGACGATGGCTCAGGCGAAAGACGAGGTACTCGCTTTGGAGCGGGAGACACGTCTGACGGGAGAATCGATTTCGGCAC
TGAAGCAACAGTCTGACGAGATCGCACTCATCACCGAGGTCATCCAATCCATCACGGATCAGACGAACTTATTGGCATTG
AACGCGGCCATCGAGGCGGCACGTGCCGGTGAACAAGGAAAAGGATTCGCCGTCGTCGCAGAAGAAGTACGTAAGCTTGC
CGAGCAGTCGAAACAGTCGGCGACACAAATCGCTGGGTTAATCGAGTCGATTCAGGCACAGTCGAACGCCGTTCTCGACC
AACACGTCGTCAGTGCGAAACGCGTCGAGACGAACACGTTGTTGCTTGAACGAGCGACACGCGCGTTCGAACAGATTGTC
AGTCAGCTCGAGACATCAGTCGACAATACGTCACATATCCGCATCGCCTCGCACGAGATTGCGGAGACGACGAAACAAGT
CGCGACGTCCTCTCTTCAAATGTCACAAGACAGTGAAGGGATGGCCGACACGATGCGTACGGTCGGTGAGACAGCTGATG
CTCAACTCGCGATGATTCAAGAGTTGAACGGGGTCGCCGAGTCGCTCGGCAATATGACGAGTGACCTGCAGACGCTGATT
GGAAAGTTCACGACATAA

Upstream 100 bases:

>100_bases
ACAAATTAGGCTGTTGTGTCCGATAAAGAAAAGGCAATACATAAAAATAGAGAGAAAAAGAGGTGGAAGAGGAGATTACT
CCTCGTAGTACGTGAAAAAG

Downstream 100 bases:

>100_bases
AATGAAAGTCCTGCCTCTTCGGAGTCAGGGCTTTTCGTTCACATCGGAACGATTCGCGATGAAGAAAGTGGGGAATGAAC
AACAAGGTAAACGACAAAAA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 565; Mature: 565

Protein sequence:

>565_residues
MWNKWTLSKKIMASVGLILILTLVGMAYNLWTLDRMTSQYEQMISNDVMKMKAADDLALGMVRQAYGVRGYVLVQDDERK
QQITQGGEEKKAAIESLIELADNESERKEFEALLEYATGYDELATQAITAIDSKDQEAIDRLTLRLMPDVTKSIASTGDA
LQTETEEKMFAMQTELQEASQRAFWYSVVIAVVSFILTMGAGYAISHMVTAPLRFLAKEVDVVAEGDLTREDLQALTQDE
IGQLMTGFNRMKGNLRELIDRVTQNAQEITAQSEELYASTEEMASQTEETTRLIDRIVEETVAQAKEATGTSQAVAAADE
GIGRIAGSIGSIDDDVSQSLMLAEEGGATMAQAKDEVLALERETRLTGESISALKQQSDEIALITEVIQSITDQTNLLAL
NAAIEAARAGEQGKGFAVVAEEVRKLAEQSKQSATQIAGLIESIQAQSNAVLDQHVVSAKRVETNTLLLERATRAFEQIV
SQLETSVDNTSHIRIASHEIAETTKQVATSSLQMSQDSEGMADTMRTVGETADAQLAMIQELNGVAESLGNMTSDLQTLI
GKFTT

Sequences:

>Translated_565_residues
MWNKWTLSKKIMASVGLILILTLVGMAYNLWTLDRMTSQYEQMISNDVMKMKAADDLALGMVRQAYGVRGYVLVQDDERK
QQITQGGEEKKAAIESLIELADNESERKEFEALLEYATGYDELATQAITAIDSKDQEAIDRLTLRLMPDVTKSIASTGDA
LQTETEEKMFAMQTELQEASQRAFWYSVVIAVVSFILTMGAGYAISHMVTAPLRFLAKEVDVVAEGDLTREDLQALTQDE
IGQLMTGFNRMKGNLRELIDRVTQNAQEITAQSEELYASTEEMASQTEETTRLIDRIVEETVAQAKEATGTSQAVAAADE
GIGRIAGSIGSIDDDVSQSLMLAEEGGATMAQAKDEVLALERETRLTGESISALKQQSDEIALITEVIQSITDQTNLLAL
NAAIEAARAGEQGKGFAVVAEEVRKLAEQSKQSATQIAGLIESIQAQSNAVLDQHVVSAKRVETNTLLLERATRAFEQIV
SQLETSVDNTSHIRIASHEIAETTKQVATSSLQMSQDSEGMADTMRTVGETADAQLAMIQELNGVAESLGNMTSDLQTLI
GKFTT
>Mature_565_residues
MWNKWTLSKKIMASVGLILILTLVGMAYNLWTLDRMTSQYEQMISNDVMKMKAADDLALGMVRQAYGVRGYVLVQDDERK
QQITQGGEEKKAAIESLIELADNESERKEFEALLEYATGYDELATQAITAIDSKDQEAIDRLTLRLMPDVTKSIASTGDA
LQTETEEKMFAMQTELQEASQRAFWYSVVIAVVSFILTMGAGYAISHMVTAPLRFLAKEVDVVAEGDLTREDLQALTQDE
IGQLMTGFNRMKGNLRELIDRVTQNAQEITAQSEELYASTEEMASQTEETTRLIDRIVEETVAQAKEATGTSQAVAAADE
GIGRIAGSIGSIDDDVSQSLMLAEEGGATMAQAKDEVLALERETRLTGESISALKQQSDEIALITEVIQSITDQTNLLAL
NAAIEAARAGEQGKGFAVVAEEVRKLAEQSKQSATQIAGLIESIQAQSNAVLDQHVVSAKRVETNTLLLERATRAFEQIV
SQLETSVDNTSHIRIASHEIAETTKQVATSSLQMSQDSEGMADTMRTVGETADAQLAMIQELNGVAESLGNMTSDLQTLI
GKFTT

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1787690, Length=264, Percent_Identity=34.469696969697, Blast_Score=118, Evalue=1e-27,
Organism=Escherichia coli, GI2367378, Length=333, Percent_Identity=30.03003003003, Blast_Score=110, Evalue=3e-25,
Organism=Escherichia coli, GI1788194, Length=389, Percent_Identity=28.7917737789203, Blast_Score=108, Evalue=1e-24,
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=31.1111111111111, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1789453, Length=306, Percent_Identity=29.4117647058824, Blast_Score=94, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 61668; Mature: 61668

Theoretical pI: Translated: 4.17; Mature: 4.17

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWNKWTLSKKIMASVGLILILTLVGMAYNLWTLDRMTSQYEQMISNDVMKMKAADDLALG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVRQAYGVRGYVLVQDDERKQQITQGGEEKKAAIESLIELADNESERKEFEALLEYATGY
HHHHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
DELATQAITAIDSKDQEAIDRLTLRLMPDVTKSIASTGDALQTETEEKMFAMQTELQEAS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRAFWYSVVIAVVSFILTMGAGYAISHMVTAPLRFLAKEVDVVAEGDLTREDLQALTQDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IGQLMTGFNRMKGNLRELIDRVTQNAQEITAQSEELYASTEEMASQTEETTRLIDRIVEE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAQAKEATGTSQAVAAADEGIGRIAGSIGSIDDDVSQSLMLAEEGGATMAQAKDEVLAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ERETRLTGESISALKQQSDEIALITEVIQSITDQTNLLALNAAIEAARAGEQGKGFAVVA
HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
EEVRKLAEQSKQSATQIAGLIESIQAQSNAVLDQHVVSAKRVETNTLLLERATRAFEQIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLETSVDNTSHIRIASHEIAETTKQVATSSLQMSQDSEGMADTMRTVGETADAQLAMIQ
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
ELNGVAESLGNMTSDLQTLIGKFTT
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MWNKWTLSKKIMASVGLILILTLVGMAYNLWTLDRMTSQYEQMISNDVMKMKAADDLALG
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MVRQAYGVRGYVLVQDDERKQQITQGGEEKKAAIESLIELADNESERKEFEALLEYATGY
HHHHHHCCCCEEEEECCHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCH
DELATQAITAIDSKDQEAIDRLTLRLMPDVTKSIASTGDALQTETEEKMFAMQTELQEAS
HHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QRAFWYSVVIAVVSFILTMGAGYAISHMVTAPLRFLAKEVDVVAEGDLTREDLQALTQDE
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IGQLMTGFNRMKGNLRELIDRVTQNAQEITAQSEELYASTEEMASQTEETTRLIDRIVEE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVAQAKEATGTSQAVAAADEGIGRIAGSIGSIDDDVSQSLMLAEEGGATMAQAKDEVLAL
HHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHH
ERETRLTGESISALKQQSDEIALITEVIQSITDQTNLLALNAAIEAARAGEQGKGFAVVA
HHHHHCCHHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHH
EEVRKLAEQSKQSATQIAGLIESIQAQSNAVLDQHVVSAKRVETNTLLLERATRAFEQIV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SQLETSVDNTSHIRIASHEIAETTKQVATSSLQMSQDSEGMADTMRTVGETADAQLAMIQ
HHHHHHCCCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHH
ELNGVAESLGNMTSDLQTLIGKFTT
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA