| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916879
Identifier: 229916879
GI number: 229916879
Start: 1121195
End: 1122352
Strand: Direct
Name: 229916879
Synonym: EAT1b_1152
Alternate gene names: NA
Gene position: 1121195-1122352 (Clockwise)
Preceding gene: 229916873
Following gene: 229916882
Centisome position: 37.37
GC content: 56.3
Gene sequence:
>1158_bases GTGACTTGTCCCCACTGCGGAAAGAAGACACGATCGAAAACGGTTTGTCCGACGTGTGGCCGCCGCTCACGTCGCACGAT TTGGTTATTTGCCGTCCCATTCGCTATCGCACTCATTGCCTTTGTCACCTTCATTGGAAACGCCTATTTCACGGACATGT TGCGTTCGACCGACTCGCTCGCTGATCAGGTCAACTTGCCGATCGGGGAAGAGACGGTATCCGCTGACGAAGCGACACCG GTCGACTTCGCCGCCTTACAGGATAGCCTCTTCACCGTCAGTTACGGGACAGGATTTTTGGTGAGCTCACGCGATGTCGT GACGGCTGCCTCGAATGTGGCTGGGTTGACGAATATCATCATGTACCATGACGGTGAGGCCGTCTCCGGCACCGTCGTCG GTCGGACGAAGCTCATCGCCGTCATTCGAATCGAAGAGACGGAGAACACACCATACACACTCACGCAAGCGATTGCCGCA GAGGACGAGACGTTGACAACGTTGACGATGCAAGAACGCATCAACGGTACGGTCACCTTCGCCGAGAACGGCTATAGCCG AAACTTTGAATTACCTCGTCATGCGTATGGCAGTCCGCTCCTTTCAGCATCCGGGCGAGTCGTCGCCATCCATTTGCGTG GGATCGCCTTGCCGACCGCATTATTTGAACAAGACATCCGTACGTTCATCGCAAAAGATGCACCGGCACCGCCACCCATC GAACTCGCACCGGTCGAACCAATCAAACCGGATTTGAACGAAGAACCGGTCGTCGTTCCAGAAGCACCACCTATTCCCGA GGCGCAACCGGACATCCCGCCGGCCACTGAACCGGAAGTTCCAGTTGAGGAAGAAGTCGAAGAGGAGGTTGTGGAAGAGC CCGAACCGACGACACCGGAAGTGACGCCGGAAGAACCTGCGGAACCGCCGAGTGAACCAGAAGAACCGACGGACCCACCG GAAACGGAAGAGCCGATTGAAGACGATCCCCCGGTAACCGAGCCGGAGGAACCGACCGAACCGGAAGAGCCAACGGAGCC GGAAGAACCGACGACGCTCGAACCAAACGGGGATGAGGACTCCATCGTCGAAGACGATCCGGACACTGAAGAAAACATAA ATGAAGAAGAAAACGACACAAGCACCCCATCTGAATGA
Upstream 100 bases:
>100_bases ACAACACAATTCATCCGAACACCTTCCAAAATATTTGTTTACCTCTTTCCAAATGAAGGAATAAGCATAGCATCGAACTT TATAGAAAGAAGGTGCCCCC
Downstream 100 bases:
>100_bases TGGAGTGCTTGTTATTCGTCACGTGTGAAACGTCGTTGGAGATTGCCGAGCACCGCTCCTAATCCGAGTAATAGAATCGA CAGCGCCCAAAACGGGAGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 385; Mature: 384
Protein sequence:
>385_residues MTCPHCGKKTRSKTVCPTCGRRSRRTIWLFAVPFAIALIAFVTFIGNAYFTDMLRSTDSLADQVNLPIGEETVSADEATP VDFAALQDSLFTVSYGTGFLVSSRDVVTAASNVAGLTNIIMYHDGEAVSGTVVGRTKLIAVIRIEETENTPYTLTQAIAA EDETLTTLTMQERINGTVTFAENGYSRNFELPRHAYGSPLLSASGRVVAIHLRGIALPTALFEQDIRTFIAKDAPAPPPI ELAPVEPIKPDLNEEPVVVPEAPPIPEAQPDIPPATEPEVPVEEEVEEEVVEEPEPTTPEVTPEEPAEPPSEPEEPTDPP ETEEPIEDDPPVTEPEEPTEPEEPTEPEEPTTLEPNGDEDSIVEDDPDTEENINEEENDTSTPSE
Sequences:
>Translated_385_residues MTCPHCGKKTRSKTVCPTCGRRSRRTIWLFAVPFAIALIAFVTFIGNAYFTDMLRSTDSLADQVNLPIGEETVSADEATP VDFAALQDSLFTVSYGTGFLVSSRDVVTAASNVAGLTNIIMYHDGEAVSGTVVGRTKLIAVIRIEETENTPYTLTQAIAA EDETLTTLTMQERINGTVTFAENGYSRNFELPRHAYGSPLLSASGRVVAIHLRGIALPTALFEQDIRTFIAKDAPAPPPI ELAPVEPIKPDLNEEPVVVPEAPPIPEAQPDIPPATEPEVPVEEEVEEEVVEEPEPTTPEVTPEEPAEPPSEPEEPTDPP ETEEPIEDDPPVTEPEEPTEPEEPTEPEEPTTLEPNGDEDSIVEDDPDTEENINEEENDTSTPSE >Mature_384_residues TCPHCGKKTRSKTVCPTCGRRSRRTIWLFAVPFAIALIAFVTFIGNAYFTDMLRSTDSLADQVNLPIGEETVSADEATPV DFAALQDSLFTVSYGTGFLVSSRDVVTAASNVAGLTNIIMYHDGEAVSGTVVGRTKLIAVIRIEETENTPYTLTQAIAAE DETLTTLTMQERINGTVTFAENGYSRNFELPRHAYGSPLLSASGRVVAIHLRGIALPTALFEQDIRTFIAKDAPAPPPIE LAPVEPIKPDLNEEPVVVPEAPPIPEAQPDIPPATEPEVPVEEEVEEEVVEEPEPTTPEVTPEEPAEPPSEPEEPTDPPE TEEPIEDDPPVTEPEEPTEPEEPTEPEEPTTLEPNGDEDSIVEDDPDTEENINEEENDTSTPSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41862; Mature: 41731
Theoretical pI: Translated: 3.70; Mature: 3.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPHCGKKTRSKTVCPTCGRRSRRTIWLFAVPFAIALIAFVTFIGNAYFTDMLRSTDSL CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADQVNLPIGEETVSADEATPVDFAALQDSLFTVSYGTGFLVSSRDVVTAASNVAGLTNII HHHCCCCCCCHHCCCCCCCCCHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHCCEEEE MYHDGEAVSGTVVGRTKLIAVIRIEETENTPYTLTQAIAAEDETLTTLTMQERINGTVTF EEECCCCCCEEEECCEEEEEEEEEECCCCCCEEHHHHHHCCCCCEEEEEHHHHCCEEEEE AENGYSRNFELPRHAYGSPLLSASGRVVAIHLRGIALPTALFEQDIRTFIAKDAPAPPPI ECCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCE ELAPVEPIKPDLNEEPVVVPEAPPIPEAQPDIPPATEPEVPVEEEVEEEVVEEPEPTTPE EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC VTPEEPAEPPSEPEEPTDPPETEEPIEDDPPVTEPEEPTEPEEPTEPEEPTTLEPNGDED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC SIVEDDPDTEENINEEENDTSTPSE CCCCCCCCCHHCCCCCCCCCCCCCC >Mature Secondary Structure TCPHCGKKTRSKTVCPTCGRRSRRTIWLFAVPFAIALIAFVTFIGNAYFTDMLRSTDSL CCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ADQVNLPIGEETVSADEATPVDFAALQDSLFTVSYGTGFLVSSRDVVTAASNVAGLTNII HHHCCCCCCCHHCCCCCCCCCHHHHHHCCEEEEECCCEEEEECCCHHHHHHHHHCCEEEE MYHDGEAVSGTVVGRTKLIAVIRIEETENTPYTLTQAIAAEDETLTTLTMQERINGTVTF EEECCCCCCEEEECCEEEEEEEEEECCCCCCEEHHHHHHCCCCCEEEEEHHHHCCEEEEE AENGYSRNFELPRHAYGSPLLSASGRVVAIHLRGIALPTALFEQDIRTFIAKDAPAPPPI ECCCCCCCCCCCHHHCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCE ELAPVEPIKPDLNEEPVVVPEAPPIPEAQPDIPPATEPEVPVEEEVEEEVVEEPEPTTPE EECCCCCCCCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCC VTPEEPAEPPSEPEEPTDPPETEEPIEDDPPVTEPEEPTEPEEPTEPEEPTTLEPNGDED CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCC SIVEDDPDTEENINEEENDTSTPSE CCCCCCCCCHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA