| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916873
Identifier: 229916873
GI number: 229916873
Start: 1114993
End: 1115904
Strand: Direct
Name: 229916873
Synonym: EAT1b_1146
Alternate gene names: NA
Gene position: 1114993-1115904 (Clockwise)
Preceding gene: 229916871
Following gene: 229916879
Centisome position: 37.17
GC content: 49.23
Gene sequence:
>912_bases ATGCCGAAAGATCCTCAGCTCGAACGTTTTGTATTACGTGTCTCGGTGTTCGCTTCTCTATTCTTCGCCATTTCTGGAAT CATTGTCGGTTACTATCTCTCCTCTGCCTTTATCCTATTCGACGGAATCTACTCGTTCTTGAGCGTCATCATGAGTTGGA TCTCTCTGCGAGCCGGGGTATTCATGCTGACGGCAGATAAACGATTCCCGTTCGGTAAAAGTACGATCGAACCGTTTATC ATCCTGTTTCAATACGGGGTGCTGCTCTATGTCATCGTCACCGCCTTCCTCGGAGCAATCGAGGATATTCGCGGTGGGGG GAATGAACTTGTGCTCGGAGGGGCACTCGTCTATTTGGCCATCAGCGCCGCATTGACCTATGGAATCTTTCGGTATTTAC GAACGTTTCAGTTGAAGGCGAGCTCTGGCCTCGTCAGTGCCGAGATTGTGCAGTGGCGACTCAGCTTCGTCTTGACGGGT GGGGCGCTCGTCGGATACTTGATTGCCCAAGTGCTCGTCTGGTTGTCCTTCGAGGCCATCTCGCCCTATGTGGACCCAGT CATGTTACTTCTCATCACGATGTGGTTGGTCAAGACACCGCTTATTGAGATGTGGACAGCCATCAAAGAGTTGATTGGGA TGAACACGGAGACTCCTTATAGTAAACAGATCACGCTGACCATCCTACAAGTCGCCCATCAATACGACGTCAACAAGACA TACGTCCGCACGACAAAGTCTGGGAATCTATTATTTATCGAGATTGATCTCGTCGTCCCGACCACTTATCGATACGACAA GATTGCCGATCAGGACATGATTCGTCAAAAGATGGAGGATGCTTTGGCTTTCTTACCTTATGAGAAATGGTTGACGATTT CGTTCACACACGACAACCGATGGGCAGAATAA
Upstream 100 bases:
>100_bases TCATGTGATAAACTTCCCTTTTTTATGTATGTATTAGATTTTAAGTGAACGGGAAAATATAGACCATCGATGGTCCGTCT TGTTCAAAGGGGGCACGCTT
Downstream 100 bases:
>100_bases AGGCGGATGACAACTGTCACCCGCCTGTTCCTCATCCTTCAAATGCCCGACGCAGCACTTCTTCTTCCTCTGCATTTCCG AGATTCCGATGCACCACTCG
Product: cation efflux protein
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Component; Cation Efflux Family Protein; Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cation Efflux Pump; Cation Efflux System Protein; Cobalt-Zinc-Cadmium Resistance Protein CzcD; Cation Efflux Transporter Protein; CDF Family Transporter
Number of amino acids: Translated: 303; Mature: 302
Protein sequence:
>303_residues MPKDPQLERFVLRVSVFASLFFAISGIIVGYYLSSAFILFDGIYSFLSVIMSWISLRAGVFMLTADKRFPFGKSTIEPFI ILFQYGVLLYVIVTAFLGAIEDIRGGGNELVLGGALVYLAISAALTYGIFRYLRTFQLKASSGLVSAEIVQWRLSFVLTG GALVGYLIAQVLVWLSFEAISPYVDPVMLLLITMWLVKTPLIEMWTAIKELIGMNTETPYSKQITLTILQVAHQYDVNKT YVRTTKSGNLLFIEIDLVVPTTYRYDKIADQDMIRQKMEDALAFLPYEKWLTISFTHDNRWAE
Sequences:
>Translated_303_residues MPKDPQLERFVLRVSVFASLFFAISGIIVGYYLSSAFILFDGIYSFLSVIMSWISLRAGVFMLTADKRFPFGKSTIEPFI ILFQYGVLLYVIVTAFLGAIEDIRGGGNELVLGGALVYLAISAALTYGIFRYLRTFQLKASSGLVSAEIVQWRLSFVLTG GALVGYLIAQVLVWLSFEAISPYVDPVMLLLITMWLVKTPLIEMWTAIKELIGMNTETPYSKQITLTILQVAHQYDVNKT YVRTTKSGNLLFIEIDLVVPTTYRYDKIADQDMIRQKMEDALAFLPYEKWLTISFTHDNRWAE >Mature_302_residues PKDPQLERFVLRVSVFASLFFAISGIIVGYYLSSAFILFDGIYSFLSVIMSWISLRAGVFMLTADKRFPFGKSTIEPFII LFQYGVLLYVIVTAFLGAIEDIRGGGNELVLGGALVYLAISAALTYGIFRYLRTFQLKASSGLVSAEIVQWRLSFVLTGG ALVGYLIAQVLVWLSFEAISPYVDPVMLLLITMWLVKTPLIEMWTAIKELIGMNTETPYSKQITLTILQVAHQYDVNKTY VRTTKSGNLLFIEIDLVVPTTYRYDKIADQDMIRQKMEDALAFLPYEKWLTISFTHDNRWAE
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34324; Mature: 34193
Theoretical pI: Translated: 6.55; Mature: 6.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPKDPQLERFVLRVSVFASLFFAISGIIVGYYLSSAFILFDGIYSFLSVIMSWISLRAGV CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FMLTADKRFPFGKSTIEPFIILFQYGVLLYVIVTAFLGAIEDIRGGGNELVLGGALVYLA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH ISAALTYGIFRYLRTFQLKASSGLVSAEIVQWRLSFVLTGGALVGYLIAQVLVWLSFEAI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPYVDPVMLLLITMWLVKTPLIEMWTAIKELIGMNTETPYSKQITLTILQVAHQYDVNKT CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC YVRTTKSGNLLFIEIDLVVPTTYRYDKIADQDMIRQKMEDALAFLPYEKWLTISFTHDNR EEEEECCCCEEEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCHHHEEEEEEECCCC WAE CCC >Mature Secondary Structure PKDPQLERFVLRVSVFASLFFAISGIIVGYYLSSAFILFDGIYSFLSVIMSWISLRAGV CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCE FMLTADKRFPFGKSTIEPFIILFQYGVLLYVIVTAFLGAIEDIRGGGNELVLGGALVYLA EEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHHHHHHH ISAALTYGIFRYLRTFQLKASSGLVSAEIVQWRLSFVLTGGALVGYLIAQVLVWLSFEAI HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SPYVDPVMLLLITMWLVKTPLIEMWTAIKELIGMNTETPYSKQITLTILQVAHQYDVNKT CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCC YVRTTKSGNLLFIEIDLVVPTTYRYDKIADQDMIRQKMEDALAFLPYEKWLTISFTHDNR EEEEECCCCEEEEEEEEEECCCCCHHHHCCHHHHHHHHHHHHHHCCHHHEEEEEEECCCC WAE CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA