| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is licA [H]
Identifier: 229916869
GI number: 229916869
Start: 1112898
End: 1113230
Strand: Direct
Name: licA [H]
Synonym: EAT1b_1142
Alternate gene names: 229916869
Gene position: 1112898-1113230 (Clockwise)
Preceding gene: 229916868
Following gene: 229916870
Centisome position: 37.1
GC content: 53.45
Gene sequence:
>333_bases GTGAAAACCGAAACCATCCAAGAACTCTCGTTTATGATTATCTTACATGCCGGAAATGCACGCTCATCTGCATTCGAGGC TATCGTTGCCGCGAAACGCGGTGAAGCGGACGAAGCGGCGGCAAAGTTGAAAGAAGCCGACGCAGCCTTCTTGGACGCAC ACAAGCTACAAACGGAGCTGTTACAAGAAGAGGCACGGGGGACGACGAGCGACATGAGCGTCCTCCTCGTCCACGCGCAA GACCACCTCATGACGGCGATGACCGTGAAAGAGCTCGCCGTCGAAATGATTGACATGATCACCCGTTTGAATCGATTGGA GGAAACGACATGA
Upstream 100 bases:
>100_bases CGACAGCGATGTATATTCCATTCGTCATGGCAGGAGCGAAGGCGATGACAGCCGAAATCAATAAAAATAAAGCTGCTACT GAGGAAGGAGAAAAGATTTC
Downstream 100 bases:
>100_bases ACATCTTACTCGTCTGCTCGGCAGGAATGTCGACATCGATCTTAGTGGAAAAAATGCGGAAGGAAGCTGCCGCACGCGGA CTCGACGCATCCATTGACGC
Product: phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
Products: protein histidine; sugar phosphate
Alternate protein names: EIIA-Lic; EIII-Lic; PTS system lichenan-specific EIIA component [H]
Number of amino acids: Translated: 110; Mature: 110
Protein sequence:
>110_residues MKTETIQELSFMIILHAGNARSSAFEAIVAAKRGEADEAAAKLKEADAAFLDAHKLQTELLQEEARGTTSDMSVLLVHAQ DHLMTAMTVKELAVEMIDMITRLNRLEETT
Sequences:
>Translated_110_residues MKTETIQELSFMIILHAGNARSSAFEAIVAAKRGEADEAAAKLKEADAAFLDAHKLQTELLQEEARGTTSDMSVLLVHAQ DHLMTAMTVKELAVEMIDMITRLNRLEETT >Mature_110_residues MKTETIQELSFMIILHAGNARSSAFEAIVAAKRGEADEAAAKLKEADAAFLDAHKLQTELLQEEARGTTSDMSVLLVHAQ DHLMTAMTVKELAVEMIDMITRLNRLEETT
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitant with their translocation across the cell membrane. This system i
COG id: COG1447
COG function: function code G; Phosphotransferase system cellobiose-specific component IIA
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIA type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788031, Length=100, Percent_Identity=38, Blast_Score=69, Evalue=8e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003188 [H]
Pfam domain/function: PF02255 PTS_IIA [H]
EC number: 2.7.1.69
Molecular weight: Translated: 12129; Mature: 12129
Theoretical pI: Translated: 4.62; Mature: 4.62
Prosite motif: PS51095 PTS_EIIA_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.4 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.4 %Met (Mature Protein) 6.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTETIQELSFMIILHAGNARSSAFEAIVAAKRGEADEAAAKLKEADAAFLDAHKLQTEL CCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LQEEARGTTSDMSVLLVHAQDHLMTAMTVKELAVEMIDMITRLNRLEETT HHHHHCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MKTETIQELSFMIILHAGNARSSAFEAIVAAKRGEADEAAAKLKEADAAFLDAHKLQTEL CCCHHHHHHHHEEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH LQEEARGTTSDMSVLLVHAQDHLMTAMTVKELAVEMIDMITRLNRLEETT HHHHHCCCCCCHHEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: protein N(pi)-phosphohistidine; sugar
Specific reaction: protein N(pi)-phosphohistidine + sugar = protein histidine + sugar phosphate
General reaction: Transferring phosphorus-containing groups [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8990303; 8969509; 9384377 [H]