| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
Click here to switch to the map view.
The map label for this gene is 229916827
Identifier: 229916827
GI number: 229916827
Start: 1068281
End: 1069936
Strand: Reverse
Name: 229916827
Synonym: EAT1b_1100
Alternate gene names: NA
Gene position: 1069936-1068281 (Counterclockwise)
Preceding gene: 229916828
Following gene: 229916826
Centisome position: 35.67
GC content: 47.58
Gene sequence:
>1656_bases ATGCAACGATGGTTGCGAATAACAGGATTGCTGATCCTTTTTAGTCTCTTCTCGTATTCAACAGTAGAGGCAGCCCTCGT CGTCGAGCCGAGCAGCTCAATCGATGTGGAGAATCCGAAGAACTATGTCGTGGGGAACGAACAGATGTATATTGGCGGAG AAGACGGATACCGGACGTATCAGTTGTCAGATGGTTCCCTTGTTCATCATGTGAAGGGACAAGCGACGGACGTATTGGAT GTCAGTGACGATGAGCAGTGGGTGCTCACGAAGCAGTCGTCAGGACTTGTGACATATGATGCCAAAGGAATGGAACGACA TACGTTACAAGAAGTGAAATGGGAGCATATGACGATTTCCTTCAATGACGATGAGATACAAGCTCGTTTCTTGCCGGGCT CATCGGTCGCCGTTATTCTAACGGAATCCTCGGACCTTGTTTGGTATGACGTCGCGACGAACGAAGTGAAGAAACAAGTA TTGATTAGTCGAAATGAACGATACGGCCCACCAAATCAACAGCTTCGTGTATCAAAGCACTTCATCGCGGTCGGTGAGAA GGCGATGATAGCCTTATATAGCCATGAAGGAGAGATGATGTCTTCGATAGGAATCGGAGATTTGATTGAATCTTTTGATG TGACGAATGATGGCATGGTTGTCATGACGACAAAGTCGGGAGCGTTGTATGAATATAAATGGAATGCGAAAGGTACATTT TCTCGAGAATTAGACATAACGGGCGCGATTATGATGAGTCCGAATGGAACGTTTTTCTCGAATGAGACGTCGCTCTATGA CTTCAAAACGGGCAAACGGATTTATTCTTCCGTTCAACCGGGACGTGTCGTGTTCACACCGGATTCGACTCGGTTTATTT CGATTGGGAAACGAATCGAGATTTATGACACGTCTTCACTCGACAAACGCATTCGCTCCATCGCGGTCAATCCAGAGTTG AAGCGAATTGAGACGGACACGAAGGTACGACCGAGTCTGATTGTCACACGTGCGGACGGTACGAAAGAGACGATCACAGA GGGCGTGACGTGGACGTCGACTTTTCCCGATCGGTTGGCGGTTGAAAAAGGGATGTTCGTCGGGAAACAATCGGGACCGG TCGTGGTGAATGCTACTTATGAAGAACACACGACCTTATTCCATGTGAAAGTGGTGCCGCCACCGCCACTCACGGACCTC GAGTGGTTGAAGGCGCATAAGAAATCCCTCGACCAACATGGAACATTTGATGGGGCGGACCATAAGATCGGAACATTGTA TGCGAAAGTGAAGGCCCCTGCCGGCAAGCTTTTAATCGACAAAAAGATAGCGACGAGAGGGAAGTATCACCATGATTTTA TGTACGCTGCGACGAACCGTTCCAAAAAAGTAAATGAGATTGTCCTCTCATTCTGGAACTACAAGCGTCCGAATATCACC GAGTCGGTCGTACAGCGCGCATTCGGGAAACCGATTCAAACCTGGACGAAGAAGTCTAAATCATTTGAGACGATAAGAGG AAACAAATCGTGGGAGAAGCGCTCTGTCGGAAAGATTGCTGCATACCGTACGAAACAAAAACATACGGTATGGATGTATT ACGATACGAGTGGGAAGTTGCGTATGTTCCGATTGTTTGAAAGTGCGCCGAAGTAA
Upstream 100 bases:
>100_bases GTCGAATCCTCTTTTAAAAAGGTTGGTTCTACAATGATGAGACCGATGGATTAATAAATGAGTTATGCGTTAGCAAATCA AACGAATGGATGTGAGTAAC
Downstream 100 bases:
>100_bases AGGGGAGCAGAGTGTTGAATGACTGGCATTCATCATGGAATGACTTTAGAGGATTCTAGGGTCATTTTTTTATAGGAAAA CAAGCGTTAGAGTCGACGAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 551; Mature: 551
Protein sequence:
>551_residues MQRWLRITGLLILFSLFSYSTVEAALVVEPSSSIDVENPKNYVVGNEQMYIGGEDGYRTYQLSDGSLVHHVKGQATDVLD VSDDEQWVLTKQSSGLVTYDAKGMERHTLQEVKWEHMTISFNDDEIQARFLPGSSVAVILTESSDLVWYDVATNEVKKQV LISRNERYGPPNQQLRVSKHFIAVGEKAMIALYSHEGEMMSSIGIGDLIESFDVTNDGMVVMTTKSGALYEYKWNAKGTF SRELDITGAIMMSPNGTFFSNETSLYDFKTGKRIYSSVQPGRVVFTPDSTRFISIGKRIEIYDTSSLDKRIRSIAVNPEL KRIETDTKVRPSLIVTRADGTKETITEGVTWTSTFPDRLAVEKGMFVGKQSGPVVVNATYEEHTTLFHVKVVPPPPLTDL EWLKAHKKSLDQHGTFDGADHKIGTLYAKVKAPAGKLLIDKKIATRGKYHHDFMYAATNRSKKVNEIVLSFWNYKRPNIT ESVVQRAFGKPIQTWTKKSKSFETIRGNKSWEKRSVGKIAAYRTKQKHTVWMYYDTSGKLRMFRLFESAPK
Sequences:
>Translated_551_residues MQRWLRITGLLILFSLFSYSTVEAALVVEPSSSIDVENPKNYVVGNEQMYIGGEDGYRTYQLSDGSLVHHVKGQATDVLD VSDDEQWVLTKQSSGLVTYDAKGMERHTLQEVKWEHMTISFNDDEIQARFLPGSSVAVILTESSDLVWYDVATNEVKKQV LISRNERYGPPNQQLRVSKHFIAVGEKAMIALYSHEGEMMSSIGIGDLIESFDVTNDGMVVMTTKSGALYEYKWNAKGTF SRELDITGAIMMSPNGTFFSNETSLYDFKTGKRIYSSVQPGRVVFTPDSTRFISIGKRIEIYDTSSLDKRIRSIAVNPEL KRIETDTKVRPSLIVTRADGTKETITEGVTWTSTFPDRLAVEKGMFVGKQSGPVVVNATYEEHTTLFHVKVVPPPPLTDL EWLKAHKKSLDQHGTFDGADHKIGTLYAKVKAPAGKLLIDKKIATRGKYHHDFMYAATNRSKKVNEIVLSFWNYKRPNIT ESVVQRAFGKPIQTWTKKSKSFETIRGNKSWEKRSVGKIAAYRTKQKHTVWMYYDTSGKLRMFRLFESAPK >Mature_551_residues MQRWLRITGLLILFSLFSYSTVEAALVVEPSSSIDVENPKNYVVGNEQMYIGGEDGYRTYQLSDGSLVHHVKGQATDVLD VSDDEQWVLTKQSSGLVTYDAKGMERHTLQEVKWEHMTISFNDDEIQARFLPGSSVAVILTESSDLVWYDVATNEVKKQV LISRNERYGPPNQQLRVSKHFIAVGEKAMIALYSHEGEMMSSIGIGDLIESFDVTNDGMVVMTTKSGALYEYKWNAKGTF SRELDITGAIMMSPNGTFFSNETSLYDFKTGKRIYSSVQPGRVVFTPDSTRFISIGKRIEIYDTSSLDKRIRSIAVNPEL KRIETDTKVRPSLIVTRADGTKETITEGVTWTSTFPDRLAVEKGMFVGKQSGPVVVNATYEEHTTLFHVKVVPPPPLTDL EWLKAHKKSLDQHGTFDGADHKIGTLYAKVKAPAGKLLIDKKIATRGKYHHDFMYAATNRSKKVNEIVLSFWNYKRPNIT ESVVQRAFGKPIQTWTKKSKSFETIRGNKSWEKRSVGKIAAYRTKQKHTVWMYYDTSGKLRMFRLFESAPK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 62365; Mature: 62365
Theoretical pI: Translated: 9.66; Mature: 9.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQRWLRITGLLILFSLFSYSTVEAALVVEPSSSIDVENPKNYVVGNEQMYIGGEDGYRTY CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCEEEECCCCCEEEE QLSDGSLVHHVKGQATDVLDVSDDEQWVLTKQSSGLVTYDAKGMERHTLQEVKWEHMTIS EECCCCEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHCCEEEEEEE FNDDEIQARFLPGSSVAVILTESSDLVWYDVATNEVKKQVLISRNERYGPPNQQLRVSKH ECCCCEEEEEECCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEE FIAVGEKAMIALYSHEGEMMSSIGIGDLIESFDVTNDGMVVMTTKSGALYEYKWNAKGTF EEEECCCEEEEEEECCCHHHHHCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCE SRELDITGAIMMSPNGTFFSNETSLYDFKTGKRIYSSVQPGRVVFTPDSTRFISIGKRIE EEEEEEEEEEEECCCCCEECCCCEEEEECCCHHHHHCCCCCEEEECCCCCEEEEECCEEE IYDTSSLDKRIRSIAVNPELKRIETDTKVRPSLIVTRADGTKETITEGVTWTSTFPDRLA EEECCHHHHHHHHEECCCCHHEECCCCCCCCEEEEEECCCCHHHHHCCCEEECCCCHHHH VEKGMFVGKQSGPVVVNATYEEHTTLFHVKVVPPPPLTDLEWLKAHKKSLDQHGTFDGAD HHCCCEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC HKIGTLYAKVKAPAGKLLIDKKIATRGKYHHDFMYAATNRSKKVNEIVLSFWNYKRPNIT CEEEEEEEEEECCCCCEEEECHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHH ESVVQRAFGKPIQTWTKKSKSFETIRGNKSWEKRSVGKIAAYRTKQKHTVWMYYDTSGKL HHHHHHHHCCCHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCEEEEEEECCCCCE RMFRLFESAPK EEEEEHHCCCC >Mature Secondary Structure MQRWLRITGLLILFSLFSYSTVEAALVVEPSSSIDVENPKNYVVGNEQMYIGGEDGYRTY CCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCEEECCCEEEECCCCCEEEE QLSDGSLVHHVKGQATDVLDVSDDEQWVLTKQSSGLVTYDAKGMERHTLQEVKWEHMTIS EECCCCEEEEECCCCCEEEECCCCCCEEEEECCCCEEEEECCCCCHHHHHHCCEEEEEEE FNDDEIQARFLPGSSVAVILTESSDLVWYDVATNEVKKQVLISRNERYGPPNQQLRVSKH ECCCCEEEEEECCCCEEEEEECCCCEEEEECCHHHHHHHHHHCCCCCCCCCCCCEEEEEE FIAVGEKAMIALYSHEGEMMSSIGIGDLIESFDVTNDGMVVMTTKSGALYEYKWNAKGTF EEEECCCEEEEEEECCCHHHHHCCHHHHHHHCCCCCCCEEEEEECCCEEEEEEECCCCCE SRELDITGAIMMSPNGTFFSNETSLYDFKTGKRIYSSVQPGRVVFTPDSTRFISIGKRIE EEEEEEEEEEEECCCCCEECCCCEEEEECCCHHHHHCCCCCEEEECCCCCEEEEECCEEE IYDTSSLDKRIRSIAVNPELKRIETDTKVRPSLIVTRADGTKETITEGVTWTSTFPDRLA EEECCHHHHHHHHEECCCCHHEECCCCCCCCEEEEEECCCCHHHHHCCCEEECCCCHHHH VEKGMFVGKQSGPVVVNATYEEHTTLFHVKVVPPPPLTDLEWLKAHKKSLDQHGTFDGAD HHCCCEEECCCCCEEEEEECCCCEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCC HKIGTLYAKVKAPAGKLLIDKKIATRGKYHHDFMYAATNRSKKVNEIVLSFWNYKRPNIT CEEEEEEEEEECCCCCEEEECHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCCCHH ESVVQRAFGKPIQTWTKKSKSFETIRGNKSWEKRSVGKIAAYRTKQKHTVWMYYDTSGKL HHHHHHHHCCCHHHHHHCCCCEEECCCCCCHHHHCCCCCEEEECCCCEEEEEEECCCCCE RMFRLFESAPK EEEEEHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA