| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916792
Identifier: 229916792
GI number: 229916792
Start: 1016414
End: 1018597
Strand: Reverse
Name: 229916792
Synonym: EAT1b_1065
Alternate gene names: NA
Gene position: 1018597-1016414 (Counterclockwise)
Preceding gene: 229916793
Following gene: 229916791
Centisome position: 33.95
GC content: 54.44
Gene sequence:
>2184_bases ATGACGAAGCAACCGCTACGGATCCTCGTATACGGGGACGTCAATTTGAACTTGATCGACGGCTCGGCCATCTGGCTCAC GTCGGTCGTGCATATGTTGAACCAGGACCCGAACATCGAAGTCGACGTGCTCTTGAAGCGCTCGATCGTGAAACCGGAAG TGACGGCGTCGATCAAACAGCTCGACCGCGTCCGCTTCATCGACGTCTTCACGGAAGACTCGACGAAGAAAGACGAGCCG TACTATGAGAAGAAGGTGCTCCAGCCGGAAGAGGCGGCCCAACTCATCCACGAGCTCGTCGAGACGAAACAGTATGACAT GACGTTCATCCGTGGGTTCCAGCTCGCCTATGCGCTCTCCGATTATGAACATACGATGAAAAAGACGTGGACGTATCTCA CGGATTTCACGCATGATTCATCGGCCGCGTCACAGGAAGAGTTGGCACGTCTGAAGAAGATTGCGGACCGTTCGGCTCGC ATGCTCTGTCAGACGGCGGAGATGAAGGCGTATTTCGAGACGTTTTTACAGACGCCGAAGCCGTTCCTCATCTTGAACCC GATGATCCCGAACATGCGCGAGGCGACGCCGACGTTCAAGCGTCAGGCGAAACGTCTCGTCTATACAGGAAAGTTCGCGC CACTCTGGTACTCGGCTGAAATTCTCGACGCGCTCGAGAAAGTACGAGTCCGGATGCCGGACGTCGAATTGAAAGTGGCG GGAGACAAGTTCAACCAAGACCCGAACAACCCGAACTTCCGTAAAGAAGTGACGCATCGTCTTCAAACGGACGAAGGGGT TCACTGGTTGAAAGGGATCCCGCGTGCGGACGTCGAGACGCTCATCGAAGAGAGCGACATCGGCATCTCGTGGCGTCACC CGGACCTTGACGACAGCCTCGAGTTGTCGACGAAGCTCCTCGAATATGGGGCGCTCGGGAAGCCGGTCCTTCTCAACCGC AACAAGATGCACGAGATGTTGCTCGGGTCGAGCTACCCGCTCTTCGTCAATTCGGAAGACGAGTTCATCGAAAAGGTCGA GCTCGCCTTCACCCATCCGGCCATCTATAAGGATGCGGCGGAACGTCTCTACAACATGGCGAAGAATTATTCGTTCGCCA GCACGTTCGAACGTCTCCGTGACGCGATTTGGGAGATGCAGAAGACGACGATCCTCTTCGCCGGTCACGACTTGAAGTTC ATCCGCATGTTCATGGAACGTTTCGAGGCCGACCCGAGCTACCGGGTCCTCGTCGACCAGTGGGACGGACACAAGATTCA TGATGTGAATCACAGCAAGGCATGTCTCGCGCAAGCAGACGTCATTTTCTGTGAATGGGGCCTCGGCAACGCCGTCTGGT ACTCGCAACATAAGTTGCCGCATCAGCGCCTCATCGTCCGGATTCATCGTCAGGAGAAAGAAACACCATTTCCACGGGAA TATGCGCTCGACAACATCGACCGCATCATCCTCGTCTCACCGTATATGTTAGAAGAGATGCATCGTCTCTTCGGGATTCC GCGTCACCAGATGACGGTCATCTACAACGCCGTCGATGCGGACAAGCTCGACAAACCGAAACAGGCGGACGATTTGACGT TCCGTCTCGGGATGATCGGCATGAACCCGAAACTGAAGCGTCCCGACCTCGCGCTCGACGTGCTCGAAGAGCTGCTGAAG ACGGACAAACGGTACCAGCTCCACTTTAAAGGGCACCATCCAAAAGATGTCTATTGGATCGGGAAACGGGAAGAGGAGAG CGCGTACTACGAGGCGCTATTGAAACGCATCGAAGAGTCGGACCTTCGTGACCACGTCCATTTCGATGGACACGGAAATG ACGTCGACACATGGCTCCAATCGATCGGCTTCGTCTTCTCAACGAGTGACTTGGAAAGTTTCCATCTCGCACCGGCCGAA GCGATGGCAGCAGGATCATACCCGCTCATCCGCCACTGGACGGGTGCGGAAACGATTTACCCAGACGAACTACTCGTCAC GGACACGTCGAAATTTGTCGATACGATCCTTTCTTATAAAGAAGAGAACGAGAAGCTGATGGCGGACGCAAAAGCCTATC AGGCGTATGCCCGTAAACATTTCGCGCTCGATCGTCTCTATCGAGAGATGGAACAAATCATTTCAGGCAAAACACACGAA CAATTTGCGACGACATTGTCATGA
Upstream 100 bases:
>100_bases AACTCGCTCGTTCCGGCAAACGCATCTTCAGTGTCGACCCGTATCAATATGTGAAAGCCGGTGCCGCCATGGATGAAGCG GACCGTCAGGAGGTAACGTT
Downstream 100 bases:
>100_bases AAATGTAATTGCACCAAAGAATTGTTCAAGAGTATAATGAGTATTGTTTTATTATCGAATGTGAAATAAAATGATGGACA ATGCGCTATTTAAAAAGCGC
Product: glycosyl transferase group 1
Products: NA
Alternate protein names: Methyltransferase Type; Galactosyltransferase-Related Protein; Glycosyl Transferase; TPR-Repeat-Containing Protein; TPR Repeat-Containing Glycosyltransferase; Tetratricopeptide TPR_2 Repeat Protein; Glycosyl Transferase Family Protein
Number of amino acids: Translated: 727; Mature: 726
Protein sequence:
>727_residues MTKQPLRILVYGDVNLNLIDGSAIWLTSVVHMLNQDPNIEVDVLLKRSIVKPEVTASIKQLDRVRFIDVFTEDSTKKDEP YYEKKVLQPEEAAQLIHELVETKQYDMTFIRGFQLAYALSDYEHTMKKTWTYLTDFTHDSSAASQEELARLKKIADRSAR MLCQTAEMKAYFETFLQTPKPFLILNPMIPNMREATPTFKRQAKRLVYTGKFAPLWYSAEILDALEKVRVRMPDVELKVA GDKFNQDPNNPNFRKEVTHRLQTDEGVHWLKGIPRADVETLIEESDIGISWRHPDLDDSLELSTKLLEYGALGKPVLLNR NKMHEMLLGSSYPLFVNSEDEFIEKVELAFTHPAIYKDAAERLYNMAKNYSFASTFERLRDAIWEMQKTTILFAGHDLKF IRMFMERFEADPSYRVLVDQWDGHKIHDVNHSKACLAQADVIFCEWGLGNAVWYSQHKLPHQRLIVRIHRQEKETPFPRE YALDNIDRIILVSPYMLEEMHRLFGIPRHQMTVIYNAVDADKLDKPKQADDLTFRLGMIGMNPKLKRPDLALDVLEELLK TDKRYQLHFKGHHPKDVYWIGKREEESAYYEALLKRIEESDLRDHVHFDGHGNDVDTWLQSIGFVFSTSDLESFHLAPAE AMAAGSYPLIRHWTGAETIYPDELLVTDTSKFVDTILSYKEENEKLMADAKAYQAYARKHFALDRLYREMEQIISGKTHE QFATTLS
Sequences:
>Translated_727_residues MTKQPLRILVYGDVNLNLIDGSAIWLTSVVHMLNQDPNIEVDVLLKRSIVKPEVTASIKQLDRVRFIDVFTEDSTKKDEP YYEKKVLQPEEAAQLIHELVETKQYDMTFIRGFQLAYALSDYEHTMKKTWTYLTDFTHDSSAASQEELARLKKIADRSAR MLCQTAEMKAYFETFLQTPKPFLILNPMIPNMREATPTFKRQAKRLVYTGKFAPLWYSAEILDALEKVRVRMPDVELKVA GDKFNQDPNNPNFRKEVTHRLQTDEGVHWLKGIPRADVETLIEESDIGISWRHPDLDDSLELSTKLLEYGALGKPVLLNR NKMHEMLLGSSYPLFVNSEDEFIEKVELAFTHPAIYKDAAERLYNMAKNYSFASTFERLRDAIWEMQKTTILFAGHDLKF IRMFMERFEADPSYRVLVDQWDGHKIHDVNHSKACLAQADVIFCEWGLGNAVWYSQHKLPHQRLIVRIHRQEKETPFPRE YALDNIDRIILVSPYMLEEMHRLFGIPRHQMTVIYNAVDADKLDKPKQADDLTFRLGMIGMNPKLKRPDLALDVLEELLK TDKRYQLHFKGHHPKDVYWIGKREEESAYYEALLKRIEESDLRDHVHFDGHGNDVDTWLQSIGFVFSTSDLESFHLAPAE AMAAGSYPLIRHWTGAETIYPDELLVTDTSKFVDTILSYKEENEKLMADAKAYQAYARKHFALDRLYREMEQIISGKTHE QFATTLS >Mature_726_residues TKQPLRILVYGDVNLNLIDGSAIWLTSVVHMLNQDPNIEVDVLLKRSIVKPEVTASIKQLDRVRFIDVFTEDSTKKDEPY YEKKVLQPEEAAQLIHELVETKQYDMTFIRGFQLAYALSDYEHTMKKTWTYLTDFTHDSSAASQEELARLKKIADRSARM LCQTAEMKAYFETFLQTPKPFLILNPMIPNMREATPTFKRQAKRLVYTGKFAPLWYSAEILDALEKVRVRMPDVELKVAG DKFNQDPNNPNFRKEVTHRLQTDEGVHWLKGIPRADVETLIEESDIGISWRHPDLDDSLELSTKLLEYGALGKPVLLNRN KMHEMLLGSSYPLFVNSEDEFIEKVELAFTHPAIYKDAAERLYNMAKNYSFASTFERLRDAIWEMQKTTILFAGHDLKFI RMFMERFEADPSYRVLVDQWDGHKIHDVNHSKACLAQADVIFCEWGLGNAVWYSQHKLPHQRLIVRIHRQEKETPFPREY ALDNIDRIILVSPYMLEEMHRLFGIPRHQMTVIYNAVDADKLDKPKQADDLTFRLGMIGMNPKLKRPDLALDVLEELLKT DKRYQLHFKGHHPKDVYWIGKREEESAYYEALLKRIEESDLRDHVHFDGHGNDVDTWLQSIGFVFSTSDLESFHLAPAEA MAAGSYPLIRHWTGAETIYPDELLVTDTSKFVDTILSYKEENEKLMADAKAYQAYARKHFALDRLYREMEQIISGKTHEQ FATTLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 84656; Mature: 84524
Theoretical pI: Translated: 6.16; Mature: 6.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKQPLRILVYGDVNLNLIDGSAIWLTSVVHMLNQDPNIEVDVLLKRSIVKPEVTASIKQ CCCCCEEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHH LDRVRFIDVFTEDSTKKDEPYYEKKVLQPEEAAQLIHELVETKQYDMTFIRGFQLAYALS HHHEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DYEHTMKKTWTYLTDFTHDSSAASQEELARLKKIADRSARMLCQTAEMKAYFETFLQTPK HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFLILNPMIPNMREATPTFKRQAKRLVYTGKFAPLWYSAEILDALEKVRVRMPDVELKVA CEEEECCCCCCHHHCCHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHCCCCEEEEEE GDKFNQDPNNPNFRKEVTHRLQTDEGVHWLKGIPRADVETLIEESDIGISWRHPDLDDSL CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCHH ELSTKLLEYGALGKPVLLNRNKMHEMLLGSSYPLFVNSEDEFIEKVELAFTHPAIYKDAA HHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHH ERLYNMAKNYSFASTFERLRDAIWEMQKTTILFAGHDLKFIRMFMERFEADPSYRVLVDQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC WDGHKIHDVNHSKACLAQADVIFCEWGLGNAVWYSQHKLPHQRLIVRIHRQEKETPFPRE CCCCEEECCCCCHHHHHHCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHH YALDNIDRIILVSPYMLEEMHRLFGIPRHQMTVIYNAVDADKLDKPKQADDLTFRLGMIG HHHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCCEEEEEEEEC MNPKLKRPDLALDVLEELLKTDKRYQLHFKGHHPKDVYWIGKREEESAYYEALLKRIEES CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHH DLRDHVHFDGHGNDVDTWLQSIGFVFSTSDLESFHLAPAEAMAAGSYPLIRHWTGAETIY HHHHCEEECCCCCCHHHHHHHHCCEEECCCCCHHCCCCHHHHHCCCCCCEEECCCCCCCC PDELLVTDTSKFVDTILSYKEENEKLMADAKAYQAYARKHFALDRLYREMEQIISGKTHE CCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QFATTLS HHHHHCC >Mature Secondary Structure TKQPLRILVYGDVNLNLIDGSAIWLTSVVHMLNQDPNIEVDVLLKRSIVKPEVTASIKQ CCCCEEEEEEECCEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEHHHCCCCHHHHHHHH LDRVRFIDVFTEDSTKKDEPYYEKKVLQPEEAAQLIHELVETKQYDMTFIRGFQLAYALS HHHEEEEEEEECCCCCCCCCHHHHHCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH DYEHTMKKTWTYLTDFTHDSSAASQEELARLKKIADRSARMLCQTAEMKAYFETFLQTPK HHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC PFLILNPMIPNMREATPTFKRQAKRLVYTGKFAPLWYSAEILDALEKVRVRMPDVELKVA CEEEECCCCCCHHHCCHHHHHHHHHEEEECCCCCCEECHHHHHHHHHHHHCCCCEEEEEE GDKFNQDPNNPNFRKEVTHRLQTDEGVHWLKGIPRADVETLIEESDIGISWRHPDLDDSL CCCCCCCCCCCCHHHHHHHHHCCCCCCHHHHCCCCHHHHHHHHHCCCCEEECCCCCCCHH ELSTKLLEYGALGKPVLLNRNKMHEMLLGSSYPLFVNSEDEFIEKVELAFTHPAIYKDAA HHHHHHHHHCCCCCCEEECCHHHHHHHHCCCCCEEECCHHHHHHHHHHHHCCCHHHHHHH ERLYNMAKNYSFASTFERLRDAIWEMQKTTILFAGHDLKFIRMFMERFEADPSYRVLVDQ HHHHHHHHCCCHHHHHHHHHHHHHHHHHCEEEEECCCHHHHHHHHHHHCCCCCEEEEEEC WDGHKIHDVNHSKACLAQADVIFCEWGLGNAVWYSQHKLPHQRLIVRIHRQEKETPFPRE CCCCEEECCCCCHHHHHHCCEEEEECCCCCCEEECCCCCCHHHHHHHHHHHCCCCCCCHH YALDNIDRIILVSPYMLEEMHRLFGIPRHQMTVIYNAVDADKLDKPKQADDLTFRLGMIG HHHCCCCEEEEECHHHHHHHHHHHCCCCCCEEEEEECCCHHCCCCCCCCCCEEEEEEEEC MNPKLKRPDLALDVLEELLKTDKRYQLHFKGHHPKDVYWIGKREEESAYYEALLKRIEES CCCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCCHHHHHHHHHHHHHHHH DLRDHVHFDGHGNDVDTWLQSIGFVFSTSDLESFHLAPAEAMAAGSYPLIRHWTGAETIY HHHHCEEECCCCCCHHHHHHHHCCEEECCCCCHHCCCCHHHHHCCCCCCEEECCCCCCCC PDELLVTDTSKFVDTILSYKEENEKLMADAKAYQAYARKHFALDRLYREMEQIISGKTHE CCCEEEECHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH QFATTLS HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA