| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916688
Identifier: 229916688
GI number: 229916688
Start: 907798
End: 908859
Strand: Reverse
Name: 229916688
Synonym: EAT1b_0961
Alternate gene names: NA
Gene position: 908859-907798 (Counterclockwise)
Preceding gene: 229916689
Following gene: 229916687
Centisome position: 30.3
GC content: 49.15
Gene sequence:
>1062_bases ATGGAACAAACGTACACCGCTGAAGAATTCAAAGAGAAGATGTACTCGAATTTAAAGGTACGCCCGAGTGATTCCGTTAT CCTCATGTGCTCCATCTTTATCGCGTCAATCGGATTGAATATGAACTCCATCCCCATCATTATCGGGGCCATGTTGATTT CGCCGCTCATGACGCCTATCCTGAGTATCGGTCTCGCTTTGTCGCTCTATGACATGAAACTTCTTCGAGCGGGTGTTCGT TTGTTGCTCGTCCAAGTCGCGGTCAGTCTCACCGTCGCGACCATTTATTTCGCCATCTCACCGATTACGTATGCGAGTAA TGAAATCATTGCCCGGACCGAACCGACGATTTGGGATGTCATCATCGCCTTCGCCGGGGGAACCGCCGGCATCATCGGGG CACAAAAGAAGATGAGTAACAACATCGTCCCAGGTGTCGCCATCGCGACCGCCTTGATGCCACCGCTCTGTACGGTCGGC TATTCGATTGCGACATGGAACGTCGATTATTTGATTGGGTCGAGTTATCTCTTCGTCATCAACTGTGCGTTCATCGCCAT TGCGACGTTCATCGGCGTCAAGTTCATGGGCATCTCGCAAGTGTTGACGAAACAAGACGCGAACCATAAAAAAATCAATC GACTTCTCATCGGGTTGTCTGTCCTCATCGTCGTCCCGAGTATCTTTTCGGCCACGACGCTCGTTCAAGACAGCATCGTC CGGACGGGAATCAACAATTTCATCGAAGAAGAGTTTTCAGAAGCCATCATTATCAGTCAGGACTATCAGAAAGATGATGA TTTGCTTCTCGTGACGACGACGGGGAAACGGTTGACCGAGGAAGAACTAGCCGATATTGAATCACGTCTGCCGGACTATG GGCTACATGCGATTGAATTGTCCGTGACACAAGTACCGGATCTGAACGGTTTATCTGGAGAACAGGCAGCTCGCATTTTA CAAGACTATCTCGAAAGTCGCCTGCAACAGTTCAACTTGTTCGACAGCCGTCAAATCGATTTGGAGGACTTGCCGTTCGA ACTGCAAAATGAGATGAATTAG
Upstream 100 bases:
>100_bases TCTTCTGTGGAAATCGATTGTCCTTTACAGGTTGCGGGTAAATATAGGAAGGACTTGCTTGTGTAGATGACATCGATACG ACAAGGGAGCTGAACGCTAT
Downstream 100 bases:
>100_bases TATTTTGATTATTTTTAATTATGGATTGGTGATTGAAAATGATTTCTTTATATGAGCTAGATGATCATCACATTTCCCTT TCATTTAAAAAGGTAACTGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 353; Mature: 353
Protein sequence:
>353_residues MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN
Sequences:
>Translated_353_residues MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN >Mature_353_residues MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN
Specific function: Unknown
COG id: COG1808
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005233 - InterPro: IPR013031 - InterPro: IPR005240 [H]
Pfam domain/function: PF04087 DUF389 [H]
EC number: NA
Molecular weight: Translated: 38827; Mature: 38827
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPI CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LSIGLALSLYDMKLLRAGVRLLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCHHHHH IIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVGYSIATWNVDYLIGSSYLFVI HHHHCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCHHHHCCCEEEEEEEHHHHCCCHHHHH NCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIEL HHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE SVTQVPDLNGLSGEQAARILQDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC >Mature Secondary Structure MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPI CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH LSIGLALSLYDMKLLRAGVRLLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCHHHHH IIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVGYSIATWNVDYLIGSSYLFVI HHHHCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCHHHHCCCEEEEEEEHHHHCCCHHHHH NCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIEL HHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE SVTQVPDLNGLSGEQAARILQDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]