Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is 229916688

Identifier: 229916688

GI number: 229916688

Start: 907798

End: 908859

Strand: Reverse

Name: 229916688

Synonym: EAT1b_0961

Alternate gene names: NA

Gene position: 908859-907798 (Counterclockwise)

Preceding gene: 229916689

Following gene: 229916687

Centisome position: 30.3

GC content: 49.15

Gene sequence:

>1062_bases
ATGGAACAAACGTACACCGCTGAAGAATTCAAAGAGAAGATGTACTCGAATTTAAAGGTACGCCCGAGTGATTCCGTTAT
CCTCATGTGCTCCATCTTTATCGCGTCAATCGGATTGAATATGAACTCCATCCCCATCATTATCGGGGCCATGTTGATTT
CGCCGCTCATGACGCCTATCCTGAGTATCGGTCTCGCTTTGTCGCTCTATGACATGAAACTTCTTCGAGCGGGTGTTCGT
TTGTTGCTCGTCCAAGTCGCGGTCAGTCTCACCGTCGCGACCATTTATTTCGCCATCTCACCGATTACGTATGCGAGTAA
TGAAATCATTGCCCGGACCGAACCGACGATTTGGGATGTCATCATCGCCTTCGCCGGGGGAACCGCCGGCATCATCGGGG
CACAAAAGAAGATGAGTAACAACATCGTCCCAGGTGTCGCCATCGCGACCGCCTTGATGCCACCGCTCTGTACGGTCGGC
TATTCGATTGCGACATGGAACGTCGATTATTTGATTGGGTCGAGTTATCTCTTCGTCATCAACTGTGCGTTCATCGCCAT
TGCGACGTTCATCGGCGTCAAGTTCATGGGCATCTCGCAAGTGTTGACGAAACAAGACGCGAACCATAAAAAAATCAATC
GACTTCTCATCGGGTTGTCTGTCCTCATCGTCGTCCCGAGTATCTTTTCGGCCACGACGCTCGTTCAAGACAGCATCGTC
CGGACGGGAATCAACAATTTCATCGAAGAAGAGTTTTCAGAAGCCATCATTATCAGTCAGGACTATCAGAAAGATGATGA
TTTGCTTCTCGTGACGACGACGGGGAAACGGTTGACCGAGGAAGAACTAGCCGATATTGAATCACGTCTGCCGGACTATG
GGCTACATGCGATTGAATTGTCCGTGACACAAGTACCGGATCTGAACGGTTTATCTGGAGAACAGGCAGCTCGCATTTTA
CAAGACTATCTCGAAAGTCGCCTGCAACAGTTCAACTTGTTCGACAGCCGTCAAATCGATTTGGAGGACTTGCCGTTCGA
ACTGCAAAATGAGATGAATTAG

Upstream 100 bases:

>100_bases
TCTTCTGTGGAAATCGATTGTCCTTTACAGGTTGCGGGTAAATATAGGAAGGACTTGCTTGTGTAGATGACATCGATACG
ACAAGGGAGCTGAACGCTAT

Downstream 100 bases:

>100_bases
TATTTTGATTATTTTTAATTATGGATTGGTGATTGAAAATGATTTCTTTATATGAGCTAGATGATCATCACATTTCCCTT
TCATTTAAAAAGGTAACTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR
LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG
YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV
RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL
QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN

Sequences:

>Translated_353_residues
MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR
LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG
YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV
RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL
QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN
>Mature_353_residues
MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPILSIGLALSLYDMKLLRAGVR
LLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDVIIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVG
YSIATWNVDYLIGSSYLFVINCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV
RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIELSVTQVPDLNGLSGEQAARIL
QDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN

Specific function: Unknown

COG id: COG1808

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005233
- InterPro:   IPR013031
- InterPro:   IPR005240 [H]

Pfam domain/function: PF04087 DUF389 [H]

EC number: NA

Molecular weight: Translated: 38827; Mature: 38827

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPI
CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LSIGLALSLYDMKLLRAGVRLLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCHHHHH
IIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVGYSIATWNVDYLIGSSYLFVI
HHHHCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCHHHHCCCEEEEEEEHHHHCCCHHHHH
NCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIEL
HHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE
SVTQVPDLNGLSGEQAARILQDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC
>Mature Secondary Structure
MEQTYTAEEFKEKMYSNLKVRPSDSVILMCSIFIASIGLNMNSIPIIIGAMLISPLMTPI
CCCCCCHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
LSIGLALSLYDMKLLRAGVRLLLVQVAVSLTVATIYFAISPITYASNEIIARTEPTIWDV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCEEECCCCHHHHH
IIAFAGGTAGIIGAQKKMSNNIVPGVAIATALMPPLCTVGYSIATWNVDYLIGSSYLFVI
HHHHCCCCCHHHCCHHHHCCCCCCHHHHHHHHHCHHHHCCCEEEEEEEHHHHCCCHHHHH
NCAFIAIATFIGVKFMGISQVLTKQDANHKKINRLLIGLSVLIVVPSIFSATTLVQDSIV
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RTGINNFIEEEFSEAIIISQDYQKDDDLLLVTTTGKRLTEEELADIESRLPDYGLHAIEL
HHHHHHHHHHHHHCEEEEECCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCEEEEE
SVTQVPDLNGLSGEQAARILQDYLESRLQQFNLFDSRQIDLEDLPFELQNEMN
EEEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]