Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is yhaP [H]

Identifier: 229916682

GI number: 229916682

Start: 902189

End: 903382

Strand: Direct

Name: yhaP [H]

Synonym: EAT1b_0955

Alternate gene names: 229916682

Gene position: 902189-903382 (Clockwise)

Preceding gene: 229916681

Following gene: 229916683

Centisome position: 30.07

GC content: 52.93

Gene sequence:

>1194_bases
ATGTTTCATAACTTTGGACCACTCTATGCGTTCACACTCAAATCGAGAATTCGTTCGAAAGCATTCCTCATCTCGACGGC
GTTGACGATCCTGTTCATCTTCGGGTTTACGAACATCGACCGCATCATGTCCTCCTTCGAGGACTCTGAACAGGCGAGTG
CTCTCGTCGTATCTGAAAACACAGAACTCGTCGACACGATGAAGTCTCTCGGCTATGAAGACGTCGCCTCTAGCGAAATC
ACGGAAGAAGAGGCGCGGGCCGGCATCAATGACGGGGAATACGGCGTCGTCGCCTTTGTTGACGGCTATGATGCCCGCGT
CATCTCCGAACGCCCGGAACAGGAGTTCACGACTCTTTTACAAACATCCTTACAACAGTTACGCAATGCGGAATTGATCG
AATCGTCCGATGTCGACCCGGCCGTCATCGCTGCCCTCAGCGAACCGATTCAACTCGACGAGTCCTATCTCGGACGCGGT
GGAGAGAACTCGGATGAGCTCCTCTCGTCCTCGGCGCTCGTTTACGTCATGTTGATGCTCTTGTACATCTCGATCATCAC
GTACGGATCGATGATTTCAACAGAAGTGACGACGGAGAAGTCATCGCGTGTCATGGAGCTCATCATCTCGACGACTCATC
CGGTGACCCATATGCTTGCGAAAGTGACCGCCATCGGGACGCTTGCCCTCATCCAAATCGGAATCTTCCTCGGGTTTGGT
TATGTGAGTGCGAGTGGTAGCGAACTGGCGACGACGGTCATCGAGAACGCCGGCAACGCACGGGCCGTCATCTATCTACT
CGTCTTCTTCTTGCTCGGATACTTGTTGTACGCCTCACTCTTCGCCGTCCTCGGCTCACTCGTCAGCCGAGTCGAAGAGT
CACAACAAATGGTCATGCCGGTCATCATGCTCCTCGTCGCCGCATTCTTAGTGGCGATGTTCGGTTTGAACAACCCGGAT
GCGACCATCGTGACCATCCTCTCATTCGTCCCGTTTTTCGCTCCGATGCTCATGTTCCTTCGCGTCATGCTCGTCGATGT
GGCCGTATGGGAAGTGGCGCTCTCCATCGGGTTACTCATCGGAACGATCGGTGTCACGTTGTGGATTGGATCGAAATTCT
ATCGTGGTGGCGTCTTGTTCTATGGAACGAACGCCATTAAACAATGGCGACAAATATTACAAAACCGTCAATAA

Upstream 100 bases:

>100_bases
GCCGTCCTATCGGCACTCGTCCGTCATCAGGCGAACGTGAAGACGTTCATGCGCCAACCGGTATCGCTCAATGACATCTT
CATCAAGGAGGTCGGACAGC

Downstream 100 bases:

>100_bases
CGTTTACAGCAAATTCGTTTTCGTTTACTCTAAAGAATGTGCAAAATGAGGAGGAAAACGAACTATGCGATCACGATTAC
TCGCAGCCTTAATCTTTACG

Product: ABC transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 397; Mature: 397

Protein sequence:

>397_residues
MFHNFGPLYAFTLKSRIRSKAFLISTALTILFIFGFTNIDRIMSSFEDSEQASALVVSENTELVDTMKSLGYEDVASSEI
TEEEARAGINDGEYGVVAFVDGYDARVISERPEQEFTTLLQTSLQQLRNAELIESSDVDPAVIAALSEPIQLDESYLGRG
GENSDELLSSSALVYVMLMLLYISIITYGSMISTEVTTEKSSRVMELIISTTHPVTHMLAKVTAIGTLALIQIGIFLGFG
YVSASGSELATTVIENAGNARAVIYLLVFFLLGYLLYASLFAVLGSLVSRVEESQQMVMPVIMLLVAAFLVAMFGLNNPD
ATIVTILSFVPFFAPMLMFLRVMLVDVAVWEVALSIGLLIGTIGVTLWIGSKFYRGGVLFYGTNAIKQWRQILQNRQ

Sequences:

>Translated_397_residues
MFHNFGPLYAFTLKSRIRSKAFLISTALTILFIFGFTNIDRIMSSFEDSEQASALVVSENTELVDTMKSLGYEDVASSEI
TEEEARAGINDGEYGVVAFVDGYDARVISERPEQEFTTLLQTSLQQLRNAELIESSDVDPAVIAALSEPIQLDESYLGRG
GENSDELLSSSALVYVMLMLLYISIITYGSMISTEVTTEKSSRVMELIISTTHPVTHMLAKVTAIGTLALIQIGIFLGFG
YVSASGSELATTVIENAGNARAVIYLLVFFLLGYLLYASLFAVLGSLVSRVEESQQMVMPVIMLLVAAFLVAMFGLNNPD
ATIVTILSFVPFFAPMLMFLRVMLVDVAVWEVALSIGLLIGTIGVTLWIGSKFYRGGVLFYGTNAIKQWRQILQNRQ
>Mature_397_residues
MFHNFGPLYAFTLKSRIRSKAFLISTALTILFIFGFTNIDRIMSSFEDSEQASALVVSENTELVDTMKSLGYEDVASSEI
TEEEARAGINDGEYGVVAFVDGYDARVISERPEQEFTTLLQTSLQQLRNAELIESSDVDPAVIAALSEPIQLDESYLGRG
GENSDELLSSSALVYVMLMLLYISIITYGSMISTEVTTEKSSRVMELIISTTHPVTHMLAKVTAIGTLALIQIGIFLGFG
YVSASGSELATTVIENAGNARAVIYLLVFFLLGYLLYASLFAVLGSLVSRVEESQQMVMPVIMLLVAAFLVAMFGLNNPD
ATIVTILSFVPFFAPMLMFLRVMLVDVAVWEVALSIGLLIGTIGVTLWIGSKFYRGGVLFYGTNAIKQWRQILQNRQ

Specific function: Unknown

COG id: COG1668

COG function: function code CP; ABC-type Na+ efflux pump, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.jannaschii MJ1024 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43568; Mature: 43568

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFHNFGPLYAFTLKSRIRSKAFLISTALTILFIFGFTNIDRIMSSFEDSEQASALVVSEN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCEEEEECC
TELVDTMKSLGYEDVASSEITEEEARAGINDGEYGVVAFVDGYDARVISERPEQEFTTLL
HHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHH
QTSLQQLRNAELIESSDVDPAVIAALSEPIQLDESYLGRGGENSDELLSSSALVYVMLML
HHHHHHHHCCHHHCCCCCCHHHHHHHHCCHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYISIITYGSMISTEVTTEKSSRVMELIISTTHPVTHMLAKVTAIGTLALIQIGIFLGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSASGSELATTVIENAGNARAVIYLLVFFLLGYLLYASLFAVLGSLVSRVEESQQMVMP
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIMLLVAAFLVAMFGLNNPDATIVTILSFVPFFAPMLMFLRVMLVDVAVWEVALSIGLLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTIGVTLWIGSKFYRGGVLFYGTNAIKQWRQILQNRQ
HHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHCCCC
>Mature Secondary Structure
MFHNFGPLYAFTLKSRIRSKAFLISTALTILFIFGFTNIDRIMSSFEDSEQASALVVSEN
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCHHHCCEEEEECC
TELVDTMKSLGYEDVASSEITEEEARAGINDGEYGVVAFVDGYDARVISERPEQEFTTLL
HHHHHHHHHCCCHHHHHHHCCHHHHHCCCCCCCEEEEEEECCCCCHHHCCCCHHHHHHHH
QTSLQQLRNAELIESSDVDPAVIAALSEPIQLDESYLGRGGENSDELLSSSALVYVMLML
HHHHHHHHCCHHHCCCCCCHHHHHHHHCCHHCCHHHCCCCCCCHHHHHHHHHHHHHHHHH
LYISIITYGSMISTEVTTEKSSRVMELIISTTHPVTHMLAKVTAIGTLALIQIGIFLGFG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
YVSASGSELATTVIENAGNARAVIYLLVFFLLGYLLYASLFAVLGSLVSRVEESQQMVMP
HHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIMLLVAAFLVAMFGLNNPDATIVTILSFVPFFAPMLMFLRVMLVDVAVWEVALSIGLLI
HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GTIGVTLWIGSKFYRGGVLFYGTNAIKQWRQILQNRQ
HHHHHHHHHCCHHHCCCEEEECCHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]