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The map label for this gene is lytR [H]

Identifier: 229916673

GI number: 229916673

Start: 893650

End: 894657

Strand: Direct

Name: lytR [H]

Synonym: EAT1b_0945

Alternate gene names: 229916673

Gene position: 893650-894657 (Clockwise)

Preceding gene: 229916672

Following gene: 229916679

Centisome position: 29.79

GC content: 53.67

Gene sequence:

>1008_bases
ATGGAAACACCCCCACGCAAGAAAAGATCACCTTGGAAAATTGTCCTCATCGTGTTGGGTGTCGTATTGCTGATCGGTGG
TTCCGCTTTCGGCTATTTTGTCTTCAAAGCGAATGAAACCGCCGAAAACGCGAACAAGGCGTTGGAACGTGGCGATAAGT
CAGAACGTCGCGACGAGACCATCGACTTGACGAAAGATCACTTTTCCGTCCTGTTAGCAGGAGTCGATGGCGGCGCCTCG
CTCGAGGAAGGACGGACCGATTCGCTCATGGTCGCCACGTTCAACAAGGAATCGCGGCAAGTGACGCTCGTCAGCATCCC
ACGTGACTCGTATGTCGACATCATCATTGACAATGAGGATCCATTCAAAGACAAGATCAACCATGCGTATGCTTACGGAG
GAATCGACACGACCATCGCGACCGTCGAGAACTTGCTCGACATCCCGATCGATTACTATGCGACCATTAACTTTGATGGA
ATCGAAGATTTGGTCGATGCGGTTGGTGGCGTCGAGATTGACGTCCTCATCCCTATCTCCGGTAGAGCGACCGGAAATGT
CGAGCTAGAGCCTGGCGTTCAAGTCTTGAACGGAAAAGAAGCACTCGCTTACGCTCGGATGCGGAAGCAAGACCCTGCCG
GCGACATCGGTCGAGCCGGTCGACAACAGCAAGTCATCGAGGCCATCATCAATGAGGCGACGACCATCAACTCGTTTACG
AAGCTGAACCGGATCATGAATGCCGTCGGCGAGAACATCCGGACGAACATGACGTTGTCAGAGGCCTCACAACTTCAGCC
GTACGCAAAGTCGCTGAAGTCGTTCAACCGCGAAACACTCGAAGGGACTGATTTGACGCTGAACGGGGTCTACTATTATG
AAATCGACCCGGCTGACCTTCGTGACGCCCAGGCCCTTCTCCAGACGGAGCTCGGGATGCCCGTCACGGCGGACGAACCG
TCAACCGATGAAACGGACGATTCGATGACCGAAACGATCACGTACTAA

Upstream 100 bases:

>100_bases
GTCAAGGTCAGCTTCAAACTCATACAATCCGCATCATCGAACGTGATTTCAAACGCTGAAACCCCTATACTAAAAGAAAC
GACTGAAATGAGGAAACAAC

Downstream 100 bases:

>100_bases
AACAAATAATAGCCAGTATCGCGCGGCGATACTGGCTATTATTTAGGTTCGCGGTCGACCGAGCAGTCGTCGGGACGTGC
GAATGATTGGTTTATAGTTC

Product: cell envelope-related transcriptional attenuator

Products: NA

Alternate protein names: Membrane-bound protein lytR [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
METPPRKKRSPWKIVLIVLGVVLLIGGSAFGYFVFKANETAENANKALERGDKSERRDETIDLTKDHFSVLLAGVDGGAS
LEEGRTDSLMVATFNKESRQVTLVSIPRDSYVDIIIDNEDPFKDKINHAYAYGGIDTTIATVENLLDIPIDYYATINFDG
IEDLVDAVGGVEIDVLIPISGRATGNVELEPGVQVLNGKEALAYARMRKQDPAGDIGRAGRQQQVIEAIINEATTINSFT
KLNRIMNAVGENIRTNMTLSEASQLQPYAKSLKSFNRETLEGTDLTLNGVYYYEIDPADLRDAQALLQTELGMPVTADEP
STDETDDSMTETITY

Sequences:

>Translated_335_residues
METPPRKKRSPWKIVLIVLGVVLLIGGSAFGYFVFKANETAENANKALERGDKSERRDETIDLTKDHFSVLLAGVDGGAS
LEEGRTDSLMVATFNKESRQVTLVSIPRDSYVDIIIDNEDPFKDKINHAYAYGGIDTTIATVENLLDIPIDYYATINFDG
IEDLVDAVGGVEIDVLIPISGRATGNVELEPGVQVLNGKEALAYARMRKQDPAGDIGRAGRQQQVIEAIINEATTINSFT
KLNRIMNAVGENIRTNMTLSEASQLQPYAKSLKSFNRETLEGTDLTLNGVYYYEIDPADLRDAQALLQTELGMPVTADEP
STDETDDSMTETITY
>Mature_335_residues
METPPRKKRSPWKIVLIVLGVVLLIGGSAFGYFVFKANETAENANKALERGDKSERRDETIDLTKDHFSVLLAGVDGGAS
LEEGRTDSLMVATFNKESRQVTLVSIPRDSYVDIIIDNEDPFKDKINHAYAYGGIDTTIATVENLLDIPIDYYATINFDG
IEDLVDAVGGVEIDVLIPISGRATGNVELEPGVQVLNGKEALAYARMRKQDPAGDIGRAGRQQQVIEAIINEATTINSFT
KLNRIMNAVGENIRTNMTLSEASQLQPYAKSLKSFNRETLEGTDLTLNGVYYYEIDPADLRDAQALLQTELGMPVTADEP
STDETDDSMTETITY

Specific function: Attenuator role for operon expression [H]

COG id: COG1316

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LytR/CpsA/Psr regulatory protein family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004474 [H]

Pfam domain/function: PF03816 LytR_cpsA_psr [H]

EC number: NA

Molecular weight: Translated: 36808; Mature: 36808

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPPRKKRSPWKIVLIVLGVVLLIGGSAFGYFVFKANETAENANKALERGDKSERRDET
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHCCCC
IDLTKDHFSVLLAGVDGGASLEEGRTDSLMVATFNKESRQVTLVSIPRDSYVDIIIDNED
CCCCHHCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCC
PFKDKINHAYAYGGIDTTIATVENLLDIPIDYYATINFDGIEDLVDAVGGVEIDVLIPIS
CHHHHHCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEEEEEEEC
GRATGNVELEPGVQVLNGKEALAYARMRKQDPAGDIGRAGRQQQVIEAIINEATTINSFT
CCCCCCEEECCCCEEECCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
KLNRIMNAVGENIRTNMTLSEASQLQPYAKSLKSFNRETLEGTDLTLNGVYYYEIDPADL
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCHHH
RDAQALLQTELGMPVTADEPSTDETDDSMTETITY
HHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure
METPPRKKRSPWKIVLIVLGVVLLIGGSAFGYFVFKANETAENANKALERGDKSERRDET
CCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEECCCHHHHHHHHHCCCCHHHCCCC
IDLTKDHFSVLLAGVDGGASLEEGRTDSLMVATFNKESRQVTLVSIPRDSYVDIIIDNED
CCCCHHCEEEEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEECCCCEEEEEECCCC
PFKDKINHAYAYGGIDTTIATVENLLDIPIDYYATINFDGIEDLVDAVGGVEIDVLIPIS
CHHHHHCCEEEECCCHHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHCCCEEEEEEEEC
GRATGNVELEPGVQVLNGKEALAYARMRKQDPAGDIGRAGRQQQVIEAIINEATTINSFT
CCCCCCEEECCCCEEECCHHHHHHHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHH
KLNRIMNAVGENIRTNMTLSEASQLQPYAKSLKSFNRETLEGTDLTLNGVYYYEIDPADL
HHHHHHHHHCCCCCCCCCHHHHHHCCHHHHHHHHCCCCCCCCCCEEECCEEEEEECCHHH
RDAQALLQTELGMPVTADEPSTDETDDSMTETITY
HHHHHHHHHHCCCCEECCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA