| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916637
Identifier: 229916637
GI number: 229916637
Start: 863463
End: 864089
Strand: Reverse
Name: 229916637
Synonym: EAT1b_0909
Alternate gene names: NA
Gene position: 864089-863463 (Counterclockwise)
Preceding gene: 229916638
Following gene: 229916636
Centisome position: 28.8
GC content: 49.92
Gene sequence:
>627_bases ATGAACATGAAACGATTTGGCTTACTGGTGGCGGTACCGCTCGCACTACTTGTCGGTTGCGGGGAAGCAGACGAACTGAA GACGACGGCGACGGATACGGAAGAAGTCGTAGAGGCGGAAGCGAGTACGGCTGAAGAATCATCAACTGAAGAAACGGGCG TTCAAGAGAGTGAACTCGGCACAAACAAGATTTATATGAAGAATAAGGCACTCACGATCACAGAGACGATGGGTCCGATT CAATTCGCCATCGACAAAGTACAGACGTCACGCCTCACGGTCGCAGAAGCTTATAGCGACTCATTCGATGGACAAGAAGA GGTGACGGTCGTCGCGATGAACATGATTGTTGAGAACACGGTCGACGAGACGATGAGCTTCCATCCGAACCAGGCGACAC TGGTGACGAACACAGGGGAGCAGGTGTCTTCGGACTTATGGTTCTCAGATGACGTCGGTGGAGAATTTTTAGGAAAGGTG AAGAAAGAAGGGAACGTCCTCTTCTTCGTGAAAGCAAAACCAGAAGAGCTGACGGACTTGAAAGTCGTCATCGATGGACC ATTCAACGAGAACTTCGACAAAGTGGCGGAAGATCGCTACGAATACACGATTGACGTTACGAAATGA
Upstream 100 bases:
>100_bases TTTATTTTACCTGGAACTTTTTCTTAATACGGTACCGTCTGTCAATTCGTTATATTCGTCTTAACCACATCACTTTGATT TTGGAAAGGGAGAGATGAAG
Downstream 100 bases:
>100_bases AAGTAGGCGTGCCGAGTGATACCGGCACGCTTTTTCAACTTATTTTTTCCTTTCAATCAGACGATATGGATTAAATTGAG TTATAAGAACAATCTGAAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MNMKRFGLLVAVPLALLVGCGEADELKTTATDTEEVVEAEASTAEESSTEETGVQESELGTNKIYMKNKALTITETMGPI QFAIDKVQTSRLTVAEAYSDSFDGQEEVTVVAMNMIVENTVDETMSFHPNQATLVTNTGEQVSSDLWFSDDVGGEFLGKV KKEGNVLFFVKAKPEELTDLKVVIDGPFNENFDKVAEDRYEYTIDVTK
Sequences:
>Translated_208_residues MNMKRFGLLVAVPLALLVGCGEADELKTTATDTEEVVEAEASTAEESSTEETGVQESELGTNKIYMKNKALTITETMGPI QFAIDKVQTSRLTVAEAYSDSFDGQEEVTVVAMNMIVENTVDETMSFHPNQATLVTNTGEQVSSDLWFSDDVGGEFLGKV KKEGNVLFFVKAKPEELTDLKVVIDGPFNENFDKVAEDRYEYTIDVTK >Mature_208_residues MNMKRFGLLVAVPLALLVGCGEADELKTTATDTEEVVEAEASTAEESSTEETGVQESELGTNKIYMKNKALTITETMGPI QFAIDKVQTSRLTVAEAYSDSFDGQEEVTVVAMNMIVENTVDETMSFHPNQATLVTNTGEQVSSDLWFSDDVGGEFLGKV KKEGNVLFFVKAKPEELTDLKVVIDGPFNENFDKVAEDRYEYTIDVTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22874; Mature: 22874
Theoretical pI: Translated: 3.96; Mature: 3.96
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNMKRFGLLVAVPLALLVGCGEADELKTTATDTEEVVEAEASTAEESSTEETGVQESELG CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHHCC TNKIYMKNKALTITETMGPIQFAIDKVQTSRLTVAEAYSDSFDGQEEVTVVAMNMIVENT CCEEEEECCEEEEEECCCHHHHHHHHHHHHHEEEEHHHCCCCCCCCCEEEEEEHHHHHHH VDETMSFHPNQATLVTNTGEQVSSDLWFSDDVGGEFLGKVKKEGNVLFFVKAKPEELTDL HHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEE KVVIDGPFNENFDKVAEDRYEYTIDVTK EEEEECCCCCCHHHHHCCCEEEEEEECC >Mature Secondary Structure MNMKRFGLLVAVPLALLVGCGEADELKTTATDTEEVVEAEASTAEESSTEETGVQESELG CCHHHHHHHHHHHHHHHHCCCCCHHCCCCCCCHHHHHHHHHCCCCCCCCHHCCCCHHHCC TNKIYMKNKALTITETMGPIQFAIDKVQTSRLTVAEAYSDSFDGQEEVTVVAMNMIVENT CCEEEEECCEEEEEECCCHHHHHHHHHHHHHEEEEHHHCCCCCCCCCEEEEEEHHHHHHH VDETMSFHPNQATLVTNTGEQVSSDLWFSDDVGGEFLGKVKKEGNVLFFVKAKPEELTDL HHHHHHCCCCCEEEEECCCHHHHCCCCCCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEE KVVIDGPFNENFDKVAEDRYEYTIDVTK EEEEECCCCCCHHHHHCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA