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The map label for this gene is ykwD [H]

Identifier: 229916636

GI number: 229916636

Start: 861811

End: 863184

Strand: Reverse

Name: ykwD [H]

Synonym: EAT1b_0908

Alternate gene names: 229916636

Gene position: 863184-861811 (Counterclockwise)

Preceding gene: 229916637

Following gene: 229916635

Centisome position: 28.77

GC content: 46.72

Gene sequence:

>1374_bases
ATGAAACGCATGAAACAGGTTTTTTCGATGTTCCTCGTCATGTTCTTAGTACTCTCGATCATTTCTCCAAACGCCGCATC
GGCATCCACGATGAAACCGTCTCTTAAAGCCGTGACTACGCAAGTCACTTCGCCAATTTATCAATCGAAGTCCACCCATT
CGAAAAAAGTGGCTACTGTTAAGAAAGGTGCTAAGGTCTCCATCGTGAGTGAAGCTAAGGGTTGGAGTTATGTCACATAT
GGTTCGAAAAAAGGATACATGGTATCTAAATCCTTCACGCCGAAACAAAATGAAATGGCGACGAAGAAGTCCGTGTCTCT
CTATTCGTCAACTTCTTCGAAATCGCACAAGATCAAGACGCTCTCCCCAGACACCGAGGTGCTCGTGTTAAAAGAGTATC
GTAGTTGGGCTCTCGTTCAATTCGGTGGGACATCAGGTTGGATGGCTAAAAGTCACCTGAAATCTCGTGTCAAGAAACCG
GTGATCAAGGCTGCCACAGTGCAAACAGATGTTTCCATCATCTATGTCTCGCCGTCGACCTCAGCGAAAGAAGTGTCGAC
GCTTAAGTTTGGTGATTCTGTCGTCATTTTGAGTGAAGCGGAGGGATGGTCGCATATCCGGTTTGGTCAAGTAACAGGAT
ATATGATTTCGAAAGACTTCACACCGGAAGAGACGGAATTTGCGACAACGCATTCGTCGATTGTATATTACGACACCTCT
TCCAAGTCTGAGAAAGTGATGACCGTTCCCGCAAACGCGATTGTCACGGTTTTGAAGGTCTATCGTAGCTGGTCTCTCGT
TCAGTACGAATCACAAGTCGGATGGATGGCAACACGTTATCTTGTGTTACAGGATACGGACCCGGAACCCGATCCGGTCG
AGGACGAACCGACACCGCCGACGGTCCCTGAAGAACCGACTGTCCCGGAAGATCCGAATACCCAGTTCAAACAACTCGTC
AAAGCCTCTTACGAGAAGGTCTCTCAATCAAACGACTGGCAAGAACCTTCCGCCGAAATCGTTCGTCTCATCAACGAATA
TCGTATGGAAAACGGTTTAAACCATCTTGCCGACCGACAAAGTCTTGTTGAGTTTGTTGCCTTCCGTTGGGATGATATGA
AAACAAATGATTATGTCGCCCACAATAGTCCGGTCTATGGTTCATTATTTGAGATGACTGAAAAGGCGGGCATCGGCATC
CAGAAATTTGCGGGCGAAAACATCGCTTGGAATCAAATGACACCGGCGCAAGTCGTTCAAGCATGGAAAGATAGTCCAGG
TCATAATGCCAATATGCTGAATCCATACTACACACACTCAGGTCTCATCTGGAAAGATGGTCTTGCCGTTCATGTGTTTG
AAGGCGATCTATAA

Upstream 100 bases:

>100_bases
ATCGTAACGTCTTAGCTTTTAGATGTCATGTGTTTTGGGACTCACACACACTACATATGTAATCTCTAAGATGTCAAAAA
ATTGAAGGAGTTGTTTATTC

Downstream 100 bases:

>100_bases
TCCCAATCACCGTTAATAAAAAATCTCATTTGATTTTACGAAATAAAGTGGGCGTGCCGATATCATTCGGCACGCCATAC
TTATCTAGTCTAAACCCAAG

Product: SCP-like extracellular

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 457; Mature: 457

Protein sequence:

>457_residues
MKRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKSTHSKKVATVKKGAKVSIVSEAKGWSYVTY
GSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHKIKTLSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHLKSRVKKP
VIKAATVQTDVSIIYVSPSTSAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSSIVYYDTS
SKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYLVLQDTDPEPDPVEDEPTPPTVPEEPTVPEDPNTQFKQLV
KASYEKVSQSNDWQEPSAEIVRLINEYRMENGLNHLADRQSLVEFVAFRWDDMKTNDYVAHNSPVYGSLFEMTEKAGIGI
QKFAGENIAWNQMTPAQVVQAWKDSPGHNANMLNPYYTHSGLIWKDGLAVHVFEGDL

Sequences:

>Translated_457_residues
MKRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKSTHSKKVATVKKGAKVSIVSEAKGWSYVTY
GSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHKIKTLSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHLKSRVKKP
VIKAATVQTDVSIIYVSPSTSAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSSIVYYDTS
SKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYLVLQDTDPEPDPVEDEPTPPTVPEEPTVPEDPNTQFKQLV
KASYEKVSQSNDWQEPSAEIVRLINEYRMENGLNHLADRQSLVEFVAFRWDDMKTNDYVAHNSPVYGSLFEMTEKAGIGI
QKFAGENIAWNQMTPAQVVQAWKDSPGHNANMLNPYYTHSGLIWKDGLAVHVFEGDL
>Mature_457_residues
MKRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKSTHSKKVATVKKGAKVSIVSEAKGWSYVTY
GSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHKIKTLSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHLKSRVKKP
VIKAATVQTDVSIIYVSPSTSAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSSIVYYDTS
SKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYLVLQDTDPEPDPVEDEPTPPTVPEEPTVPEDPNTQFKQLV
KASYEKVSQSNDWQEPSAEIVRLINEYRMENGLNHLADRQSLVEFVAFRWDDMKTNDYVAHNSPVYGSLFEMTEKAGIGI
QKFAGENIAWNQMTPAQVVQAWKDSPGHNANMLNPYYTHSGLIWKDGLAVHVFEGDL

Specific function: Unknown

COG id: COG2340

COG function: function code S; Uncharacterized protein with SCP/PR1 domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SCP domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014044
- InterPro:   IPR014258 [H]

Pfam domain/function: PF00188 SCP [H]

EC number: NA

Molecular weight: Translated: 51020; Mature: 51020

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKSTHSKKVATV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
KKGAKVSIVSEAKGWSYVTYGSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHKIKT
HCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHEEEECCCCCCCEEEE
LSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHLKSRVKKPVIKAATVQTDVSIIYVSPST
ECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHEEEEECEEEEEECCCC
SAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSSIVYYDTS
CHHHEEEEEECCEEEEEECCCCCCEEEECCEEEEEEECCCCCCCCCEEECCCEEEEEECC
SKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYLVLQDTDPEPDPVEDEPTPP
CCCCEEEEECHHHHHHHHHHHHCCCEEEEHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC
TVPEEPTVPEDPNTQFKQLVKASYEKVSQSNDWQEPSAEIVRLINEYRMENGLNHLADRQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLVEFVAFRWDDMKTNDYVAHNSPVYGSLFEMTEKAGIGIQKFAGENIAWNQMTPAQVVQ
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHH
AWKDSPGHNANMLNPYYTHSGLIWKDGLAVHVFEGDL
HHHCCCCCCCCCCCCEECCCCEEEECCCEEEEECCCC
>Mature Secondary Structure
MKRMKQVFSMFLVMFLVLSIISPNAASASTMKPSLKAVTTQVTSPIYQSKSTHSKKVATV
CHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHH
KKGAKVSIVSEAKGWSYVTYGSKKGYMVSKSFTPKQNEMATKKSVSLYSSTSSKSHKIKT
HCCCEEEEEECCCCCEEEEECCCCCEEEECCCCCCHHHHHHHHHHEEEECCCCCCCEEEE
LSPDTEVLVLKEYRSWALVQFGGTSGWMAKSHLKSRVKKPVIKAATVQTDVSIIYVSPST
ECCCCCEEEEEECCCEEEEEECCCCCCHHHHHHHHHHHCCHHHHEEEEECEEEEEECCCC
SAKEVSTLKFGDSVVILSEAEGWSHIRFGQVTGYMISKDFTPEETEFATTHSSIVYYDTS
CHHHEEEEEECCEEEEEECCCCCCEEEECCEEEEEEECCCCCCCCCEEECCCEEEEEECC
SKSEKVMTVPANAIVTVLKVYRSWSLVQYESQVGWMATRYLVLQDTDPEPDPVEDEPTPP
CCCCEEEEECHHHHHHHHHHHHCCCEEEEHHHCCEEEEEEEEEECCCCCCCCCCCCCCCC
TVPEEPTVPEDPNTQFKQLVKASYEKVSQSNDWQEPSAEIVRLINEYRMENGLNHLADRQ
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
SLVEFVAFRWDDMKTNDYVAHNSPVYGSLFEMTEKAGIGIQKFAGENIAWNQMTPAQVVQ
HHHHHHHHHCCCCCCCCEEECCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCHHHHHH
AWKDSPGHNANMLNPYYTHSGLIWKDGLAVHVFEGDL
HHHCCCCCCCCCCCCEECCCCEEEECCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]