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The map label for this gene is yvcD [H]

Identifier: 229916605

GI number: 229916605

Start: 828701

End: 830173

Strand: Reverse

Name: yvcD [H]

Synonym: EAT1b_0877

Alternate gene names: 229916605

Gene position: 830173-828701 (Counterclockwise)

Preceding gene: 229916606

Following gene: 229916604

Centisome position: 27.67

GC content: 52.21

Gene sequence:

>1473_bases
ATGGAAGCGAACTATGAAGCAGTAATGACGCTACCCGAACCAGAATCTCCGCTCGCTGCGGAGCTCCACTACTATAGAGG
TCGTCGTGCGTTACGTGAAGGTCGCCTGGATGAAGCGACTTTTTTCATGGCTGAAGCGACAGCGGCAGCCACGCATCGCG
TCGACTATCATAAACAGTACGCAGAACTGTTATTTGAAGTAGGGGAGGTCTACCACGCCAATGACGTGTGGAAACGAGTA
TTAGAGCTCGACGAGACCGCAACAGAGGCACTGTATCACTTAGCAAGCAACTGTGCCTATGTCTCTCAATATGAAGAAGC
GGCGAACTATGCATCCGAATATCTCGCCCGTGACACGAAAGGTCACTACACGGAAGCCGTGCAATCCCTTCTTGAACTGA
TCGAACTCGAACAAGAGCTCGAGGACGAGGAAGAAGACGAATTGATCACATGGCATACGGAAGCGCAGCGTCAAATCGAC
AAAGGACGATTGTTTGCGGCAAAGGCGACACTCGAGCGTCTCATCGGTCAATATCCATCGTTTTGGCCGGCATACAACAA
TCTATCGGTCGTCAGTTTTTACCTCGGCGATGACCAAGCCGCCTTCCGGACGCTCGAATACGTGCTCGACCAAAATCCGG
GCAACTTGCATGCGATCTTGAACACGATTCTCTTGCTCCATGAAGCGGGTCAATCGGAAGCGGCGATGCAGTTGTCGACA
CCGCTCACGCGTGTCCGTCCACTCCAATTTGACTTGCGTTATAAATTGGCGACGACACTCGCGCTCGTCGGACATTACGA
CCGTGCGTATGAAGAACTGCGTCTATTGAAAGACCGCGGATTCCGTGGGGACCCATTGTTCGGGCATTGGCTCAGCGTGT
CTGCCTACAAGACAGGACGACTTGAAGAGGCAGCCACCTACTTGAACAATGAAGAGATGAAACAGTTTGACGAGAAACAG
AGCTTCGACATCCGAGAAAATCTCGAGTTTCGTTCGGCACTCGTCCAAGGATTGCGTCAAGAGAGCGATTTGGCTCGAAT
CGAGATCATCCGAATCATCGCCAACTTAAAAGATGACGAAGCGTTCGAAGCGCTCGCGCTCACGAATGCCGTGACGGAAA
ATGAGACGGTCCGGGCATTCGCGGAGATGTGTCGTGCCGACCTTTGTCAGCAACCGTTCAACGGAGACGTCCGGATCAAG
CGTGCGTTTGATGCGCTCGTCTTGGCTGAAGCACATGTATCCGAAGCGGAACGGATGAGCCTAGAGGGCGACTTCTATGA
GCGTTTTGCGATGCTTCTCTTGTCTGATGAATCATTCATGGACGTAACGGCATCGGCCGCTGCGCTCGTCTGGATGTTTT
ATACGAAACGGGACGCATTGATTCTCGAAGATTGTGCGAACGCCTTCCATCTCTCGGTCGACACATTGACTGACACGGTC
CGTTCGTTCAAACGGACACTCGAACAAGCATAA

Upstream 100 bases:

>100_bases
GATTTTTTTTAACTTTTTCAGTTGCCCTCGTTGTTCGAGTGCGGTATTCTTATCCCTGCAACTAAAAAAAGATTTAGAGA
TGATGTGGAGGATTTAGAAT

Downstream 100 bases:

>100_bases
AGATAGACGATACCCTTATAGGTTTCTTATACTAAAGGCAATCAATTTCTTGCAGAGGTGGAATCAACATGACAGAAGAA
AAAATTTATGACGTCATTAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MEANYEAVMTLPEPESPLAAELHYYRGRRALREGRLDEATFFMAEATAAATHRVDYHKQYAELLFEVGEVYHANDVWKRV
LELDETATEALYHLASNCAYVSQYEEAANYASEYLARDTKGHYTEAVQSLLELIELEQELEDEEEDELITWHTEAQRQID
KGRLFAAKATLERLIGQYPSFWPAYNNLSVVSFYLGDDQAAFRTLEYVLDQNPGNLHAILNTILLLHEAGQSEAAMQLST
PLTRVRPLQFDLRYKLATTLALVGHYDRAYEELRLLKDRGFRGDPLFGHWLSVSAYKTGRLEEAATYLNNEEMKQFDEKQ
SFDIRENLEFRSALVQGLRQESDLARIEIIRIIANLKDDEAFEALALTNAVTENETVRAFAEMCRADLCQQPFNGDVRIK
RAFDALVLAEAHVSEAERMSLEGDFYERFAMLLLSDESFMDVTASAAALVWMFYTKRDALILEDCANAFHLSVDTLTDTV
RSFKRTLEQA

Sequences:

>Translated_490_residues
MEANYEAVMTLPEPESPLAAELHYYRGRRALREGRLDEATFFMAEATAAATHRVDYHKQYAELLFEVGEVYHANDVWKRV
LELDETATEALYHLASNCAYVSQYEEAANYASEYLARDTKGHYTEAVQSLLELIELEQELEDEEEDELITWHTEAQRQID
KGRLFAAKATLERLIGQYPSFWPAYNNLSVVSFYLGDDQAAFRTLEYVLDQNPGNLHAILNTILLLHEAGQSEAAMQLST
PLTRVRPLQFDLRYKLATTLALVGHYDRAYEELRLLKDRGFRGDPLFGHWLSVSAYKTGRLEEAATYLNNEEMKQFDEKQ
SFDIRENLEFRSALVQGLRQESDLARIEIIRIIANLKDDEAFEALALTNAVTENETVRAFAEMCRADLCQQPFNGDVRIK
RAFDALVLAEAHVSEAERMSLEGDFYERFAMLLLSDESFMDVTASAAALVWMFYTKRDALILEDCANAFHLSVDTLTDTV
RSFKRTLEQA
>Mature_490_residues
MEANYEAVMTLPEPESPLAAELHYYRGRRALREGRLDEATFFMAEATAAATHRVDYHKQYAELLFEVGEVYHANDVWKRV
LELDETATEALYHLASNCAYVSQYEEAANYASEYLARDTKGHYTEAVQSLLELIELEQELEDEEEDELITWHTEAQRQID
KGRLFAAKATLERLIGQYPSFWPAYNNLSVVSFYLGDDQAAFRTLEYVLDQNPGNLHAILNTILLLHEAGQSEAAMQLST
PLTRVRPLQFDLRYKLATTLALVGHYDRAYEELRLLKDRGFRGDPLFGHWLSVSAYKTGRLEEAATYLNNEEMKQFDEKQ
SFDIRENLEFRSALVQGLRQESDLARIEIIRIIANLKDDEAFEALALTNAVTENETVRAFAEMCRADLCQQPFNGDVRIK
RAFDALVLAEAHVSEAERMSLEGDFYERFAMLLLSDESFMDVTASAAALVWMFYTKRDALILEDCANAFHLSVDTLTDTV
RSFKRTLEQA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 3 TPR repeats [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013026
- InterPro:   IPR011990
- InterPro:   IPR019734 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56128; Mature: 56128

Theoretical pI: Translated: 4.42; Mature: 4.42

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEANYEAVMTLPEPESPLAAELHYYRGRRALREGRLDEATFFMAEATAAATHRVDYHKQY
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AELLFEVGEVYHANDVWKRVLELDETATEALYHLASNCAYVSQYEEAANYASEYLARDTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GHYTEAVQSLLELIELEQELEDEEEDELITWHTEAQRQIDKGRLFAAKATLERLIGQYPS
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHCCCC
FWPAYNNLSVVSFYLGDDQAAFRTLEYVLDQNPGNLHAILNTILLLHEAGQSEAAMQLST
CCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
PLTRVRPLQFDLRYKLATTLALVGHYDRAYEELRLLKDRGFRGDPLFGHWLSVSAYKTGR
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEHHCCCC
LEEAATYLNNEEMKQFDEKQSFDIRENLEFRSALVQGLRQESDLARIEIIRIIANLKDDE
HHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AFEALALTNAVTENETVRAFAEMCRADLCQQPFNGDVRIKRAFDALVLAEAHVSEAERMS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHC
LEGDFYERFAMLLLSDESFMDVTASAAALVWMFYTKRDALILEDCANAFHLSVDTLTDTV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHHHHHHH
RSFKRTLEQA
HHHHHHHHCC
>Mature Secondary Structure
MEANYEAVMTLPEPESPLAAELHYYRGRRALREGRLDEATFFMAEATAAATHRVDYHKQY
CCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
AELLFEVGEVYHANDVWKRVLELDETATEALYHLASNCAYVSQYEEAANYASEYLARDTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCC
GHYTEAVQSLLELIELEQELEDEEEDELITWHTEAQRQIDKGRLFAAKATLERLIGQYPS
CHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECHHHHHHHHCHHHHHHHHHHHHHHCCCC
FWPAYNNLSVVSFYLGDDQAAFRTLEYVLDQNPGNLHAILNTILLLHEAGQSEAAMQLST
CCCCCCCCEEEEEEECCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCC
PLTRVRPLQFDLRYKLATTLALVGHYDRAYEELRLLKDRGFRGDPLFGHWLSVSAYKTGR
CHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHEEEEHHCCCC
LEEAATYLNNEEMKQFDEKQSFDIRENLEFRSALVQGLRQESDLARIEIIRIIANLKDDE
HHHHHHHHCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCH
AFEALALTNAVTENETVRAFAEMCRADLCQQPFNGDVRIKRAFDALVLAEAHVSEAERMS
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHC
LEGDFYERFAMLLLSDESFMDVTASAAALVWMFYTKRDALILEDCANAFHLSVDTLTDTV
CCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCHHEEHHHHHHHHH
RSFKRTLEQA
HHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]