Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is yxkD [H]

Identifier: 229916583

GI number: 229916583

Start: 807341

End: 808228

Strand: Reverse

Name: yxkD [H]

Synonym: EAT1b_0855

Alternate gene names: 229916583

Gene position: 808228-807341 (Counterclockwise)

Preceding gene: 229916584

Following gene: 229916582

Centisome position: 26.94

GC content: 55.52

Gene sequence:

>888_bases
ATGAAACGTCAACAACAACATCTATTGCGCCAACAGGTATGGCGCAAGCTACAAACCATCTCGGTGAAGGACATCGCCTG
GATCATCGCGGGCTCATTCATTCTCTCGTTCGGGGTCAACTACTTCACCGTACCGAACGACTTCTCGGAAGGTGGCCTGC
TCGGGGTCACGATCATCCTGTACTACGTGTTCGGCTGGGACCTCGGGCTCACGTCGATCATCGGGAACGGGATTCTCTTT
ATCGTCGGCTATAAGCTGCTCGACCGTCGGACAATGGTCTATTCGGTCATCGCCGTCATCGCGACATCATTCTTCCTCAG
TCTGACACATGACTGGGGCAGCCCTGCCGAGGACAAACTGCTTGCGGCCGTCTATGCCGGGATCATGATCGGGGTCGGAA
TCGGCATGGTGCTCCGTGTCGGCGGGACGACCGGCGGGGGCGTCATCATCGCCCGTCTCATGGAACGCTATCTCCACTTG
AGTGTCGCCGTCTCGATGTTCATCATCGATGCGATCGTCGTCGCGACATCTGGCTTCTTCTTAGGGGAACAAGTCGTTCT
CTATACGCTCATCGCGATCATCATCGGTTCATGGGTCATCGATCTCGTCGCGGAAGGTCTCAACATCCGCAAGGCCGTCA
CGATCATCAGCGACAAGCAAGAAGAGCTCGCCGTCGTCTTGACGGAGACGCTCGGACGCTCGGCGACGATCATCCATGGA
CACGGTTACTACACGAAGCAGGATAAGAACATGTTGTATATGATCGTCGACAAACGTCAGATCGCACCACTCAAAAAAAT
CGTCCAAGTGACGGACGACCGTGCCTTCGTCGTCATCCACCAGGTGAAGGAAGTCATCGGGGAAGGATTCAGCTACCCGT
CCCGATAA

Upstream 100 bases:

>100_bases
AGCGCAAGTTGCCGATTATGAAAGACGGTGCGCCAAAGCCAGTACAATCTTAAGACTGCGGCTTTTGCCGCGGTCTTTTT
TCTATGGAGGGAGGACATTT

Downstream 100 bases:

>100_bases
TTTGAATGCTGGTGTTTTATTGATAACTTCTATATAATAAAAGGCGTGTAAATAGAAGGAGGAACTGACTACTATGCAAA
CGATCGCTACAATCAGCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 295; Mature: 295

Protein sequence:

>295_residues
MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF
IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL
SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG
HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR

Sequences:

>Translated_295_residues
MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF
IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL
SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG
HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR
>Mature_295_residues
MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIILYYVFGWDLGLTSIIGNGILF
IVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKLLAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHL
SVAVSMFIIDAIVVATSGFFLGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG
HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR

Specific function: Unknown

COG id: COG1284

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0750 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740
- InterPro:   IPR019264 [H]

Pfam domain/function: PF02588 DUF161; PF10035 DUF2179 [H]

EC number: NA

Molecular weight: Translated: 32618; Mature: 32618

Theoretical pI: Translated: 9.33; Mature: 9.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIIL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
YYVFGWDLGLTSIIGNGILFIVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKL
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHLSVAVSMFIIDAIVVATSGFF
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEC
HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR
CCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MKRQQQHLLRQQVWRKLQTISVKDIAWIIAGSFILSFGVNYFTVPNDFSEGGLLGVTIIL
CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHH
YYVFGWDLGLTSIIGNGILFIVGYKLLDRRTMVYSVIAVIATSFFLSLTHDWGSPAEDKL
HHHHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH
LAAVYAGIMIGVGIGMVLRVGGTTGGGVIIARLMERYLHLSVAVSMFIIDAIVVATSGFF
HHHHHHHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
LGEQVVLYTLIAIIIGSWVIDLVAEGLNIRKAVTIISDKQEELAVVLTETLGRSATIIHG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHEEEECCCHHHHHHHHHHHCCCCEEEEEC
HGYYTKQDKNMLYMIVDKRQIAPLKKIVQVTDDRAFVVIHQVKEVIGEGFSYPSR
CCEEEECCCCEEEEEECCHHHHHHHHHHHHCCCCCEEHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969509; 9384377 [H]