| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ytvI [H]
Identifier: 229916491
GI number: 229916491
Start: 715695
End: 716828
Strand: Direct
Name: ytvI [H]
Synonym: EAT1b_0761
Alternate gene names: 229916491
Gene position: 715695-716828 (Clockwise)
Preceding gene: 229916488
Following gene: 229916494
Centisome position: 23.86
GC content: 49.03
Gene sequence:
>1134_bases ATGTCATCGGCAAGACTTTGGCAATTGCTTCGATTTGTCCTCGTCGTCATCGGTTTCTTTTTAATCACGTGGCTATTGAA CATACTTTTTGAATATACATATCCGTTCGTATTTGCCCTGCTCTTATCCTTGATGACCGTTCCGCTCGTCAACTTTTTCG AGCGAAAAACAAATATGCCTCGTGCACTCGGCACTCTCATTTCCTTAATCATCGTGCTCAGCATCGTCGTCGGAATCATC ACCATCGTCATCATCCAATTGATTCATTATGCGACGGTGGCAGCGGAACGACTCCCTGAACAAATTGAAACACTCACCGA GTTTATCCAACGACTGTTCAATGAGAAAATTGCACCGCTCGTCAACGATGCATATGAGAGCTATCAGCAGTTAAATCCCG GACAGACGACATCGCTCGAGGGAGGAATCACCGAACTCGGTGTCCAACTCGCTGCAGCCATCGGCGTCCTGTCCCGTGGT GTGGCCAGTGTGCTACAAAACATGTTAGCGGCGCTCCCCCTCGTCTTGTTGCTCGTAGTCGTCATTGTGCTCGCTTGGTT CTTCATCACAAAGGATTGGCCAGTATACGTCAACTCATTGAATCGTCTGAACAAGCGTAAAGGATTCAAAGAATTCGAGG AAGTGATGATCAACCTCAAGTCTGCCCTATTTGGATACGTCCGTGCCCAGTTCACGCTCATCTCCATCACATTCGGGATC GTCTTGATCGGCATGCTCATCCTCCGTGTTGACAATCCACTCTCGTTCGCTTTACTCGCGGGGTTCTTTGACCTCTTGCC TTATTTAGGGGTCGGTACGTTACTCATTCCCTGGGCCGCCTATGCCGCGGTGACAGGTGATTGGTTCGTGGCCATCGGAT TGGTCGTGTTGTATATCATCGTCATCGTCCAACGCAATTTAGCTGAACCGAAGATTGTCGGTTCCCATATCGGGCTGAAC CCACTTATCGCACTCATCTCCATCTTCGTTGGACTGAAGCTATTCGGTGTCCTCGGCTTTATCGTCGGACCCGTCCTCGC CGTTCTATTAAAAGCCGTATACAATGCCAAAGTGTTTCATTACATATGGCGATTTATCGTCGGTCCGCCTACGACGACAG CAAAAGAGCGATGA
Upstream 100 bases:
>100_bases TTGAACTTCTCTCACGCTCATTCACCTATCTTTCTGCTTTATTTACCGCTTACATGATATACTATGCTCAACCTAGTTGT CTGGAAAGGGTGGGTTCCAC
Downstream 100 bases:
>100_bases AATGTTGATTTCATCGCTCTTTTTTCATTTGAGGTACAGCCACTACCGGTTGATCGGATTCTGCCGGCTGGAGCGAGAGA CCACTGGTCCCCGCTTCATA
Product: sporulation integral membrane protein YtvI
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 377; Mature: 376
Protein sequence:
>377_residues MSSARLWQLLRFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMPRALGTLISLIIVLSIVVGII TIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPLVNDAYESYQQLNPGQTTSLEGGITELGVQLAAAIGVLSRG VASVLQNMLAALPLVLLLVVVIVLAWFFITKDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGI VLIGMLILRVDNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYIIVIVQRNLAEPKIVGSHIGLN PLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFHYIWRFIVGPPTTTAKER
Sequences:
>Translated_377_residues MSSARLWQLLRFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMPRALGTLISLIIVLSIVVGII TIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPLVNDAYESYQQLNPGQTTSLEGGITELGVQLAAAIGVLSRG VASVLQNMLAALPLVLLLVVVIVLAWFFITKDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGI VLIGMLILRVDNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYIIVIVQRNLAEPKIVGSHIGLN PLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFHYIWRFIVGPPTTTAKER >Mature_376_residues SSARLWQLLRFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMPRALGTLISLIIVLSIVVGIIT IVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPLVNDAYESYQQLNPGQTTSLEGGITELGVQLAAAIGVLSRGV ASVLQNMLAALPLVLLLVVVIVLAWFFITKDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGIV LIGMLILRVDNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYIIVIVQRNLAEPKIVGSHIGLNP LIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFHYIWRFIVGPPTTTAKER
Specific function: Unknown
COG id: COG0628
COG function: function code R; Predicted permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0118 (perM) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014227 - InterPro: IPR002549 [H]
Pfam domain/function: PF01594 UPF0118 [H]
EC number: NA
Molecular weight: Translated: 41909; Mature: 41778
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSARLWQLLRFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RALGTLISLIIVLSIVVGIITIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNDAYESYQQLNPGQTTSLEGGITELGVQLAAAIGVLSRGVASVLQNMLAALPLVLLLVV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVLAWFFITKDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGI HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIGMLILRVDNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYII HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVQRNLAEPKIVGSHIGLNPLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFH HHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIWRFIVGPPTTTAKER HHHHHHHCCCCCCCCCC >Mature Secondary Structure SSARLWQLLRFVLVVIGFFLITWLLNILFEYTYPFVFALLLSLMTVPLVNFFERKTNMP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH RALGTLISLIIVLSIVVGIITIVIIQLIHYATVAAERLPEQIETLTEFIQRLFNEKIAPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VNDAYESYQQLNPGQTTSLEGGITELGVQLAAAIGVLSRGVASVLQNMLAALPLVLLLVV HHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVLAWFFITKDWPVYVNSLNRLNKRKGFKEFEEVMINLKSALFGYVRAQFTLISITFGI HHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VLIGMLILRVDNPLSFALLAGFFDLLPYLGVGTLLIPWAAYAAVTGDWFVAIGLVVLYII HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VIVQRNLAEPKIVGSHIGLNPLIALISIFVGLKLFGVLGFIVGPVLAVLLKAVYNAKVFH HHHHHCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YIWRFIVGPPTTTAKER HHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]