| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ytoP [H]
Identifier: 229916442
GI number: 229916442
Start: 666242
End: 667315
Strand: Reverse
Name: ytoP [H]
Synonym: EAT1b_0712
Alternate gene names: 229916442
Gene position: 667315-666242 (Counterclockwise)
Preceding gene: 229916447
Following gene: 229916441
Centisome position: 22.24
GC content: 50.09
Gene sequence:
>1074_bases ATGGATCAGAAGACGAGAGATTTATTTAAGACGCTAACAGAACTCCCAGGAGCTCCTGGGTTCGAGTCTGAAGTTCGTCA ATTTGTACGTGGACGAATTGAACCCCATTCAGATGAAATTGTCACGGATGGCATCGGATCAATTTTTGGAAAACGTGTCG GAGACGAGTCGGGACCGAAAGTCATGGTAGCCGGACATATGGATGAGGTCGCTTTTATGGTGACACGGATCACCGAGAAC GGCATGCTTTACATACAACCACTCGGTGGCTGGTGGAACCAAGTGCTCATGGCGCAACGCTTCGACATCATCACGTCGAA CGGTAAAATTCCGGGTGTCGTCGCTTCGACACCGCCTCATTTGTTAGGTCCAGATGCAATGAGTAAACCGATGGACATCA AGCAGATGTTTATCGATATCGGAGCAGATTCGAAAGAAGAAGCAGAGTCATGGGGTGTACGTCCGGGGGTCCCTGCTGTT CCATCGAGCGCATTTACCCCACTTCATCACCCGAAAAAGATTATGGCCAAAGCTTGGGACAATCGTTATGGCGTCGGTCT TGCAATCGAATTGTTGGAGGAAACGACAAAAGCGGATCATCCAAACATCTTGTTCTCGGGTGCTACCGTGCAAGAAGAAG TCGGATTACGTGGAGCGCAGACAGCATCTGAATTGATTCAGCCAGATGTGGCACTCGTACTCGATGCTTCACCGGCTAAT GATGCTTCAGGAAGTAAAACGGAGTTCGGTCAGCTCGGTGAGGGAGCATTGATCCGAATTTTAGATCGCGTCATGGTCAT GTCTCCTGAAATGCGTGATTTCTTACTCGATACGGCTTCAGACGAAAACATCAAGACACAATATTTCGTCTCGCCAGGCG GCACCGATGCGGGGCGCGTTCACATGAGCGGAGAAGGGGTGCCGACAGCCGTCATTGGCGTCGCATCTCGTTATATCCAT ACACATGCCTCGATTCTTCATACGGATGACTACGATGCAGCGAAAGCGTTGCTCAAAGCGTTGGTCAAGCGGCTTGATCG TTCGACACTTGAAACGCTACGTCCGTCTCTGTAA
Upstream 100 bases:
>100_bases CGTACCAAAACCTGTACCCGAATGGAATGAAAAGCATTCGCATCCTGTCAAAACTTTTGTATATAATGAGACAAGAACGG TTAGGAAAGGATGATGAAAG
Downstream 100 bases:
>100_bases ATCAAACATTCCGTTCACTCGAAAGATGAGTGGACGGTTTTTTAATGGATGTTCTTGCTATTTCATGAAAACGTCTTATA CTGATAAAGGTGTTTATACA
Product: Glutamyl aminopeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 357; Mature: 357
Protein sequence:
>357_residues MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL
Sequences:
>Translated_357_residues MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL >Mature_357_residues MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPKVMVAGHMDEVAFMVTRITEN GMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPHLLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAV PSSAFTPLHHPKKIMAKAWDNRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRVHMSGEGVPTAVIGVASRYIH THASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL
Specific function: Unknown
COG id: COG1363
COG function: function code G; Cellulase M and related proteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase M42 family [H]
Homologues:
Organism=Escherichia coli, GI1790332, Length=344, Percent_Identity=38.3720930232558, Blast_Score=222, Evalue=2e-59, Organism=Escherichia coli, GI1788727, Length=349, Percent_Identity=35.8166189111748, Blast_Score=192, Evalue=2e-50, Organism=Escherichia coli, GI87082417, Length=359, Percent_Identity=25.3481894150418, Blast_Score=113, Evalue=2e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008007 [H]
Pfam domain/function: PF05343 Peptidase_M42 [H]
EC number: NA
Molecular weight: Translated: 38697; Mature: 38697
Theoretical pI: Translated: 5.13; Mature: 5.13
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPK CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE VMVAGHMDEVAFMVTRITENGMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPH EEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCCCCEEECCCCCC LLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAVPSSAFTPLHHPKKIMAKAWD CCCCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC NRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN CCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRV CCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEE HMSGEGVPTAVIGVASRYIHTHASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL EECCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDQKTRDLFKTLTELPGAPGFESEVRQFVRGRIEPHSDEIVTDGIGSIFGKRVGDESGPK CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCE VMVAGHMDEVAFMVTRITENGMLYIQPLGGWWNQVLMAQRFDIITSNGKIPGVVASTPPH EEEECCHHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHEEECCCCCCEEECCCCCC LLGPDAMSKPMDIKQMFIDIGADSKEEAESWGVRPGVPAVPSSAFTPLHHPKKIMAKAWD CCCCHHHCCCHHHHHHHHHCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHCC NRYGVGLAIELLEETTKADHPNILFSGATVQEEVGLRGAQTASELIQPDVALVLDASPAN CCCCCHHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCHHHHHHHHCCCEEEEEECCCCC DASGSKTEFGQLGEGALIRILDRVMVMSPEMRDFLLDTASDENIKTQYFVSPGGTDAGRV CCCCCCCHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEE HMSGEGVPTAVIGVASRYIHTHASILHTDDYDAAKALLKALVKRLDRSTLETLRPSL EECCCCCCHHHHHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]