Click here to switch to the map view.

The map label for this gene is ywaC [H]

Identifier: 229916422

GI number: 229916422

Start: 646092

End: 646718

Strand: Reverse

Name: ywaC [H]

Synonym: EAT1b_0692

Alternate gene names: 229916422

Gene position: 646718-646092 (Counterclockwise)

Preceding gene: 229916423

Following gene: 229916419

Centisome position: 21.56

GC content: 45.14

Gene sequence:

>627_bases
ATGGAGATAGAAGAATTTTTCGGCGACCAGTTTCATCAATGGCGCGAACACTTTCGTTATTATGAAATGGCGATCACGGA
ACTCGAGAGCGATCTCGGGATCATTGACTTGGATTGGCAGACGAGACTCGGGTATTCACCGATTGAACATGTGAAGACGA
GAATGAAGACATTGCCGTCTATCGTGCGTAAGATGAAACGGAAAGACTTACCTTTAGAGGTTTCGGCACTTTGGGAGCAT
GTGCACGATGTGGCGGGCATTCGGATTGTCACGAGCTTCCGTGATGACATATATGAGATTTTGCGTCATTTGGAGGCGCG
AGATGATTTAGATATCATCGAAATAAAAGATTACATTAAATACCCAAAACCGAGCGGATATCGGAGCTTACATCTCATCG
TGAAAACAAAAGTCTATTTGGCCGAACGAATCATCTGGGTGCCGGCCGAGATTCAGATTCGTACACTTGCTATGGATTTT
TGGGCGGCGACGGAACATAAGCTTCAATATAAATATCAGCATGACGTACCCGAGTCATCTAAGGAAGAATTAATAGAGGC
GGCACTCATGGCGGATGCCCTCGATACGCAAATGGGGCGTATCCGACAAGAGATTTTGAAGAAATAA

Upstream 100 bases:

>100_bases
ATGAACATCCTGTCCGTTCCTCATTTGTTGAGGAATGGACTTTTTTTATACATGACGTGCGGTTCGGATTTGCTAAAATG
GGGAGAAAGGAGGGATGACG

Downstream 100 bases:

>100_bases
AAAAATCCCCTTCGCGAAGAAGGGGATTAAAAGCATTAACGTGAGTAGTACTCGACGATGAGTTGCTCTTTGATTTGGTC
GTTAAGTTCAGCGCGTTCTG

Product: RelA/SpoT domain protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MEIEEFFGDQFHQWREHFRYYEMAITELESDLGIIDLDWQTRLGYSPIEHVKTRMKTLPSIVRKMKRKDLPLEVSALWEH
VHDVAGIRIVTSFRDDIYEILRHLEARDDLDIIEIKDYIKYPKPSGYRSLHLIVKTKVYLAERIIWVPAEIQIRTLAMDF
WAATEHKLQYKYQHDVPESSKEELIEAALMADALDTQMGRIRQEILKK

Sequences:

>Translated_208_residues
MEIEEFFGDQFHQWREHFRYYEMAITELESDLGIIDLDWQTRLGYSPIEHVKTRMKTLPSIVRKMKRKDLPLEVSALWEH
VHDVAGIRIVTSFRDDIYEILRHLEARDDLDIIEIKDYIKYPKPSGYRSLHLIVKTKVYLAERIIWVPAEIQIRTLAMDF
WAATEHKLQYKYQHDVPESSKEELIEAALMADALDTQMGRIRQEILKK
>Mature_208_residues
MEIEEFFGDQFHQWREHFRYYEMAITELESDLGIIDLDWQTRLGYSPIEHVKTRMKTLPSIVRKMKRKDLPLEVSALWEH
VHDVAGIRIVTSFRDDIYEILRHLEARDDLDIIEIKDYIKYPKPSGYRSLHLIVKTKVYLAERIIWVPAEIQIRTLAMDF
WAATEHKLQYKYQHDVPESSKEELIEAALMADALDTQMGRIRQEILKK

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 24844; Mature: 24844

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEIEEFFGDQFHQWREHFRYYEMAITELESDLGIIDLDWQTRLGYSPIEHVKTRMKTLPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHH
IVRKMKRKDLPLEVSALWEHVHDVAGIRIVTSFRDDIYEILRHLEARDDLDIIEIKDYIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHC
YPKPSGYRSLHLIVKTKVYLAERIIWVPAEIQIRTLAMDFWAATEHKLQYKYQHDVPESS
CCCCCCCCEEEHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCH
KEELIEAALMADALDTQMGRIRQEILKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MEIEEFFGDQFHQWREHFRYYEMAITELESDLGIIDLDWQTRLGYSPIEHVKTRMKTLPS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHCCCCCHHHHHHHHHHHHHH
IVRKMKRKDLPLEVSALWEHVHDVAGIRIVTSFRDDIYEILRHLEARDDLDIIEIKDYIK
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHHHHC
YPKPSGYRSLHLIVKTKVYLAERIIWVPAEIQIRTLAMDFWAATEHKLQYKYQHDVPESS
CCCCCCCCEEEHHHHHHHHHHHHHEECCCCEEEHHHHHHHHHHHHHHHHEEECCCCCCCH
KEELIEAALMADALDTQMGRIRQEILKK
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]