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The map label for this gene is ytcJ [H]

Identifier: 229916418

GI number: 229916418

Start: 641138

End: 642709

Strand: Reverse

Name: ytcJ [H]

Synonym: EAT1b_0688

Alternate gene names: 229916418

Gene position: 642709-641138 (Counterclockwise)

Preceding gene: 229916419

Following gene: 229916416

Centisome position: 21.42

GC content: 49.94

Gene sequence:

>1572_bases
ATGGGTACACTATGGGTCAACGGGAATATCTATACATTGAATAAACCGGGTGAGATGGAACGTGCCATGTTTATTGAGCA
TGGACGCGTCTTGAAGATGGGGGACGAGGGACATCTCCGACGTACATATGCCGGTCGCATCGAAGAGATTGTGAATTTGG
AAGGGAAGAGTGTGTATCCGGCCTTTACAGATTCACACATTCACCTCGTCGGATACGGCGAAGCGCTCGATCGTGTCGAT
GCGAGTGAGGCGACGGATCTTCGAGAATTACTTGAAACGATGAAGCAACGAGGGTCGGATGACGATTGGATCGTCGCAGA
AGGATTTGATGACCGTCTGCTTGGTGACATGCCGACACGCGAGATGATTGATGCAGTGATTGACGACCGTCCTGTCGTGT
TGAAGCGTGTTTGTCGTCATGTGGCCGTCGTGAACTCGAAAGGACTTGAACGACTTGGACTGATCCATCATACGGTGATC
GAAGGTGGAAAACTTGGGCGAGATGAAGAGGGGAAATTGAATGGCGTCCTATATGATGCCGCGCTAGACCTCTTGTATAA
AGAATTGAGTGGGAACCGTAAGAAAAATGCCGCTTCCCTTCGCCGGGCGATCGATTCATTATTCGCACATGGAATCATCG
GCGCCCATACGGAGGACTTGTTTTATCATGGAGATCCGCTCGAGACGATTCAAGCGTATGAAGATGTACTGGACGAGCTT
CCGTTTCAAGCACACCTCCTCGTTCACGAACAGGTGGTGGACCGTGTCATTCAGCAAGATGCGATGACGCGACGGAAGCG
GTTTGACTTCGGTGCGATGAAACTCTTTGTCGACGGTTCGTTCGGTGGTCGCACGGCTCTGTTATCTGCACCTTATGCGG
ATGATCGGAGCCAGCGAGGGATTGAAGTACATCGACCAGATCATCTTGAAGCGCTCGTGAAAAAAGCGCGAACATACGGG
ATGAATGTGGCGGCGCATGTGATTGGAGACGCGGCGGTCGAGCAATTTGTCGGTTTGCTTGAGAAGTACCCTGCCAAAAA
AGGGACACGAGATCGAATTATCCATGCTTCCTTATTGAATGATACATTGATCAATCGGATCAAATCATTACCCGTTTTGA
TTGATGCACAGCCGGTATTTTTATCGGATGACATGGACATGCTGTTTGAGCGGTTAGGCAATGAACGTGTGCATGACGTC
TATCGATTCAAGTCTTTACTCGATACGGGGGCGTTGGTGTTAGGTGGGAGTGACGCGCCAATCTCATCTGTTGACGTCCG
AAAAGGATTGTTTGGAGCGGTGATGCGACAATCGTTTCACGGGTCGAGCACGCTAAACCCGAGTGAGCGTCTATCGATGT
ATGAAGCGCTTCGCAGCTTCACGTATTCGCCTCATGTTGCTACAGGGACGCACGGAAGAAACGGGCTATTGGTTCAAAGT
TACAATGCCAACTTCACAGTATGGGACGAAGATTTCTTTAAATTGAGTGGGGAAGACATCCTACACAACCGTCTTGTCAT
GACTGTCGTCGAAGGGAAGCCCGTGTACGAGGCAGAAAAAGCCACGATGTAA

Upstream 100 bases:

>100_bases
AACAGCAGGAATTGCTAAAAAAATAAACGATGCATGAAGATTGACGGAAACGGGAAAAACGTAGACGTCAATCTTTTTTC
AATCAAGGAGGAATCGTCAG

Downstream 100 bases:

>100_bases
AAAGAGGAGTGGTTTCACCCGAAAGGGATGAAGCCACTCCTTTTCTTCATCAGAAGAATGAACGTTGCACTTTATGCCAG
AACGAGTTGGTCCGAAGTTT

Product: amidohydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 523; Mature: 522

Protein sequence:

>523_residues
MGTLWVNGNIYTLNKPGEMERAMFIEHGRVLKMGDEGHLRRTYAGRIEEIVNLEGKSVYPAFTDSHIHLVGYGEALDRVD
ASEATDLRELLETMKQRGSDDDWIVAEGFDDRLLGDMPTREMIDAVIDDRPVVLKRVCRHVAVVNSKGLERLGLIHHTVI
EGGKLGRDEEGKLNGVLYDAALDLLYKELSGNRKKNAASLRRAIDSLFAHGIIGAHTEDLFYHGDPLETIQAYEDVLDEL
PFQAHLLVHEQVVDRVIQQDAMTRRKRFDFGAMKLFVDGSFGGRTALLSAPYADDRSQRGIEVHRPDHLEALVKKARTYG
MNVAAHVIGDAAVEQFVGLLEKYPAKKGTRDRIIHASLLNDTLINRIKSLPVLIDAQPVFLSDDMDMLFERLGNERVHDV
YRFKSLLDTGALVLGGSDAPISSVDVRKGLFGAVMRQSFHGSSTLNPSERLSMYEALRSFTYSPHVATGTHGRNGLLVQS
YNANFTVWDEDFFKLSGEDILHNRLVMTVVEGKPVYEAEKATM

Sequences:

>Translated_523_residues
MGTLWVNGNIYTLNKPGEMERAMFIEHGRVLKMGDEGHLRRTYAGRIEEIVNLEGKSVYPAFTDSHIHLVGYGEALDRVD
ASEATDLRELLETMKQRGSDDDWIVAEGFDDRLLGDMPTREMIDAVIDDRPVVLKRVCRHVAVVNSKGLERLGLIHHTVI
EGGKLGRDEEGKLNGVLYDAALDLLYKELSGNRKKNAASLRRAIDSLFAHGIIGAHTEDLFYHGDPLETIQAYEDVLDEL
PFQAHLLVHEQVVDRVIQQDAMTRRKRFDFGAMKLFVDGSFGGRTALLSAPYADDRSQRGIEVHRPDHLEALVKKARTYG
MNVAAHVIGDAAVEQFVGLLEKYPAKKGTRDRIIHASLLNDTLINRIKSLPVLIDAQPVFLSDDMDMLFERLGNERVHDV
YRFKSLLDTGALVLGGSDAPISSVDVRKGLFGAVMRQSFHGSSTLNPSERLSMYEALRSFTYSPHVATGTHGRNGLLVQS
YNANFTVWDEDFFKLSGEDILHNRLVMTVVEGKPVYEAEKATM
>Mature_522_residues
GTLWVNGNIYTLNKPGEMERAMFIEHGRVLKMGDEGHLRRTYAGRIEEIVNLEGKSVYPAFTDSHIHLVGYGEALDRVDA
SEATDLRELLETMKQRGSDDDWIVAEGFDDRLLGDMPTREMIDAVIDDRPVVLKRVCRHVAVVNSKGLERLGLIHHTVIE
GGKLGRDEEGKLNGVLYDAALDLLYKELSGNRKKNAASLRRAIDSLFAHGIIGAHTEDLFYHGDPLETIQAYEDVLDELP
FQAHLLVHEQVVDRVIQQDAMTRRKRFDFGAMKLFVDGSFGGRTALLSAPYADDRSQRGIEVHRPDHLEALVKKARTYGM
NVAAHVIGDAAVEQFVGLLEKYPAKKGTRDRIIHASLLNDTLINRIKSLPVLIDAQPVFLSDDMDMLFERLGNERVHDVY
RFKSLLDTGALVLGGSDAPISSVDVRKGLFGAVMRQSFHGSSTLNPSERLSMYEALRSFTYSPHVATGTHGRNGLLVQSY
NANFTVWDEDFFKLSGEDILHNRLVMTVVEGKPVYEAEKATM

Specific function: Unknown

COG id: COG1574

COG function: function code R; Predicted metal-dependent hydrolase with the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: NA

Molecular weight: Translated: 58526; Mature: 58395

Theoretical pI: Translated: 6.07; Mature: 6.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGTLWVNGNIYTLNKPGEMERAMFIEHGRVLKMGDEGHLRRTYAGRIEEIVNLEGKSVYP
CCEEEECCEEEECCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEECC
AFTDSHIHLVGYGEALDRVDASEATDLRELLETMKQRGSDDDWIVAEGFDDRLLGDMPTR
CCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHH
EMIDAVIDDRPVVLKRVCRHVAVVNSKGLERLGLIHHTVIEGGKLGRDEEGKLNGVLYDA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
ALDLLYKELSGNRKKNAASLRRAIDSLFAHGIIGAHTEDLFYHGDPLETIQAYEDVLDEL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHC
PFQAHLLVHEQVVDRVIQQDAMTRRKRFDFGAMKLFVDGSFGGRTALLSAPYADDRSQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC
IEVHRPDHLEALVKKARTYGMNVAAHVIGDAAVEQFVGLLEKYPAKKGTRDRIIHASLLN
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHH
DTLINRIKSLPVLIDAQPVFLSDDMDMLFERLGNERVHDVYRFKSLLDTGALVLGGSDAP
HHHHHHHHCCCEEEECCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCC
ISSVDVRKGLFGAVMRQSFHGSSTLNPSERLSMYEALRSFTYSPHVATGTHGRNGLLVQS
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YNANFTVWDEDFFKLSGEDILHNRLVMTVVEGKPVYEAEKATM
CCCCEEEECHHHHHCCCCHHHHCCEEEEEECCCCCCCHHCCCC
>Mature Secondary Structure 
GTLWVNGNIYTLNKPGEMERAMFIEHGRVLKMGDEGHLRRTYAGRIEEIVNLEGKSVYP
CEEEECCEEEECCCCCCHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHCCCCCEECC
AFTDSHIHLVGYGEALDRVDASEATDLRELLETMKQRGSDDDWIVAEGFDDRLLGDMPTR
CCCCCEEEEEECCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHH
EMIDAVIDDRPVVLKRVCRHVAVVNSKGLERLGLIHHTVIEGGKLGRDEEGKLNGVLYDA
HHHHHHHCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
ALDLLYKELSGNRKKNAASLRRAIDSLFAHGIIGAHTEDLFYHGDPLETIQAYEDVLDEL
HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCEECCCHHHHHHHHHHHHHHC
PFQAHLLVHEQVVDRVIQQDAMTRRKRFDFGAMKLFVDGSFGGRTALLSAPYADDRSQRG
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCC
IEVHRPDHLEALVKKARTYGMNVAAHVIGDAAVEQFVGLLEKYPAKKGTRDRIIHASLLN
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHEEHHHHHH
DTLINRIKSLPVLIDAQPVFLSDDMDMLFERLGNERVHDVYRFKSLLDTGALVLGGSDAP
HHHHHHHHCCCEEEECCCEEECCCHHHHHHHHCCHHHHHHHHHHHHHCCCCEEECCCCCC
ISSVDVRKGLFGAVMRQSFHGSSTLNPSERLSMYEALRSFTYSPHVATGTHGRNGLLVQS
CCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEE
YNANFTVWDEDFFKLSGEDILHNRLVMTVVEGKPVYEAEKATM
CCCCEEEECHHHHHCCCCHHHHCCEEEEEECCCCCCCHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]