Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

Click here to switch to the map view.

The map label for this gene is 229916412

Identifier: 229916412

GI number: 229916412

Start: 635811

End: 636248

Strand: Direct

Name: 229916412

Synonym: EAT1b_0682

Alternate gene names: NA

Gene position: 635811-636248 (Clockwise)

Preceding gene: 229916409

Following gene: 229916417

Centisome position: 21.19

GC content: 46.12

Gene sequence:

>438_bases
ATGGCAATTGTATACAAACACATTTTATCTGCCGTTGACGGCTCTAAAGAGGCGGAACGTGCATTCGAAACAGCAATCGA
TGTCGCGATTCGTAACGAAGGGAAACTGTACGTCGGTCATGTGATTGATACGCGGACGTTTGCGACTGTAGAAGCGTACG
ATCGGACAATCACAGAGCGCGCCGAGACATATGCGAAAGAATTGCTTGAAGACTATGTCAATCGCGCGAAAGAGCGTGGC
GTAAAAGAAGTCGAGACAGTGATCGAATACGGCTCACCGAAAGTGACGATTGCGAAAAAGATTGCGCCTAATCATGATAT
TGATCTTATTATTTGTGGCGCGACAGGTTTAAACGCTGTAGAACGTTTCTTTATCGGAAGCGTCTCTGAAAGCATCGTCC
GTTATGCGAAATGTGACGTCCTCATCGTTCGTCAATAA

Upstream 100 bases:

>100_bases
ATTCACTCATTTTCATGGCGAAAAAGCGTGAAAACCGAAAGAAGTGGTATACTATATATGTAAGCCGAACGTATATTTCG
AGCGAAAGGTTGGGATTTAC

Downstream 100 bases:

>100_bases
TCATCCATCCATCAAAAAGGGTCTTGCGCAATCGCAAGACCCTTTTTGATGCATTACAACACCTTGACCGTAACCGTTTT
GCGACCAAATTGAATCGCCG

Product: UspA domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 145; Mature: 144

Protein sequence:

>145_residues
MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERG
VKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ

Sequences:

>Translated_145_residues
MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERG
VKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ
>Mature_144_residues
AIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITERAETYAKELLEDYVNRAKERGV
KEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAVERFFIGSVSESIVRYAKCDVLIVRQ

Specific function: Unknown

COG id: COG0589

COG function: function code T; Universal stress protein UspA and related nucleotide-binding proteins

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the universal stress protein A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014729
- InterPro:   IPR006015
- InterPro:   IPR006016 [H]

Pfam domain/function: PF00582 Usp [H]

EC number: NA

Molecular weight: Translated: 16181; Mature: 16049

Theoretical pI: Translated: 5.74; Mature: 5.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITER
CHHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AETYAKELLEDYVNRAKERGVKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCHHHH
ERFFIGSVSESIVRYAKCDVLIVRQ
HHHHHHHHHHHHHHHHHCCEEEEEC
>Mature Secondary Structure 
AIVYKHILSAVDGSKEAERAFETAIDVAIRNEGKLYVGHVIDTRTFATVEAYDRTITER
HHHHHHHHHHCCCCHHHHHHHHHHHHHEECCCCCEEEEEEECCCHHHHHHHHHHHHHHH
AETYAKELLEDYVNRAKERGVKEVETVIEYGSPKVTIAKKIAPNHDIDLIICGATGLNAV
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCEEEEEECCCCCCCEEEEECCCCHHHH
ERFFIGSVSESIVRYAKCDVLIVRQ
HHHHHHHHHHHHHHHHHCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA