Definition Exiguobacterium sp. AT1b, complete genome.
Accession NC_012673
Length 2,999,895

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The map label for this gene is ytoI [H]

Identifier: 229916408

GI number: 229916408

Start: 631535

End: 632845

Strand: Reverse

Name: ytoI [H]

Synonym: EAT1b_0678

Alternate gene names: 229916408

Gene position: 632845-631535 (Counterclockwise)

Preceding gene: 229916410

Following gene: 229916406

Centisome position: 21.1

GC content: 49.43

Gene sequence:

>1311_bases
ATGACCACAAAACATGAACAGATCATAGCACATATCGAGTCACTCGATGTTGGGTCAAAAATTTCGGTCCGCCAAATCGC
CAAAGAGTTGGCTGTATCAGAAGGTACGGCTTATCGGGCCATCAAGGAAGCTGAGAACCTAGGTTTCGTATCTACCATTG
AACGGGTGGGGACGATCCGGATTAAGCGAAAGCATAAAGAGAATATTGAAAAACTTACATTCGCCGAGGTCGTCAACATC
GTCGATGGTCAGGTGTTGGGCGGACGTAACGGCCTCCATAAGACGCTATCGAAATTTGTAATCGGTGCCATGAAGCTTGA
GGCGATGATGCGATATATCGATGTCGACTCACTCGTCATCATCGGGAACCGCGAGAAGGCGCATGAACTCGTCTTACAAT
CAGGTGGGGCTGTATTGATCACAGGGGGATTCGATACAACGGATGAAGTGAAACGGATGGCAGATAAGTATGATATGCCT
GTCATTTCTACATCCTACGACAGTTTTACCGTCGCGACGATGATCAACCGAGCCATCTATGACCGTCTAATCAAAAAAGA
GATTTTACTCGTCTCGGATATCGTCATCCCGCTCCACGATACGTTCTATCTGAAGTCGGATGACACGGTGAAACGTTGGC
ATGAGCTGAATGAACGGACGAAACATAATCGCTATCCCGTCATCGATGAACAGATGAAAGTGGTCGGTGTGATCACGGCA
AAGGATGTCATCGATAAATCACATGACTATGACATCGAGAAGGTCATGACCAAAAGCCCGATTACGGTGGGCGTACAAAC
GAGTGTCACCAATGCGGCACACCAGATGGTATGGGAAGGAATCGAGATGCTACCTGTCGTCGATAACTACGGACGTCTAC
TTGGGATTATTAGCCGTCAAGATGTGTTGAAGGCGTTGCAACTGGCGAACCGTCAACCGCAAGTCGGTGAGACGTTCGAT
AACATGATCACGAACCAGCTGAAAGAAGACCCTGCATCGAACGGGACGGCATTCACGGTTGAAGTGGCACCACAGATGAC
GAGTCATATGGGGACCGCCTCATCTGGCGTGTTGACGACGTTGTTGGTCGAAGGGGCGACGCGAAGTCTGCGTCATATGA
AAAAAGGCGACCTCGTGGTCGAGAATATCACCGTCTATTTCATGAAACCGATTCAAATTGAAAGTCAGATCCGAGTGTCG
GCCAATGTCTTCGACCTCGGGCGGAAGTTCGGGAAAGTGGATGTGGAGATGACGCAAGGGACACAACTTGTCGCCAAGGC
GCTCGTCACGGCACAACTCATCGACCGGTAA

Upstream 100 bases:

>100_bases
AAAGGAAATGTTGCAATTTGATTGGTACAGTTTGAACTAGTTCGACTGATACAGTATACTGAATAGAGTAGAAAATGTAT
TGAGAGAAGGGACTCCGCGT

Downstream 100 bases:

>100_bases
CGAAAAGAGCACCTGCTACGCACTGTAGCAGGTGCTCTGTTTCATGATGGCGTATTCGTCGGTTCTTCTGCGGCGAGTGG
GTAAATTTTGCGGTAACGGA

Product: signal transduction protein with CBS and DRTGG domains

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 436; Mature: 435

Protein sequence:

>436_residues
MTTKHEQIIAHIESLDVGSKISVRQIAKELAVSEGTAYRAIKEAENLGFVSTIERVGTIRIKRKHKENIEKLTFAEVVNI
VDGQVLGGRNGLHKTLSKFVIGAMKLEAMMRYIDVDSLVIIGNREKAHELVLQSGGAVLITGGFDTTDEVKRMADKYDMP
VISTSYDSFTVATMINRAIYDRLIKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITA
KDVIDKSHDYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQDVLKALQLANRQPQVGETFD
NMITNQLKEDPASNGTAFTVEVAPQMTSHMGTASSGVLTTLLVEGATRSLRHMKKGDLVVENITVYFMKPIQIESQIRVS
ANVFDLGRKFGKVDVEMTQGTQLVAKALVTAQLIDR

Sequences:

>Translated_436_residues
MTTKHEQIIAHIESLDVGSKISVRQIAKELAVSEGTAYRAIKEAENLGFVSTIERVGTIRIKRKHKENIEKLTFAEVVNI
VDGQVLGGRNGLHKTLSKFVIGAMKLEAMMRYIDVDSLVIIGNREKAHELVLQSGGAVLITGGFDTTDEVKRMADKYDMP
VISTSYDSFTVATMINRAIYDRLIKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITA
KDVIDKSHDYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQDVLKALQLANRQPQVGETFD
NMITNQLKEDPASNGTAFTVEVAPQMTSHMGTASSGVLTTLLVEGATRSLRHMKKGDLVVENITVYFMKPIQIESQIRVS
ANVFDLGRKFGKVDVEMTQGTQLVAKALVTAQLIDR
>Mature_435_residues
TTKHEQIIAHIESLDVGSKISVRQIAKELAVSEGTAYRAIKEAENLGFVSTIERVGTIRIKRKHKENIEKLTFAEVVNIV
DGQVLGGRNGLHKTLSKFVIGAMKLEAMMRYIDVDSLVIIGNREKAHELVLQSGGAVLITGGFDTTDEVKRMADKYDMPV
ISTSYDSFTVATMINRAIYDRLIKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITAK
DVIDKSHDYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQDVLKALQLANRQPQVGETFDN
MITNQLKEDPASNGTAFTVEVAPQMTSHMGTASSGVLTTLLVEGATRSLRHMKKGDLVVENITVYFMKPIQIESQIRVSA
NVFDLGRKFGKVDVEMTQGTQLVAKALVTAQLIDR

Specific function: Unknown

COG id: COG4109

COG function: function code K; Predicted transcriptional regulator containing CBS domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 CBS domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000644
- InterPro:   IPR010766
- InterPro:   IPR000524
- InterPro:   IPR006683
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03061 4HBT; PF00571 CBS; PF07085 DRTGG; PF00392 GntR [H]

EC number: NA

Molecular weight: Translated: 48593; Mature: 48462

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTKHEQIIAHIESLDVGSKISVRQIAKELAVSEGTAYRAIKEAENLGFVSTIERVGTIR
CCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHEE
IKRKHKENIEKLTFAEVVNIVDGQVLGGRNGLHKTLSKFVIGAMKLEAMMRYIDVDSLVI
EEHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGNREKAHELVLQSGGAVLITGGFDTTDEVKRMADKYDMPVISTSYDSFTVATMINRAIY
ECCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
DRLIKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITA
HHHHHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEH
KDVIDKSHDYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQ
HHHHCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHH
DVLKALQLANRQPQVGETFDNMITNQLKEDPASNGTAFTVEVAPQMTSHMGTASSGVLTT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCHHHH
LLVEGATRSLRHMKKGDLVVENITVYFMKPIQIESQIRVSANVFDLGRKFGKVDVEMTQG
HHHHHHHHHHHHHHCCCEEEEEEEEEEEECEEECCEEEEECHHHHHHHHHCCEEEEECCC
TQLVAKALVTAQLIDR
HHHHHHHHHHHHHHCC
>Mature Secondary Structure 
TTKHEQIIAHIESLDVGSKISVRQIAKELAVSEGTAYRAIKEAENLGFVSTIERVGTIR
CCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHEE
IKRKHKENIEKLTFAEVVNIVDGQVLGGRNGLHKTLSKFVIGAMKLEAMMRYIDVDSLVI
EEHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
IGNREKAHELVLQSGGAVLITGGFDTTDEVKRMADKYDMPVISTSYDSFTVATMINRAIY
ECCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHCCCCEEECCCCCCHHHHHHHHHHH
DRLIKKEILLVSDIVIPLHDTFYLKSDDTVKRWHELNERTKHNRYPVIDEQMKVVGVITA
HHHHHHHHHHHHHEEEECCCEEEECCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEEH
KDVIDKSHDYDIEKVMTKSPITVGVQTSVTNAAHQMVWEGIEMLPVVDNYGRLLGIISRQ
HHHHCCCCCCCHHHHHCCCCCEEEEEHHHHHHHHHHHHCCCHHEECHHHHHHHHHHHHHH
DVLKALQLANRQPQVGETFDNMITNQLKEDPASNGTAFTVEVAPQMTSHMGTASSGVLTT
HHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEECHHHHHHCCCCCCCHHHH
LLVEGATRSLRHMKKGDLVVENITVYFMKPIQIESQIRVSANVFDLGRKFGKVDVEMTQG
HHHHHHHHHHHHHHCCCEEEEEEEEEEEECEEECCEEEEECHHHHHHHHHCCEEEEECCC
TQLVAKALVTAQLIDR
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]