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The map label for this gene is nrnA [H]

Identifier: 229916406

GI number: 229916406

Start: 630135

End: 631103

Strand: Reverse

Name: nrnA [H]

Synonym: EAT1b_0676

Alternate gene names: 229916406

Gene position: 631103-630135 (Counterclockwise)

Preceding gene: 229916408

Following gene: 229916404

Centisome position: 21.04

GC content: 48.5

Gene sequence:

>969_bases
ATGACGCAATGGCAGGAAGCGGATACAATCAAATCAGAAATTGAGGCGGCTGACACCATTTTCATCCACCGCCATGTACG
ACCAGACCCTGATGCATTGGGGAGTCAGCTAGGTTTACAACGCATTTTAAAATCGGTTCATCCGGAGAAACAAATCTATG
TGGTCGGTGGCATGGTTCCAGACCTTGAGTTTTTAGGAAAGATGGAACATGTCGAAGAAGGAATGTATCAGGACGCGCTC
GTCCTTATTTTGGATACGGCGAATCAAGAGCGAATCGATGGACCGTTCGCATTGAAAGGGAAGACGATCATCAAAATCGA
TCATCATCCTGATGAAGATCCGTATGCGATGACACAGATTGTCGATACCTCGGTCAGTTCGACGTCTGAGATGATTGTGG
AACTCGCGGACATTTGGGGATATCCCATTGACCAAGAGGCGGCATTTTTACTCTATGCCGGCATCGTTGGCGACACAGGA
CGTTTCCAGTTTCGAAATGCTACGGCCCGAACGTTTGAGATTGCTTCGGCGCTGATTGCGAAAGACATCGACACGAATAA
ATTATATCGTCATATGTATAAAACGAATTTGGCGACCCTACAACTGCAAGGCTATGTATTACAGCATGTCCAAGTAACGG
AAGAGGGAGTCGGCTATGTGAAGATTGACAAGGACGTGCTTCGAACGTTCCATGCCTCTCCAGAAGCGGCGTCTCAACTC
GTCAATAGCTTCTCGGGTCTTGAGGGATTGAAATGTTGGGTCATGTTCGTGGAAAACAAAGAAGAGATTCGTGTGCGCAT
CCGGTCGAAAGGTCCTGTCATCAATGAAGTGGCCAAGCGATACCGTGGGGGCGGTCATCCGATGGCGGCCGGTGCCACGA
TTGACACATGGGATGAGATGGATGACGTGATTGCGGCTTTGAATGAAGTGGCAGGGGCATTCACGTTTGAAGAAAATGAA
GAGAGCTGA

Upstream 100 bases:

>100_bases
TGAGTCCAATCATGACAAGTTGCAAGTGAAGGAACCCCTTTCTATCTCGTAATCTGTTATCATCATACCATAATAGTGTG
TAGGAAAGTGAGGAATCATC

Downstream 100 bases:

>100_bases
CCGCGGTCAGCTCTCTTCATTTGTCTCCATTTTCTTGTGGGATGAACCATGTACCCCGGTCGGTCACATCCTCGACGACG
TCGAGCTGATATTCGGTAAT

Product: phosphoesterase RecJ domain protein

Products: NA

Alternate protein names: 3'(2'),5'-bisphosphate nucleotidase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; nanoRNAse [H]

Number of amino acids: Translated: 322; Mature: 321

Protein sequence:

>322_residues
MTQWQEADTIKSEIEAADTIFIHRHVRPDPDALGSQLGLQRILKSVHPEKQIYVVGGMVPDLEFLGKMEHVEEGMYQDAL
VLILDTANQERIDGPFALKGKTIIKIDHHPDEDPYAMTQIVDTSVSSTSEMIVELADIWGYPIDQEAAFLLYAGIVGDTG
RFQFRNATARTFEIASALIAKDIDTNKLYRHMYKTNLATLQLQGYVLQHVQVTEEGVGYVKIDKDVLRTFHASPEAASQL
VNSFSGLEGLKCWVMFVENKEEIRVRIRSKGPVINEVAKRYRGGGHPMAAGATIDTWDEMDDVIAALNEVAGAFTFEENE
ES

Sequences:

>Translated_322_residues
MTQWQEADTIKSEIEAADTIFIHRHVRPDPDALGSQLGLQRILKSVHPEKQIYVVGGMVPDLEFLGKMEHVEEGMYQDAL
VLILDTANQERIDGPFALKGKTIIKIDHHPDEDPYAMTQIVDTSVSSTSEMIVELADIWGYPIDQEAAFLLYAGIVGDTG
RFQFRNATARTFEIASALIAKDIDTNKLYRHMYKTNLATLQLQGYVLQHVQVTEEGVGYVKIDKDVLRTFHASPEAASQL
VNSFSGLEGLKCWVMFVENKEEIRVRIRSKGPVINEVAKRYRGGGHPMAAGATIDTWDEMDDVIAALNEVAGAFTFEENE
ES
>Mature_321_residues
TQWQEADTIKSEIEAADTIFIHRHVRPDPDALGSQLGLQRILKSVHPEKQIYVVGGMVPDLEFLGKMEHVEEGMYQDALV
LILDTANQERIDGPFALKGKTIIKIDHHPDEDPYAMTQIVDTSVSSTSEMIVELADIWGYPIDQEAAFLLYAGIVGDTGR
FQFRNATARTFEIASALIAKDIDTNKLYRHMYKTNLATLQLQGYVLQHVQVTEEGVGYVKIDKDVLRTFHASPEAASQLV
NSFSGLEGLKCWVMFVENKEEIRVRIRSKGPVINEVAKRYRGGGHPMAAGATIDTWDEMDDVIAALNEVAGAFTFEENEE
S

Specific function: Bifunctional enzyme which has both oligoribonuclease and pAp-phosphatase activities. Degrades RNA oligonucleotides with a length of 5 nucleotides and shorter. Converts 3'(2')- phosphoadenosine 5'-phosphate (PAP) to AMP [H]

COG id: COG0618

COG function: function code R; Exopolyphosphatase-related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003156
- InterPro:   IPR001667 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: =3.1.3.7 [H]

Molecular weight: Translated: 36001; Mature: 35870

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQWQEADTIKSEIEAADTIFIHRHVRPDPDALGSQLGLQRILKSVHPEKQIYVVGGMVP
CCCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DLEFLGKMEHVEEGMYQDALVLILDTANQERIDGPFALKGKTIIKIDHHPDEDPYAMTQI
CHHHHHHHHHHHHCHHCCEEEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHH
VDTSVSSTSEMIVELADIWGYPIDQEAAFLLYAGIVGDTGRFQFRNATARTFEIASALIA
HHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHH
KDIDTNKLYRHMYKTNLATLQLQGYVLQHVQVTEEGVGYVKIDKDVLRTFHASPEAASQL
CCCCHHHHHHHHHHCCCEEEEECHHHEEHEEECCCCCCEEEECHHHHHHHCCCHHHHHHH
VNSFSGLEGLKCWVMFVENKEEIRVRIRSKGPVINEVAKRYRGGGHPMAAGATIDTWDEM
HHHHCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
DDVIAALNEVAGAFTFEENEES
HHHHHHHHHHHHCEEECCCCCC
>Mature Secondary Structure 
TQWQEADTIKSEIEAADTIFIHRHVRPDPDALGSQLGLQRILKSVHPEKQIYVVGGMVP
CCCCHHHHHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
DLEFLGKMEHVEEGMYQDALVLILDTANQERIDGPFALKGKTIIKIDHHPDEDPYAMTQI
CHHHHHHHHHHHHCHHCCEEEEEEECCCCCCCCCCEEECCCEEEEECCCCCCCCHHHHHH
VDTSVSSTSEMIVELADIWGYPIDQEAAFLLYAGIVGDTGRFQFRNATARTFEIASALIA
HHHHHCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCEEECCCCHHHHHHHHHHHH
KDIDTNKLYRHMYKTNLATLQLQGYVLQHVQVTEEGVGYVKIDKDVLRTFHASPEAASQL
CCCCHHHHHHHHHHCCCEEEEECHHHEEHEEECCCCCCEEEECHHHHHHHCCCHHHHHHH
VNSFSGLEGLKCWVMFVENKEEIRVRIRSKGPVINEVAKRYRGGGHPMAAGATIDTWDEM
HHHHCCCCCCEEEEEEECCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHH
DDVIAALNEVAGAFTFEENEES
HHHHHHHHHHHHCEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]