| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yeaL [C]
Identifier: 229916398
GI number: 229916398
Start: 620730
End: 621194
Strand: Reverse
Name: yeaL [C]
Synonym: EAT1b_0668
Alternate gene names: 229916398
Gene position: 621194-620730 (Counterclockwise)
Preceding gene: 229916399
Following gene: 229916397
Centisome position: 20.71
GC content: 47.31
Gene sequence:
>465_bases ATGAGTGCATATCTATTTTTATTGATGCTCGTCTTGATTGGTGTCATTTCAAATAACCAATCTGTCATTATCGCAAGTAG CGTCTTGTTGATCATCAAAGCAATCGGTTTCGGCGATCAATTGTTCCCGACACTTGCATCGAAAGGAATCAGCTGGGGTG TGACGATCATTACCATTGCAGTCCTCGTCCCGATTGCGACCGGCGATATCGGATTTAAAGAATTGTGGAATAGTATTAAA GGTCCGGTCGGAATCGTCGCGTTTGCTTCAGGGATGTTCGTCGCCATTGCTGCAGGGCAAGGTGTCCAACTGATGCGTGT CGACCCGGTCGTCACCACGGCGCTCCTTGCAGGTACGATTTTAGCGGTTGGATTCATGAAAGGGATCCCCGTTGGACCGC TTGTTGGAGCTGGGATTGCGGCATTGATTTTAGGTGGATATCAAGTCATTGAAAAATGGTTTTGA
Upstream 100 bases:
>100_bases GACCCACTCACAGGTAAAATCTACAACGCATAATTGAACGACAATCGAACCGGCCTTCTACAAAGGTCGGTTCTTTTTCC GTTCGAAGAAAGGAATACGT
Downstream 100 bases:
>100_bases TATTTTCTGACAACTGAAGCCGCTTACATTTCTTTTTTGCAATAAATTGTTTATACTATATAAAGGACAGGGTAAACGGA GACTGGGTGAATGCAGGGGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 154; Mature: 153
Protein sequence:
>154_residues MSAYLFLLMLVLIGVISNNQSVIIASSVLLIIKAIGFGDQLFPTLASKGISWGVTIITIAVLVPIATGDIGFKELWNSIK GPVGIVAFASGMFVAIAAGQGVQLMRVDPVVTTALLAGTILAVGFMKGIPVGPLVGAGIAALILGGYQVIEKWF
Sequences:
>Translated_154_residues MSAYLFLLMLVLIGVISNNQSVIIASSVLLIIKAIGFGDQLFPTLASKGISWGVTIITIAVLVPIATGDIGFKELWNSIK GPVGIVAFASGMFVAIAAGQGVQLMRVDPVVTTALLAGTILAVGFMKGIPVGPLVGAGIAALILGGYQVIEKWF >Mature_153_residues SAYLFLLMLVLIGVISNNQSVIIASSVLLIIKAIGFGDQLFPTLASKGISWGVTIITIAVLVPIATGDIGFKELWNSIKG PVGIVAFASGMFVAIAAGQGVQLMRVDPVVTTALLAGTILAVGFMKGIPVGPLVGAGIAALILGGYQVIEKWF
Specific function: Unknown
COG id: COG2707
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential)
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0756 family
Homologues:
Organism=Escherichia coli, GI1788090, Length=130, Percent_Identity=38.4615384615385, Blast_Score=80, Evalue=4e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y668_EXISA (C4L477)
Other databases:
- EMBL: CP001615 - RefSeq: YP_002885044.1 - GeneID: 7871440 - GenomeReviews: CP001615_GR - KEGG: eat:EAT1b_0668 - OMA: VIKITPL - ProtClustDB: CLSK870236 - HAMAP: MF_01874 - InterPro: IPR007382 - ProDom: PD021096
Pfam domain/function: PF04284 DUF441
EC number: NA
Molecular weight: Translated: 15869; Mature: 15738
Theoretical pI: Translated: 9.73; Mature: 9.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0x26079f84)-; HASH(0x24f7c914)-; HASH(0x25d63ff0)-; HASH(0x240c18cc)-; HASH(0x25d63660)-;
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAYLFLLMLVLIGVISNNQSVIIASSVLLIIKAIGFGDQLFPTLASKGISWGVTIITIA CHHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH VLVPIATGDIGFKELWNSIKGPVGIVAFASGMFVAIAAGQGVQLMRVDPVVTTALLAGTI HHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHH LAVGFMKGIPVGPLVGAGIAALILGGYQVIEKWF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCH >Mature Secondary Structure SAYLFLLMLVLIGVISNNQSVIIASSVLLIIKAIGFGDQLFPTLASKGISWGVTIITIA HHHHHHHHHHHHHHHCCCCCEEHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHH VLVPIATGDIGFKELWNSIKGPVGIVAFASGMFVAIAAGQGVQLMRVDPVVTTALLAGTI HHHHHCCCCCCHHHHHHHHCCCHHHHHHHCCCEEEEECCCCEEEEEECHHHHHHHHHHHH LAVGFMKGIPVGPLVGAGIAALILGGYQVIEKWF HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA