| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916351
Identifier: 229916351
GI number: 229916351
Start: 573309
End: 574490
Strand: Reverse
Name: 229916351
Synonym: EAT1b_0621
Alternate gene names: NA
Gene position: 574490-573309 (Counterclockwise)
Preceding gene: 229916352
Following gene: 229916350
Centisome position: 19.15
GC content: 50.25
Gene sequence:
>1182_bases ATGGTCGTATTTAAACCGTTCAGCCCTTATATGCCAACGCATCCGGAACGTGTCGCCGCAGACCCGTATGATGTCGTATC GATTGAAGAAGCGCAAGCCGTCATTTCAGAAAATCCCGATTCCTTTTTAGCAGTGGATAAGCCAGAAGCGCTTCAATCCG ACCTTTCCCTTGAGAAGTGGGGGGAGCTGGCGCGTCATGAGCTAGAACGTCTCTATGAAAAGGAATTGACGGAACGTCCG AACGGATTTTACATCTATCGATTGACATCGGGACAACGTCAGCAAACGGGTCTAGTCGCCACCTTTTCAGTCGCGGATTA TGAAGCCGGTCGCATCAAGATTCACGAACATACACGGGAAACGAAGGAGCGGGAACGTGTCGAGCATGTCCGGGCGACGC GAGCGCACACCGGTCCGATTCTACTCAGTCATCCTCCACATGCAAACTTGAAGCAAATCTTACATAAAGCGACTGACGGA GACCCGTTATTCTCGTTCACGGATGAACGAGGCGTCATGCATGAAGGATTCATGATTCCGAACCGTGAACTCGCTCGTGT CATGATGATTGGCGCGACCATCCCGTCGATCTACATTGCGGATGGACATCATCGTGCGAAAGCGGCAGCGGTCGTTTCCG GGATGAGTGGGGATCGTTCTCAAAAGAATGAACGTTCACACTTCTTAGGTGTCCTCTTCCCGAGTGACGAATTGACAATC TTGCCGTATCATCGCGTGCTGACAGCGATAAGTCCTGAAGAGGTAGAGAATATGTTAGACGGACTCTCGTTTTCATACAT GATCAAGGAAGAGGAACGTCTTGTCCTGCCGAATGAACATGGCGTCTTCGGAGTCGCCTATCGAGGGAAGTATTATAAGT TGACGAAACGGCAAGAAGACCCGGCGCTCGACGTTACCATCTTACAGCGAGATATGCTTACGCCATACTTCAACGTTGAA GATATCCGTACGGATGCGAGAGTCGATTTTGTCGGTGGAAACAAGACGGTCGTTGAATTAGAGAAGCTGACTCAGGTGCC GGACCGATTGCTTTTCACCTGTCACGAAACGACGATGACACAACTGATGCGCGTGGCGGATGACGGTGGTCAGATGCCTC CAAAATCGACCTGGTTCGAGCCGAAATTGAAGAGTGGATTATTCATTCATCGATTCGATTGA
Upstream 100 bases:
>100_bases TGATTGATTTAGACAACAGCGAGCATGAACCGTTATCGATTCATGCGCTGTATGAAATACAGGGCGTCATTCGCGTCCGG GAATTTTAAGGAGGATCCTT
Downstream 100 bases:
>100_bases TGGCGCAGGCTGGAAAGAACAGACGAAAAGCGTTATAAATGGAATGAGAAGAAAGGGGTGGCCGAAATTGGCTAAAGCCG TATATCTTCACATTCCATTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 393; Mature: 393
Protein sequence:
>393_residues MVVFKPFSPYMPTHPERVAADPYDVVSIEEAQAVISENPDSFLAVDKPEALQSDLSLEKWGELARHELERLYEKELTERP NGFYIYRLTSGQRQQTGLVATFSVADYEAGRIKIHEHTRETKERERVEHVRATRAHTGPILLSHPPHANLKQILHKATDG DPLFSFTDERGVMHEGFMIPNRELARVMMIGATIPSIYIADGHHRAKAAAVVSGMSGDRSQKNERSHFLGVLFPSDELTI LPYHRVLTAISPEEVENMLDGLSFSYMIKEEERLVLPNEHGVFGVAYRGKYYKLTKRQEDPALDVTILQRDMLTPYFNVE DIRTDARVDFVGGNKTVVELEKLTQVPDRLLFTCHETTMTQLMRVADDGGQMPPKSTWFEPKLKSGLFIHRFD
Sequences:
>Translated_393_residues MVVFKPFSPYMPTHPERVAADPYDVVSIEEAQAVISENPDSFLAVDKPEALQSDLSLEKWGELARHELERLYEKELTERP NGFYIYRLTSGQRQQTGLVATFSVADYEAGRIKIHEHTRETKERERVEHVRATRAHTGPILLSHPPHANLKQILHKATDG DPLFSFTDERGVMHEGFMIPNRELARVMMIGATIPSIYIADGHHRAKAAAVVSGMSGDRSQKNERSHFLGVLFPSDELTI LPYHRVLTAISPEEVENMLDGLSFSYMIKEEERLVLPNEHGVFGVAYRGKYYKLTKRQEDPALDVTILQRDMLTPYFNVE DIRTDARVDFVGGNKTVVELEKLTQVPDRLLFTCHETTMTQLMRVADDGGQMPPKSTWFEPKLKSGLFIHRFD >Mature_393_residues MVVFKPFSPYMPTHPERVAADPYDVVSIEEAQAVISENPDSFLAVDKPEALQSDLSLEKWGELARHELERLYEKELTERP NGFYIYRLTSGQRQQTGLVATFSVADYEAGRIKIHEHTRETKERERVEHVRATRAHTGPILLSHPPHANLKQILHKATDG DPLFSFTDERGVMHEGFMIPNRELARVMMIGATIPSIYIADGHHRAKAAAVVSGMSGDRSQKNERSHFLGVLFPSDELTI LPYHRVLTAISPEEVENMLDGLSFSYMIKEEERLVLPNEHGVFGVAYRGKYYKLTKRQEDPALDVTILQRDMLTPYFNVE DIRTDARVDFVGGNKTVVELEKLTQVPDRLLFTCHETTMTQLMRVADDGGQMPPKSTWFEPKLKSGLFIHRFD
Specific function: Unknown
COG id: COG4198
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44803; Mature: 44803
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVVFKPFSPYMPTHPERVAADPYDVVSIEEAQAVISENPDSFLAVDKPEALQSDLSLEKW CEEECCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHH GELARHELERLYEKELTERPNGFYIYRLTSGQRQQTGLVATFSVADYEAGRIKIHEHTRE HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEHHHHH TKERERVEHVRATRAHTGPILLSHPPHANLKQILHKATDGDPLFSFTDERGVMHEGFMIP HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCEECC NRELARVMMIGATIPSIYIADGHHRAKAAAVVSGMSGDRSQKNERSHFLGVLFPSDELTI CHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE LPYHRVLTAISPEEVENMLDGLSFSYMIKEEERLVLPNEHGVFGVAYRGKYYKLTKRQED EEHHHHHHCCCHHHHHHHHCCCCEEEEEECCCEEECCCCCCEEEEEECCEEEEECCCCCC PALDVTILQRDMLTPYFNVEDIRTDARVDFVGGNKTVVELEKLTQVPDRLLFTCHETTMT CCCEEEEEHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEHHHHHCCCHHHEEEECHHHHH QLMRVADDGGQMPPKSTWFEPKLKSGLFIHRFD HHHHHHCCCCCCCCCCCCCCCHHHCCEEEEECC >Mature Secondary Structure MVVFKPFSPYMPTHPERVAADPYDVVSIEEAQAVISENPDSFLAVDKPEALQSDLSLEKW CEEECCCCCCCCCCCHHHCCCCCCEEEHHHHHHHHHCCCCCEEEECCCHHHHHCCCHHHH GELARHELERLYEKELTERPNGFYIYRLTSGQRQQTGLVATFSVADYEAGRIKIHEHTRE HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCEEEEEEECCCCCCEEEEEHHHHH TKERERVEHVRATRAHTGPILLSHPPHANLKQILHKATDGDPLFSFTDERGVMHEGFMIP HHHHHHHHHHHHHCCCCCCEEEECCCCCHHHHHHHHCCCCCCCEEECCCCCCEECCEECC NRELARVMMIGATIPSIYIADGHHRAKAAAVVSGMSGDRSQKNERSHFLGVLFPSDELTI CHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCEEE LPYHRVLTAISPEEVENMLDGLSFSYMIKEEERLVLPNEHGVFGVAYRGKYYKLTKRQED EEHHHHHHCCCHHHHHHHHCCCCEEEEEECCCEEECCCCCCEEEEEECCEEEEECCCCCC PALDVTILQRDMLTPYFNVEDIRTDARVDFVGGNKTVVELEKLTQVPDRLLFTCHETTMT CCCEEEEEHHHHCCCCCCHHHCCCCCEEEEECCCCEEEEHHHHHCCCHHHEEEECHHHHH QLMRVADDGGQMPPKSTWFEPKLKSGLFIHRFD HHHHHHCCCCCCCCCCCCCCCHHHCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA