| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is pstS [H]
Identifier: 229916295
GI number: 229916295
Start: 510933
End: 511871
Strand: Reverse
Name: pstS [H]
Synonym: EAT1b_0564
Alternate gene names: 229916295
Gene position: 511871-510933 (Counterclockwise)
Preceding gene: 229916296
Following gene: 229916294
Centisome position: 17.06
GC content: 47.82
Gene sequence:
>939_bases ATGTCTTGGATGAAAAAATCAGCTTTACTCGCTTCAATCACTTCAGTCGCACTCGTAGGTGCTGCTTGTGGGAACAATGA AGAAGGTGGCGCTGCTGAAGGCGGCGATGCGCTCTCAGGAAAAGTCGTCATGGACGGATCATCAACTGTATTCCCAATCA TGGAAGCAGTCGCAGAAGAATATTCAGCTGAACAACCAGAAGTTGAAGTGACAGTCGGTGTCTCTGGTACGGGTGGTGGC TTCAAACGTTTCGTGACGGGAGAGACAGACTTCTCAAACGCATCACGTGAAATCAAGGAAGAAGAAGCAGCCGAAGCTGA GAAAAACGGTGTGGAATTCACGCAACTCTCAGTTGCACTTGATGGACTTTCGCTCGTTGTAAACCCAGCGAACGATTGGG CACAAGATATCACGATTGAAGAATTGAATAAGATGTGGACGGACACGAGCATCAAGACGTGGAAAGACGTTCGCTCAGAC TGGCCAGATGAGGAGATCTCATTCTTCGCACCAGGTAAAGACTCAGGTACATTTGACTTCTTCAATGAAGCCGTTCTCGA CGATACGGATATTCGTGAAGACGCACAATTGTCAGAGGATGACAACGTCCTCGTCACTGGTGTAGCCGGAACAGAAGGAG CAATCGGATTCTTCGGATATGCATACTACATCGAAAACCAAGATACGCTTCGTGCCATGGCGGTTGAGGGTGTAGAGCCA ACTCCAGAAACAATCAATGACCTTTCTTATCCACTCTCACGTGAGATCTACACGTATGTCAACAACGCTTCGTTGAAAGA CAAAGAGCAGGTTGCGGACTTCGCACGCTTCATGAATGAAAACGCGGGTGCGCTAGCTGAAGAAGTAGGATATGTCGGTA TGGAACAAGCGCGTTACGACGAAAACATGAAGATGATCGACGAAATCGCTGGAGAATAA
Upstream 100 bases:
>100_bases GTTTATTTCTCGTTAATAGAAGTTCATTAGGATATTAATTGTAGGACAGAACAACAAATCCACAACAAAAATCAAAGCAA ACTCAAGGAGGACGTCACAA
Downstream 100 bases:
>100_bases GATGATAGGTGGCAGAAGGTGAGACACGGTCTCGCCTTCTCGCCATGCTTTCTAGTATGAAGAGGTAGGGAGCGATACAC GAGATGAATGAACCGAACAA
Product: phosphate binding protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 312; Mature: 311
Protein sequence:
>312_residues MSWMKKSALLASITSVALVGAACGNNEEGGAAEGGDALSGKVVMDGSSTVFPIMEAVAEEYSAEQPEVEVTVGVSGTGGG FKRFVTGETDFSNASREIKEEEAAEAEKNGVEFTQLSVALDGLSLVVNPANDWAQDITIEELNKMWTDTSIKTWKDVRSD WPDEEISFFAPGKDSGTFDFFNEAVLDDTDIREDAQLSEDDNVLVTGVAGTEGAIGFFGYAYYIENQDTLRAMAVEGVEP TPETINDLSYPLSREIYTYVNNASLKDKEQVADFARFMNENAGALAEEVGYVGMEQARYDENMKMIDEIAGE
Sequences:
>Translated_312_residues MSWMKKSALLASITSVALVGAACGNNEEGGAAEGGDALSGKVVMDGSSTVFPIMEAVAEEYSAEQPEVEVTVGVSGTGGG FKRFVTGETDFSNASREIKEEEAAEAEKNGVEFTQLSVALDGLSLVVNPANDWAQDITIEELNKMWTDTSIKTWKDVRSD WPDEEISFFAPGKDSGTFDFFNEAVLDDTDIREDAQLSEDDNVLVTGVAGTEGAIGFFGYAYYIENQDTLRAMAVEGVEP TPETINDLSYPLSREIYTYVNNASLKDKEQVADFARFMNENAGALAEEVGYVGMEQARYDENMKMIDEIAGE >Mature_311_residues SWMKKSALLASITSVALVGAACGNNEEGGAAEGGDALSGKVVMDGSSTVFPIMEAVAEEYSAEQPEVEVTVGVSGTGGGF KRFVTGETDFSNASREIKEEEAAEAEKNGVEFTQLSVALDGLSLVVNPANDWAQDITIEELNKMWTDTSIKTWKDVRSDW PDEEISFFAPGKDSGTFDFFNEAVLDDTDIREDAQLSEDDNVLVTGVAGTEGAIGFFGYAYYIENQDTLRAMAVEGVEPT PETINDLSYPLSREIYTYVNNASLKDKEQVADFARFMNENAGALAEEVGYVGMEQARYDENMKMIDEIAGE
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33826; Mature: 33695
Theoretical pI: Translated: 3.74; Mature: 3.74
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSWMKKSALLASITSVALVGAACGNNEEGGAAEGGDALSGKVVMDGSSTVFPIMEAVAEE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH YSAEQPEVEVTVGVSGTGGGFKRFVTGETDFSNASREIKEEEAAEAEKNGVEFTQLSVAL HCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE DGLSLVVNPANDWAQDITIEELNKMWTDTSIKTWKDVRSDWPDEEISFFAPGKDSGTFDF CCEEEEEECCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHH FNEAVLDDTDIREDAQLSEDDNVLVTGVAGTEGAIGFFGYAYYIENQDTLRAMAVEGVEP HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHCCCCC TPETINDLSYPLSREIYTYVNNASLKDKEQVADFARFMNENAGALAEEVGYVGMEQARYD CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH ENMKMIDEIAGE CHHHHHHHHHCC >Mature Secondary Structure SWMKKSALLASITSVALVGAACGNNEEGGAAEGGDALSGKVVMDGSSTVFPIMEAVAEE CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEECCCCCHHHHHHHHHHH YSAEQPEVEVTVGVSGTGGGFKRFVTGETDFSNASREIKEEEAAEAEKNGVEFTQLSVAL HCCCCCCEEEEEEECCCCCCCEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEE DGLSLVVNPANDWAQDITIEELNKMWTDTSIKTWKDVRSDWPDEEISFFAPGKDSGTFDF CCEEEEEECCHHHHHCCCHHHHHHHHCCCCHHHHHHHHHCCCCCCEEEECCCCCCCCHHH FNEAVLDDTDIREDAQLSEDDNVLVTGVAGTEGAIGFFGYAYYIENQDTLRAMAVEGVEP HHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHCCCCC TPETINDLSYPLSREIYTYVNNASLKDKEQVADFARFMNENAGALAEEVGYVGMEQARYD CHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHH ENMKMIDEIAGE CHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA