| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqgH [H]
Identifier: 229916294
GI number: 229916294
Start: 509905
End: 510849
Strand: Reverse
Name: yqgH [H]
Synonym: EAT1b_0563
Alternate gene names: 229916294
Gene position: 510849-509905 (Counterclockwise)
Preceding gene: 229916295
Following gene: 229916293
Centisome position: 17.03
GC content: 46.35
Gene sequence:
>945_bases ATGAATGAACCGAACAATAAGCTTTCGATTCGAGAGATGATTCAACAAAATAAACAAAAGAAATATAGTACGACGAACGT GTTTGATAAAATCATGCCGTTCTTATTATTCTTGAGCGCATTCGTATCGGTCGTCACGACCATTGGTATTGCGTTCACAT TAGGCTTTGAGCTATTCAAGTTCTTTGAACGAGTCCCTGTCGCAGAATTTTTAGGATCGACAGAATGGTACCCGCTTAGT GCAGATCAGCGCTTCGGGGTATGGGCCCTTGTGATGGGAACACTCCAAATTACTGTGATTGCGATGATTGTAGCCGTCCC ACTCGGTTTGGCGTCTGCGATTTACTTAAGTGAATACGCCTCTGAACGGGCACGACGTGTGTTGAAACCAATTCTAGAAG TGTTGGCCGGTGTGCCGACGATCGTATTCGGTTTCTTCGCCTTGTCATTCATTACACCGATTTTGCAAGCACTCATCCCA GGACTTCAAATTTACAATGCACTCAGCCCAGGGATTGTCGTCGGGATTATGATTATTCCGATGATTGCCTCGATTTCTGA GGATGCAATGAGTGCTGTTCCGAAGAAAATTCGGGACGGTGCGCTCGGTTTAGGTGCGACACGTCTTGAAGTGGCGACGA AAGTTGTTATGCCTGCAGCGACGTCTGGAATCATTGCCTCTATCGTTCTCGGTATGAGCCGTGCGATTGGTGAGACGATG ATTGTAACGATCGCTGGTGGTTCACAGCCGAACTTTGAGTTCAATCCGCTCAATGCGATTCAGACGATGACAGCATATAT CGTTCAAATCGCAAAAGGTGATGCAGGTTACGGCACAATCGAATATTACAGTATCTATGCGGTCGGTGCGTTGTTGTTTG TCTTTACCCTATTGATGAACCTATTCGCAAACTGGGTGACGCGCCGCTTCAGAGAGGAGTACTAA
Upstream 100 bases:
>100_bases AAATCGCTGGAGAATAAGATGATAGGTGGCAGAAGGTGAGACACGGTCTCGCCTTCTCGCCATGCTTTCTAGTATGAAGA GGTAGGGAGCGATACACGAG
Downstream 100 bases:
>100_bases TATGGCTTTACCGAACAGTGAGTTCAAGAATACGAAGAACTTGATGAATCGTGAGACCGTGTCTCAACGAATTAAACGAC GTTTACAATTGAATGAAATA
Product: phosphate ABC transporter inner membrane subunit PstC
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 314; Mature: 314
Protein sequence:
>314_residues MNEPNNKLSIREMIQQNKQKKYSTTNVFDKIMPFLLFLSAFVSVVTTIGIAFTLGFELFKFFERVPVAEFLGSTEWYPLS ADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALSFITPILQALIP GLQIYNALSPGIVVGIMIIPMIASISEDAMSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETM IVTIAGGSQPNFEFNPLNAIQTMTAYIVQIAKGDAGYGTIEYYSIYAVGALLFVFTLLMNLFANWVTRRFREEY
Sequences:
>Translated_314_residues MNEPNNKLSIREMIQQNKQKKYSTTNVFDKIMPFLLFLSAFVSVVTTIGIAFTLGFELFKFFERVPVAEFLGSTEWYPLS ADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALSFITPILQALIP GLQIYNALSPGIVVGIMIIPMIASISEDAMSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETM IVTIAGGSQPNFEFNPLNAIQTMTAYIVQIAKGDAGYGTIEYYSIYAVGALLFVFTLLMNLFANWVTRRFREEY >Mature_314_residues MNEPNNKLSIREMIQQNKQKKYSTTNVFDKIMPFLLFLSAFVSVVTTIGIAFTLGFELFKFFERVPVAEFLGSTEWYPLS ADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYASERARRVLKPILEVLAGVPTIVFGFFALSFITPILQALIP GLQIYNALSPGIVVGIMIIPMIASISEDAMSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETM IVTIAGGSQPNFEFNPLNAIQTMTAYIVQIAKGDAGYGTIEYYSIYAVGALLFVFTLLMNLFANWVTRRFREEY
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0573
COG function: function code P; ABC-type phosphate transport system, permease component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790164, Length=295, Percent_Identity=29.4915254237288, Blast_Score=105, Evalue=3e-24, Organism=Escherichia coli, GI1790163, Length=233, Percent_Identity=25.3218884120172, Blast_Score=67, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 34340; Mature: 34340
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEPNNKLSIREMIQQNKQKKYSTTNVFDKIMPFLLFLSAFVSVVTTIGIAFTLGFELFK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFERVPVAEFLGSTEWYPLSADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYA HHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SERARRVLKPILEVLAGVPTIVFGFFALSFITPILQALIPGLQIYNALSPGIVVGIMIIP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MIASISEDAMSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETM HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IVTIAGGSQPNFEFNPLNAIQTMTAYIVQIAKGDAGYGTIEYYSIYAVGALLFVFTLLMN EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LFANWVTRRFREEY HHHHHHHHHHHHCC >Mature Secondary Structure MNEPNNKLSIREMIQQNKQKKYSTTNVFDKIMPFLLFLSAFVSVVTTIGIAFTLGFELFK CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFERVPVAEFLGSTEWYPLSADQRFGVWALVMGTLQITVIAMIVAVPLGLASAIYLSEYA HHHHCCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SERARRVLKPILEVLAGVPTIVFGFFALSFITPILQALIPGLQIYNALSPGIVVGIMIIP HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH MIASISEDAMSAVPKKIRDGALGLGATRLEVATKVVMPAATSGIIASIVLGMSRAIGETM HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEE IVTIAGGSQPNFEFNPLNAIQTMTAYIVQIAKGDAGYGTIEYYSIYAVGALLFVFTLLMN EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH LFANWVTRRFREEY HHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]