| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is ypgQ [H]
Identifier: 229916225
GI number: 229916225
Start: 450668
End: 451243
Strand: Reverse
Name: ypgQ [H]
Synonym: EAT1b_0494
Alternate gene names: 229916225
Gene position: 451243-450668 (Counterclockwise)
Preceding gene: 229916226
Following gene: 229916222
Centisome position: 15.04
GC content: 47.57
Gene sequence:
>576_bases GTGGACGTGATACAAGCGACGAGAAAGTTCGTCGAAACAATTCATGCAAATGATCAGACGGGTCATGATATTGCCCACAT CGAGCGGGTCGTTCGACTCGTAGAGCGCTTGATGGAAAATGAACCGGTCGATCGAACGGGACTTCTGTTAGCCGCTTATT TACATGACGTCGAAGACCATAAGCTCGGTCGTCCAAAAGAGCTCGTCAAACAACATTTGGCTTCTCTCGACATCACAGAG GAGCGAGCGAGTTTCGTGGAAGCGTTGATTGATGAGGTTTCTTTTTCAAAAGGCATGACACCAACGACTCGCGAAAGTGA AATCCTACAAGATGCCGACCGCCTTGATGCGATTGGGGCCATCGGTATTGCGCGAACGTTCCAATTCGCGGGTTCTCGCG GTACACCTCTTGATTTGTCAGAGGATAGTGCGATTCAACATTTTCAAGATAAGTTATTGAAGTTAGCGTCGATGATGCAT ACGAAAGAAGCGAAACGCTTGGCACATTCACGTCATGTCTTCATGGAAAGGTTCTACAACCAGTTTCATGAAGAATGGGA CGGGATGGATACATGA
Upstream 100 bases:
>100_bases ATACGTTCCCGCCGATTAAACAAGATGCTCAGGCATTTTGTGACCAATTGCACCGTCGAGGTCTCTTGATTGAACCGAAT ACGACGATCGAGATTTGAGT
Downstream 100 bases:
>100_bases AAGGGACGACCGATTGATTTCGGTCGTCCCTTTTTCTAGGTTAGAATGGATGTTTGTTGAGCCAATGTCCACCGTCTAAT GAAATACAATCTCCGTTCAA
Product: metal dependent phosphohydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 191; Mature: 191
Protein sequence:
>191_residues MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT
Sequences:
>Translated_191_residues MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT >Mature_191_residues MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDHKLGRPKELVKQHLASLDITE ERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGAIGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMH TKEAKRLAHSRHVFMERFYNQFHEEWDGMDT
Specific function: Unknown
COG id: COG1418
COG function: function code R; Predicted HD superfamily hydrolase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 HD domain [H]
Homologues:
Organism=Escherichia coli, GI1788273, Length=209, Percent_Identity=33.0143540669856, Blast_Score=97, Evalue=8e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003607 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21835; Mature: 21835
Theoretical pI: Translated: 5.52; Mature: 5.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDH CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KLGRPKELVKQHLASLDITEERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGA CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMHTKEAKRLAHSRHVFMERFYN HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFHEEWDGMDT HHHHHHCCCCC >Mature Secondary Structure MDVIQATRKFVETIHANDQTGHDIAHIERVVRLVERLMENEPVDRTGLLLAAYLHDVEDH CCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHC KLGRPKELVKQHLASLDITEERASFVEALIDEVSFSKGMTPTTRESEILQDADRLDAIGA CCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH IGIARTFQFAGSRGTPLDLSEDSAIQHFQDKLLKLASMMHTKEAKRLAHSRHVFMERFYN HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH QFHEEWDGMDT HHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]