BacMap

Definition	Exiguobacterium sp. AT1b, complete genome.
Accession	NC_012673
Length	2,999,895

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The map label for this gene is gapN [H]

Identifier: 229916201

GI number: 229916201

Start: 427977

End: 429413

Strand: Reverse

Name: gapN [H]

Synonym: EAT1b_0470

Alternate gene names: 229916201

Gene position: 429413-427977 (Counterclockwise)

Preceding gene: 229916203

Following gene: 229916200

Centisome position: 14.31

GC content: 50.03

Gene sequence:

>1437_bases
ATGATGAGTATGAACACATATCCATATTTATTGAATGGTCAATGGCAGGAATCTTCAAGCAATGAAACGATTGAACTCGT
TTCACCATATAAAGACGAAGTCGTAGGTCGCGTTCAAGCGATGTCACGCGATGAAGTCGATGAAGCCATCCATGGCGCAA
AACGTGCACAACAAGAATGGGCGGCGCTTCCGGTCAACAAGCGCGCTGAATTGTTGTACGCATGGGCAGAAAAACTCGAA
GAACGCGTGGATGAGATTGGTCAAATCATCATGCAAGAAGTCGGGAAAAACTTGAACGACGCGAAGAAGGAAGTCGTGCG
TACGGCGGAAATCATTCGTTATACGGCAGAAGAAGGGATTCGCTTCAATGGCGGCTTCATGCAAGGCGATTCATTCCCAG
GTGGCTCGAAAAACAAGATGGCCATCATCAAGAAAGAAGCGCTTGGTGTCGTCCTCGCGATTTCACCATTTAACTACCCG
GTAAACTTAGCAGCTGCTAAAATTGCGCCGGCGCTCGTCACAGGAAATGCGGTCGTTTTCAAACCAGCGACGCAAGGTGC
GATCAGCGGGATCAAGATGGTCGAGGCCCTTCATGATGCAGGTCTTCCAAAAGGCCTCTTGAACCTCGTGACAGGTCGCG
GTTCGGTCATCGGTGACTACTTGACTTCGCACCCAGGGATCGACATGATCACCTTCACAGGTGGAACGGGTACGGGTCAA
CACTTGTCACAACAAGCGTCAATGGTGCCGGTCGTACTCGAACTCGGTGGAAAAGACCCGGCCCTCGTCTTAGAGGATGC
GGACTTGACGTTAGCTGCTGATCAAATTGTCAGCGGAGCGTTCTCATATTCAGGTCAACGTTGTACAGCAATCAAGCGTG
TCTTCGTCCTTGAAGATCAAGCGGATGAGCTCGTCGATATGTTGAAAGAACGTGTCGCGAAACTTTCAGTCGGTTCACCG
GAAGAGAACAGCTTCATCGTTCCTTTAGTTGATGCGAAGACGACGGATTACGTACAAGGACTGATTGACGACGCCGTCAC
TAAAAAAGCAACGGTCGTTTACGGCAATAAGCGTGAAGGAAACTTGCTTCACCCGACATTGCTTGATCACGTGACGACAG
ATATGCGTGTCGCATGGGAAGAACCGTTTGGACCGGTCCTCCCGGTCATCCGTGTAAAATCACTCGACGAGATGATCGCA
CTCACGAATGAATCGGAGTTCGGTCTTCAGGCGAGCGTCTTCACACAAAACGTCAATAGCGCCTTCACAGTCGCTGACAA
GTTAGAAGTCGGAACGGTTCAAGTGAACGGACGAACAGAACGCGGACCAGACCACTTCCCATTCATCGGTGTGAAACAAT
CAGGACTCGGTGTTCAAGGAATCGGACGTAGCCTCGAGACGATGACACGTGATAAAGTAACGGTCATCAACCTATAA

Upstream 100 bases:

>100_bases
ATCTCATAAACTGAATCGTTATAGTTGTCCAATGGAAAAAAATCTGCATACAATGGGGTTGGCAACGAGATATTACAGCT
TACTCAGGAGGCAGATAGAG

Downstream 100 bases:

>100_bases
TACGAATCATTCATGAGGGAGAGACATCTCCCTCTTTTTTGTTTGATTGAAAACGCATCTTTCAGACGGGTATAATGGAG
AAAGACAGGAAGAAGGGGTG

Product: Aldehyde Dehydrogenase

Products: NA

Alternate protein names: Glyceraldehyde-3-phosphate dehydrogenase [NADP+]; GAPN; Non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase; Triosephosphate dehydrogenase [H]

Number of amino acids: Translated: 478; Mature: 478

Protein sequence:

>478_residues
MMSMNTYPYLLNGQWQESSSNETIELVSPYKDEVVGRVQAMSRDEVDEAIHGAKRAQQEWAALPVNKRAELLYAWAEKLE
ERVDEIGQIIMQEVGKNLNDAKKEVVRTAEIIRYTAEEGIRFNGGFMQGDSFPGGSKNKMAIIKKEALGVVLAISPFNYP
VNLAAAKIAPALVTGNAVVFKPATQGAISGIKMVEALHDAGLPKGLLNLVTGRGSVIGDYLTSHPGIDMITFTGGTGTGQ
HLSQQASMVPVVLELGGKDPALVLEDADLTLAADQIVSGAFSYSGQRCTAIKRVFVLEDQADELVDMLKERVAKLSVGSP
EENSFIVPLVDAKTTDYVQGLIDDAVTKKATVVYGNKREGNLLHPTLLDHVTTDMRVAWEEPFGPVLPVIRVKSLDEMIA
LTNESEFGLQASVFTQNVNSAFTVADKLEVGTVQVNGRTERGPDHFPFIGVKQSGLGVQGIGRSLETMTRDKVTVINL

Sequences:

>Translated_478_residues
MMSMNTYPYLLNGQWQESSSNETIELVSPYKDEVVGRVQAMSRDEVDEAIHGAKRAQQEWAALPVNKRAELLYAWAEKLE
ERVDEIGQIIMQEVGKNLNDAKKEVVRTAEIIRYTAEEGIRFNGGFMQGDSFPGGSKNKMAIIKKEALGVVLAISPFNYP
VNLAAAKIAPALVTGNAVVFKPATQGAISGIKMVEALHDAGLPKGLLNLVTGRGSVIGDYLTSHPGIDMITFTGGTGTGQ
HLSQQASMVPVVLELGGKDPALVLEDADLTLAADQIVSGAFSYSGQRCTAIKRVFVLEDQADELVDMLKERVAKLSVGSP
EENSFIVPLVDAKTTDYVQGLIDDAVTKKATVVYGNKREGNLLHPTLLDHVTTDMRVAWEEPFGPVLPVIRVKSLDEMIA
LTNESEFGLQASVFTQNVNSAFTVADKLEVGTVQVNGRTERGPDHFPFIGVKQSGLGVQGIGRSLETMTRDKVTVINL
>Mature_478_residues
MMSMNTYPYLLNGQWQESSSNETIELVSPYKDEVVGRVQAMSRDEVDEAIHGAKRAQQEWAALPVNKRAELLYAWAEKLE
ERVDEIGQIIMQEVGKNLNDAKKEVVRTAEIIRYTAEEGIRFNGGFMQGDSFPGGSKNKMAIIKKEALGVVLAISPFNYP
VNLAAAKIAPALVTGNAVVFKPATQGAISGIKMVEALHDAGLPKGLLNLVTGRGSVIGDYLTSHPGIDMITFTGGTGTGQ
HLSQQASMVPVVLELGGKDPALVLEDADLTLAADQIVSGAFSYSGQRCTAIKRVFVLEDQADELVDMLKERVAKLSVGSP
EENSFIVPLVDAKTTDYVQGLIDDAVTKKATVVYGNKREGNLLHPTLLDHVTTDMRVAWEEPFGPVLPVIRVKSLDEMIA
LTNESEFGLQASVFTQNVNSAFTVADKLEVGTVQVNGRTERGPDHFPFIGVKQSGLGVQGIGRSLETMTRDKVTVINL

Specific function: Catalyzes the irreversible NADP-dependent oxidation of glyceraldehyde-3-phosphate to 3-phosphoglycerate. Is not able to use NAD instead of NADP. May play an important role in NADPH production in S.equinus [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aldehyde dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI25777724, Length=464, Percent_Identity=35.1293103448276, Blast_Score=246, Evalue=3e-65,
Organism=Homo sapiens, GI153266822, Length=483, Percent_Identity=33.7474120082816, Blast_Score=244, Evalue=1e-64,
Organism=Homo sapiens, GI21361176, Length=459, Percent_Identity=32.8976034858388, Blast_Score=234, Evalue=1e-61,
Organism=Homo sapiens, GI25777730, Length=486, Percent_Identity=31.8930041152263, Blast_Score=231, Evalue=2e-60,
Organism=Homo sapiens, GI25777728, Length=325, Percent_Identity=40.3076923076923, Blast_Score=226, Evalue=4e-59,
Organism=Homo sapiens, GI115387104, Length=462, Percent_Identity=29.6536796536797, Blast_Score=219, Evalue=5e-57,
Organism=Homo sapiens, GI238814322, Length=474, Percent_Identity=31.6455696202532, Blast_Score=213, Evalue=3e-55,
Organism=Homo sapiens, GI25777732, Length=488, Percent_Identity=29.9180327868852, Blast_Score=212, Evalue=7e-55,
Organism=Homo sapiens, GI21614513, Length=474, Percent_Identity=31.2236286919831, Blast_Score=210, Evalue=3e-54,
Organism=Homo sapiens, GI12007648, Length=481, Percent_Identity=29.1060291060291, Blast_Score=207, Evalue=1e-53,
Organism=Homo sapiens, GI11095441, Length=462, Percent_Identity=29.004329004329, Blast_Score=207, Evalue=3e-53,
Organism=Homo sapiens, GI4507229, Length=416, Percent_Identity=34.6153846153846, Blast_Score=204, Evalue=2e-52,
Organism=Homo sapiens, GI25777726, Length=461, Percent_Identity=31.8872017353579, Blast_Score=197, Evalue=2e-50,
Organism=Homo sapiens, GI25777721, Length=429, Percent_Identity=33.5664335664336, Blast_Score=195, Evalue=9e-50,
Organism=Homo sapiens, GI188035924, Length=481, Percent_Identity=29.3139293139293, Blast_Score=194, Evalue=2e-49,
Organism=Homo sapiens, GI310128103, Length=461, Percent_Identity=29.9349240780911, Blast_Score=191, Evalue=9e-49,
Organism=Homo sapiens, GI310128093, Length=461, Percent_Identity=29.9349240780911, Blast_Score=191, Evalue=1e-48,
Organism=Homo sapiens, GI25952152, Length=470, Percent_Identity=28.5106382978723, Blast_Score=177, Evalue=2e-44,
Organism=Homo sapiens, GI310128091, Length=461, Percent_Identity=28.6334056399132, Blast_Score=164, Evalue=1e-40,
Organism=Homo sapiens, GI206597441, Length=438, Percent_Identity=27.8538812785388, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI206597439, Length=438, Percent_Identity=27.8538812785388, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI22907049, Length=438, Percent_Identity=27.8538812785388, Blast_Score=136, Evalue=4e-32,
Organism=Homo sapiens, GI238859541, Length=416, Percent_Identity=28.3653846153846, Blast_Score=135, Evalue=6e-32,
Organism=Homo sapiens, GI25777736, Length=416, Percent_Identity=28.3653846153846, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI25777734, Length=416, Percent_Identity=28.3653846153846, Blast_Score=135, Evalue=7e-32,
Organism=Homo sapiens, GI310128089, Length=273, Percent_Identity=32.6007326007326, Blast_Score=134, Evalue=2e-31,
Organism=Homo sapiens, GI310128087, Length=457, Percent_Identity=25.601750547046, Blast_Score=130, Evalue=3e-30,
Organism=Homo sapiens, GI301500698, Length=282, Percent_Identity=30.1418439716312, Blast_Score=127, Evalue=2e-29,
Organism=Homo sapiens, GI310128097, Length=239, Percent_Identity=33.4728033472803, Blast_Score=124, Evalue=1e-28,
Organism=Homo sapiens, GI4557303, Length=341, Percent_Identity=27.8592375366569, Blast_Score=124, Evalue=2e-28,
Organism=Homo sapiens, GI73466520, Length=341, Percent_Identity=27.8592375366569, Blast_Score=124, Evalue=3e-28,
Organism=Homo sapiens, GI4502043, Length=442, Percent_Identity=25.3393665158371, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI238814371, Length=442, Percent_Identity=25.3393665158371, Blast_Score=119, Evalue=5e-27,
Organism=Homo sapiens, GI71773324, Length=343, Percent_Identity=28.2798833819242, Blast_Score=118, Evalue=1e-26,
Organism=Homo sapiens, GI310128095, Length=298, Percent_Identity=29.5302013422819, Blast_Score=118, Evalue=2e-26,
Organism=Homo sapiens, GI73695881, Length=354, Percent_Identity=28.2485875706215, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI73695879, Length=354, Percent_Identity=28.2485875706215, Blast_Score=116, Evalue=5e-26,
Organism=Homo sapiens, GI223972651, Length=461, Percent_Identity=24.5119305856833, Blast_Score=94, Evalue=2e-19,
Organism=Homo sapiens, GI310128101, Length=238, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI310128099, Length=238, Percent_Identity=26.4705882352941, Blast_Score=85, Evalue=2e-16,
Organism=Escherichia coli, GI1789015, Length=475, Percent_Identity=35.7894736842105, Blast_Score=293, Evalue=2e-80,
Organism=Escherichia coli, GI1787684, Length=458, Percent_Identity=36.0262008733624, Blast_Score=274, Evalue=9e-75,
Organism=Escherichia coli, GI87081896, Length=459, Percent_Identity=34.2047930283224, Blast_Score=247, Evalue=1e-66,
Organism=Escherichia coli, GI1786504, Length=489, Percent_Identity=32.5153374233129, Blast_Score=229, Evalue=3e-61,
Organism=Escherichia coli, GI1787558, Length=478, Percent_Identity=31.7991631799163, Blast_Score=221, Evalue=7e-59,
Organism=Escherichia coli, GI1787715, Length=479, Percent_Identity=31.3152400835073, Blast_Score=206, Evalue=2e-54,
Organism=Escherichia coli, GI87082295, Length=489, Percent_Identity=30.4703476482618, Blast_Score=204, Evalue=1e-53,
Organism=Escherichia coli, GI87081926, Length=438, Percent_Identity=29.9086757990868, Blast_Score=186, Evalue=2e-48,
Organism=Escherichia coli, GI1787250, Length=448, Percent_Identity=28.3482142857143, Blast_Score=156, Evalue=2e-39,
Organism=Escherichia coli, GI1788042, Length=463, Percent_Identity=27.645788336933, Blast_Score=150, Evalue=2e-37,
Organism=Escherichia coli, GI1787653, Length=255, Percent_Identity=30.5882352941176, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1788797, Length=340, Percent_Identity=25.5882352941176, Blast_Score=69, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17562198, Length=468, Percent_Identity=32.0512820512821, Blast_Score=226, Evalue=2e-59,
Organism=Caenorhabditis elegans, GI25143874, Length=480, Percent_Identity=29.5833333333333, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI25143876, Length=480, Percent_Identity=29.5833333333333, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI17534119, Length=471, Percent_Identity=31.2101910828025, Blast_Score=216, Evalue=2e-56,
Organism=Caenorhabditis elegans, GI133930964, Length=468, Percent_Identity=31.8376068376068, Blast_Score=215, Evalue=4e-56,
Organism=Caenorhabditis elegans, GI71995606, Length=487, Percent_Identity=29.5687885010267, Blast_Score=209, Evalue=3e-54,
Organism=Caenorhabditis elegans, GI115534176, Length=482, Percent_Identity=29.8755186721992, Blast_Score=199, Evalue=3e-51,
Organism=Caenorhabditis elegans, GI25144435, Length=492, Percent_Identity=29.6747967479675, Blast_Score=197, Evalue=7e-51,
Organism=Caenorhabditis elegans, GI71995613, Length=424, Percent_Identity=29.4811320754717, Blast_Score=185, Evalue=5e-47,
Organism=Caenorhabditis elegans, GI32564736, Length=346, Percent_Identity=33.8150289017341, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI71986308, Length=462, Percent_Identity=27.4891774891775, Blast_Score=181, Evalue=8e-46,
Organism=Caenorhabditis elegans, GI17551164, Length=444, Percent_Identity=28.1531531531532, Blast_Score=173, Evalue=2e-43,
Organism=Caenorhabditis elegans, GI17534447, Length=438, Percent_Identity=27.8538812785388, Blast_Score=135, Evalue=7e-32,
Organism=Caenorhabditis elegans, GI32564151, Length=405, Percent_Identity=27.9012345679012, Blast_Score=132, Evalue=5e-31,
Organism=Caenorhabditis elegans, GI17564084, Length=341, Percent_Identity=29.6187683284457, Blast_Score=128, Evalue=6e-30,
Organism=Caenorhabditis elegans, GI32566756, Length=339, Percent_Identity=30.3834808259587, Blast_Score=127, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI25146394, Length=339, Percent_Identity=30.3834808259587, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI25146391, Length=339, Percent_Identity=30.3834808259587, Blast_Score=126, Evalue=3e-29,
Organism=Caenorhabditis elegans, GI115532534, Length=370, Percent_Identity=27.5675675675676, Blast_Score=122, Evalue=4e-28,
Organism=Caenorhabditis elegans, GI71990744, Length=303, Percent_Identity=29.042904290429, Blast_Score=102, Evalue=4e-22,
Organism=Saccharomyces cerevisiae, GI6324950, Length=457, Percent_Identity=33.9168490153173, Blast_Score=259, Evalue=6e-70,
Organism=Saccharomyces cerevisiae, GI6320917, Length=470, Percent_Identity=32.5531914893617, Blast_Score=252, Evalue=9e-68,
Organism=Saccharomyces cerevisiae, GI6319478, Length=480, Percent_Identity=32.5, Blast_Score=232, Evalue=9e-62,
Organism=Saccharomyces cerevisiae, GI6323822, Length=486, Percent_Identity=31.8930041152263, Blast_Score=230, Evalue=3e-61,
Organism=Saccharomyces cerevisiae, GI6323821, Length=464, Percent_Identity=31.6810344827586, Blast_Score=225, Evalue=1e-59,
Organism=Saccharomyces cerevisiae, GI6325196, Length=459, Percent_Identity=31.1546840958606, Blast_Score=224, Evalue=2e-59,
Organism=Saccharomyces cerevisiae, GI6321828, Length=475, Percent_Identity=31.1578947368421, Blast_Score=201, Evalue=3e-52,
Organism=Saccharomyces cerevisiae, GI6321826, Length=440, Percent_Identity=26.1363636363636, Blast_Score=113, Evalue=5e-26,
Organism=Saccharomyces cerevisiae, GI6323757, Length=333, Percent_Identity=26.7267267267267, Blast_Score=92, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281362580, Length=462, Percent_Identity=33.1168831168831, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI62472918, Length=462, Percent_Identity=33.1168831168831, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI62472926, Length=462, Percent_Identity=33.1168831168831, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI62472936, Length=462, Percent_Identity=33.1168831168831, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI21356737, Length=462, Percent_Identity=33.1168831168831, Blast_Score=250, Evalue=1e-66,
Organism=Drosophila melanogaster, GI20129399, Length=483, Percent_Identity=32.2981366459627, Blast_Score=233, Evalue=2e-61,
Organism=Drosophila melanogaster, GI24650465, Length=474, Percent_Identity=32.0675105485232, Blast_Score=224, Evalue=1e-58,
Organism=Drosophila melanogaster, GI24585660, Length=462, Percent_Identity=29.6536796536797, Blast_Score=214, Evalue=1e-55,
Organism=Drosophila melanogaster, GI24638876, Length=481, Percent_Identity=26.1954261954262, Blast_Score=170, Evalue=2e-42,
Organism=Drosophila melanogaster, GI24638878, Length=481, Percent_Identity=26.1954261954262, Blast_Score=169, Evalue=3e-42,
Organism=Drosophila melanogaster, GI24666674, Length=466, Percent_Identity=27.0386266094421, Blast_Score=161, Evalue=1e-39,
Organism=Drosophila melanogaster, GI24668425, Length=445, Percent_Identity=26.0674157303371, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24668417, Length=445, Percent_Identity=26.0674157303371, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI24668413, Length=445, Percent_Identity=26.0674157303371, Blast_Score=124, Evalue=1e-28,
Organism=Drosophila melanogaster, GI281360299, Length=339, Percent_Identity=27.7286135693215, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281360297, Length=339, Percent_Identity=27.7286135693215, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281360295, Length=339, Percent_Identity=27.7286135693215, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24586250, Length=339, Percent_Identity=27.7286135693215, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281360301, Length=339, Percent_Identity=27.7286135693215, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI28571806, Length=456, Percent_Identity=25.8771929824561, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571798, Length=463, Percent_Identity=26.133909287257, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571796, Length=463, Percent_Identity=26.133909287257, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571794, Length=463, Percent_Identity=26.133909287257, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571802, Length=456, Percent_Identity=25.8771929824561, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI28571800, Length=456, Percent_Identity=25.8771929824561, Blast_Score=109, Evalue=5e-24,
Organism=Drosophila melanogaster, GI45552499, Length=339, Percent_Identity=27.7286135693215, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI281360303, Length=339, Percent_Identity=27.7286135693215, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI28574525, Length=422, Percent_Identity=24.6445497630332, Blast_Score=94, Evalue=2e-19,
Organism=Drosophila melanogaster, GI281360293, Length=169, Percent_Identity=30.7692307692308, Blast_Score=76, Evalue=5e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016161
- InterPro:   IPR016163
- InterPro:   IPR016160
- InterPro:   IPR016162
- InterPro:   IPR015590 [H]

Pfam domain/function: PF00171 Aldedh [H]

EC number: =1.2.1.9 [H]

Molecular weight: Translated: 51757; Mature: 51757

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: PS00687 ALDEHYDE_DEHYDR_GLU ; PS00070 ALDEHYDE_DEHYDR_CYS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSMNTYPYLLNGQWQESSSNETIELVSPYKDEVVGRVQAMSRDEVDEAIHGAKRAQQEW
CCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AALPVNKRAELLYAWAEKLEERVDEIGQIIMQEVGKNLNDAKKEVVRTAEIIRYTAEEGI
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCE
RFNGGFMQGDSFPGGSKNKMAIIKKEALGVVLAISPFNYPVNLAAAKIAPALVTGNAVVF
EECCCEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHCCEEEECCEEEE
KPATQGAISGIKMVEALHDAGLPKGLLNLVTGRGSVIGDYLTSHPGIDMITFTGGTGTGQ
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCH
HLSQQASMVPVVLELGGKDPALVLEDADLTLAADQIVSGAFSYSGQRCTAIKRVFVLEDQ
HHHHHHCCCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHEEEEEEEECCC
ADELVDMLKERVAKLSVGSPEENSFIVPLVDAKTTDYVQGLIDDAVTKKATVVYGNKREG
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCC
NLLHPTLLDHVTTDMRVAWEEPFGPVLPVIRVKSLDEMIALTNESEFGLQASVFTQNVNS
CCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
AFTVADKLEVGTVQVNGRTERGPDHFPFIGVKQSGLGVQGIGRSLETMTRDKVTVINL
EEEEEECEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHCCCCEEEEEC
>Mature Secondary Structure
MMSMNTYPYLLNGQWQESSSNETIELVSPYKDEVVGRVQAMSRDEVDEAIHGAKRAQQEW
CCCCCCCCEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
AALPVNKRAELLYAWAEKLEERVDEIGQIIMQEVGKNLNDAKKEVVRTAEIIRYTAEEGI
HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCE
RFNGGFMQGDSFPGGSKNKMAIIKKEALGVVLAISPFNYPVNLAAAKIAPALVTGNAVVF
EECCCEECCCCCCCCCCCCEEEEEECCCEEEEEEECCCCCCCHHHHHHCCEEEECCEEEE
KPATQGAISGIKMVEALHDAGLPKGLLNLVTGRGSVIGDYLTSHPGIDMITFTGGTGTGQ
CCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCHHHHHHCCCCCEEEEEECCCCCCH
HLSQQASMVPVVLELGGKDPALVLEDADLTLAADQIVSGAFSYSGQRCTAIKRVFVLEDQ
HHHHHHCCCEEEEEECCCCCEEEEECCCCEEEHHHHHHHHHHCCCCHHHEEEEEEEECCC
ADELVDMLKERVAKLSVGSPEENSFIVPLVDAKTTDYVQGLIDDAVTKKATVVYGNKREG
HHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCHHHHHHHHHHHHCCCEEEEECCCCCC
NLLHPTLLDHVTTDMRVAWEEPFGPVLPVIRVKSLDEMIALTNESEFGLQASVFTQNVNS
CCCCHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCC
AFTVADKLEVGTVQVNGRTERGPDHFPFIGVKQSGLGVQGIGRSLETMTRDKVTVINL
EEEEEECEEEEEEEECCCCCCCCCCCCEEEEECCCCCHHHHCCHHHHHCCCCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA