| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is yqjP [H]
Identifier: 229916200
GI number: 229916200
Start: 426894
End: 427868
Strand: Reverse
Name: yqjP [H]
Synonym: EAT1b_0469
Alternate gene names: 229916200
Gene position: 427868-426894 (Counterclockwise)
Preceding gene: 229916201
Following gene: 229916199
Centisome position: 14.26
GC content: 49.74
Gene sequence:
>975_bases GTGGCAGACTGGATTTCAAGCCAATTGGCAAGACTCGATATTCCGACACCGTTCGAAGTCGGGAACGTGAACGTATATAT CGTTGAACATATGAACCGCTTCTTCATGGTCGATTGTGGACCAGACACGGAAGAGGCGTGGATCTCGTTGAACCGTCAAC TTGAAGAACTTGAACTTTCATTGGCGGATATCGACTTTTTATTCTTGACGCATCATCATGCGGATCATGCCGGACAAGCA TGGCGTCTTCGCGACGCATCCATTCCTGTATACGGACATGAAAAGCTCGTTCGCTACTTAGAGCAAACCCCAAACTTTTT GAAGCGGGGCAACCACTTTTTACATGAATTGGCCGTCTCGTTCGGGGCACCGGCTCCACTCGTGGAAAAATTACCAGACT ATCGCGAAGCGCTTCGCTGGATTGGACCGACGACTGTCACGATGACGTTCGATGACGGGCAAGCGTTGACGTCGGATGGG GCGTGGCAGACAATCCATCTGCCTGGACATGCGAGTGACCAGCTCGGCTTGATTGGTCCCGGAGGAGTCTTGATTGCCGG AGACCACCTCATCGACAAGGTCGAACCAAACCCCCTCATCGAACAACCATACGATGACGAAGGGTTCGCCTCACCCGTCA TCCTCTATATCGATTCGCTTAAAAAATTACGTGGGATCGATTTAAAGCTCGTCGTCAGTGGACACGGTGAACCGATTCAC CATCCGAATGATTTAATCGAGAGTCGGATTCGCCAACGGTATGAGCGCAGTGAACAATTGCTTGCCGAATGGGAAGATGG ACTTAGCGTTTTTGATTGGTCAATGAAGTTATATGGAAGAAAGATGCGACGTGGGATGCCGCTCGTCTTCAGTGAAGTGT TTGCACGACTCAGTTTACTCGAGGAACGTGGCGACATCGAGAGACGTCGAGATGATCAAAAATGGATTTATACGAAGAAA GAAGTGATGTCGTGA
Upstream 100 bases:
>100_bases ATTCATGAGGGAGAGACATCTCCCTCTTTTTTGTTTGATTGAAAACGCATCTTTCAGACGGGTATAATGGAGAAAGACAG GAAGAAGGGGTGGTGATGAC
Downstream 100 bases:
>100_bases AACGGGTAGTCATTACTGGTGCGTCAAGCGGGCTCGGTGCCGCATTGGCGCATTCTTTTTATGAACATGGATACAACGTA TTATTGATTGGAAGAAATGA
Product: beta-lactamase domain protein
Products: substituted beta-amino acid
Alternate protein names: NA
Number of amino acids: Translated: 324; Mature: 323
Protein sequence:
>324_residues MADWISSQLARLDIPTPFEVGNVNVYIVEHMNRFFMVDCGPDTEEAWISLNRQLEELELSLADIDFLFLTHHHADHAGQA WRLRDASIPVYGHEKLVRYLEQTPNFLKRGNHFLHELAVSFGAPAPLVEKLPDYREALRWIGPTTVTMTFDDGQALTSDG AWQTIHLPGHASDQLGLIGPGGVLIAGDHLIDKVEPNPLIEQPYDDEGFASPVILYIDSLKKLRGIDLKLVVSGHGEPIH HPNDLIESRIRQRYERSEQLLAEWEDGLSVFDWSMKLYGRKMRRGMPLVFSEVFARLSLLEERGDIERRRDDQKWIYTKK EVMS
Sequences:
>Translated_324_residues MADWISSQLARLDIPTPFEVGNVNVYIVEHMNRFFMVDCGPDTEEAWISLNRQLEELELSLADIDFLFLTHHHADHAGQA WRLRDASIPVYGHEKLVRYLEQTPNFLKRGNHFLHELAVSFGAPAPLVEKLPDYREALRWIGPTTVTMTFDDGQALTSDG AWQTIHLPGHASDQLGLIGPGGVLIAGDHLIDKVEPNPLIEQPYDDEGFASPVILYIDSLKKLRGIDLKLVVSGHGEPIH HPNDLIESRIRQRYERSEQLLAEWEDGLSVFDWSMKLYGRKMRRGMPLVFSEVFARLSLLEERGDIERRRDDQKWIYTKK EVMS >Mature_323_residues ADWISSQLARLDIPTPFEVGNVNVYIVEHMNRFFMVDCGPDTEEAWISLNRQLEELELSLADIDFLFLTHHHADHAGQAW RLRDASIPVYGHEKLVRYLEQTPNFLKRGNHFLHELAVSFGAPAPLVEKLPDYREALRWIGPTTVTMTFDDGQALTSDGA WQTIHLPGHASDQLGLIGPGGVLIAGDHLIDKVEPNPLIEQPYDDEGFASPVILYIDSLKKLRGIDLKLVVSGHGEPIHH PNDLIESRIRQRYERSEQLLAEWEDGLSVFDWSMKLYGRKMRRGMPLVFSEVFARLSLLEERGDIERRRDDQKWIYTKKE VMS
Specific function: Unknown
COG id: COG0491
COG function: function code R; Zn-dependent hydrolases, including glyoxylases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: 3.5.2.6
Molecular weight: Translated: 37144; Mature: 37012
Theoretical pI: Translated: 5.14; Mature: 5.14
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADWISSQLARLDIPTPFEVGNVNVYIVEHMNRFFMVDCGPDTEEAWISLNRQLEELELS CCCHHHHHHHHCCCCCCCEECCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH LADIDFLFLTHHHADHAGQAWRLRDASIPVYGHEKLVRYLEQTPNFLKRGNHFLHELAVS HHHEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH FGAPAPLVEKLPDYREALRWIGPTTVTMTFDDGQALTSDGAWQTIHLPGHASDQLGLIGP HCCCCHHHHHCHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCCCCCCCCEEECC GGVLIAGDHLIDKVEPNPLIEQPYDDEGFASPVILYIDSLKKLRGIDLKLVVSGHGEPIH CCEEEECCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC HPNDLIESRIRQRYERSEQLLAEWEDGLSVFDWSMKLYGRKMRRGMPLVFSEVFARLSLL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EERGDIERRRDDQKWIYTKKEVMS HHHCCHHHHCCCCHHEECHHHHCC >Mature Secondary Structure ADWISSQLARLDIPTPFEVGNVNVYIVEHMNRFFMVDCGPDTEEAWISLNRQLEELELS CCHHHHHHHHCCCCCCCEECCEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHHHHHH LADIDFLFLTHHHADHAGQAWRLRDASIPVYGHEKLVRYLEQTPNFLKRGNHFLHELAVS HHHEEEEEEEECCCCCCCCEEEEECCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHH FGAPAPLVEKLPDYREALRWIGPTTVTMTFDDGQALTSDGAWQTIHLPGHASDQLGLIGP HCCCCHHHHHCHHHHHHHHHCCCEEEEEEECCCCEECCCCCEEEEECCCCCCCCCEEECC GGVLIAGDHLIDKVEPNPLIEQPYDDEGFASPVILYIDSLKKLRGIDLKLVVSGHGEPIH CCEEEECCHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCC HPNDLIESRIRQRYERSEQLLAEWEDGLSVFDWSMKLYGRKMRRGMPLVFSEVFARLSLL CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHCCCCHHHHHHHHHHHHH EERGDIERRRDDQKWIYTKKEVMS HHHCCHHHHCCCCHHEECHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: beta-lactam; H2O
Specific reaction: A beta-lactam + H2O = a substituted beta-amino acid
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]