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The map label for this gene is ymfF [H]

Identifier: 229916167

GI number: 229916167

Start: 398935

End: 400173

Strand: Reverse

Name: ymfF [H]

Synonym: EAT1b_0436

Alternate gene names: 229916167

Gene position: 400173-398935 (Counterclockwise)

Preceding gene: 229916168

Following gene: 229916166

Centisome position: 13.34

GC content: 49.15

Gene sequence:

>1239_bases
ATGAAAGGTATCGTTCAGTTCCAACATCAATTGCACTACTCGGTCTATCCGACCAAAAAATTTAAAACGACGACTTGTCT
CGTGTCATTCGCCGCTCCATTATCGGCGGAGACGGTCGCAGATCGGGCATTGCTCCCGTTCATTATGGAGAAATCGACGG
CAACGTATCCATCCATTGAGTTATTTCACACACCGCTAGAGGAGTTGTATGACACAAACTTATATGCTGGTGCATCTAAG
ATCGGAAAGGAGCACGTCATCCAATTCCAACTCGAAGTCGTCAACGATCATCTTGTCGGGGAAGACGTATTGAGTCAGGC
AATCGAGTTACTCGAAGACGTTCTCCTTCGTCCGAACGCATACGATGGGGCGTTCCAGCCACTCATCGTCGAGCAGGAAC
GTCGATTGCAACGTCAGCGTATCGAATCGGTCTATGATGACAAAATGCGTTTCGCCCAACAGCGTCTACAAGAAATGCTC
GGAGGAGAACTTGCGATTCCGTCACTCGGTACGCTTGAGCAACTCGACCATGTCACACCGAAATCATTGTATGAGGCATA
TCAATCGATGATTCAACATGACCGTGTGGACATCTATGTTGTCGGGGATGTCAATCGTGAGCAAGTCGAACAGGCTTTCA
ACCCATTGGAATCCCTTGGGACACGTCGACCACGCCTGTTACCGGAAGCGAGTCTAGGAGAGTTCAAGCGTTTGGAAGAA
CATCAAGACATTAAACAAAGCAAGCTCCATCTTGCCTATTCGCTTGATGTCGACCCACGAACGGAAGCGGCGATTCGCAT
GCAGGTCGTGAATGGACTGTTCGGTGGATTCCCTCACTCGAAGCTGTTCATGAACGTGCGTGAAAAGGAGAGCTTGGCGT
ACTATGCCGCCTCACAATATAGTTCCCTCAGTCGGAAGTTGTTCGTCTATGCCGGTATCGATGCGTCGAACCAGCAAAAG
ACCGAACAGATCATCGAAGAGCAATTGAACGCTTTACAAGCGGGCGAGTTTGAGGATGAAACGTTGCAACAGACGAAAGA
GTTGTTGTTCCATCAACGTCGTCAACTTGGAGACAGTCCACGTCAATTGATTGCTTGGATGAGTGGGGCAGACGTTCGTC
CGTTCTCGTTAGACGAAGAGATGGCGATCATTGAGAACACGACGCGAGATCATGTCGTCGCGCTTGCGAAAGAAATGGTA
CTCGAAGCGGTTTATTGCTTGAAAGGAGCAGAAGCATGA

Upstream 100 bases:

>100_bases
GTTGCCCGTTACGCGAACGTCGTGGCAGGGGTGCCGGATCAAGAATATGCGCGCGGCGCTGCAGTGTTTCAACCAAAACG
AAAAAAGGAGTGATCGGCAG

Downstream 100 bases:

>100_bases
AACTAGACTTTCCTAACGTCGGAGAGACGTTACATCATCACGTTCTCGACAATGGCCTCTCCGTTTACTTATTGAAAAAG
ACTGGATATGAAAAAACATT

Product: peptidase M16 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 412; Mature: 412

Protein sequence:

>412_residues
MKGIVQFQHQLHYSVYPTKKFKTTTCLVSFAAPLSAETVADRALLPFIMEKSTATYPSIELFHTPLEELYDTNLYAGASK
IGKEHVIQFQLEVVNDHLVGEDVLSQAIELLEDVLLRPNAYDGAFQPLIVEQERRLQRQRIESVYDDKMRFAQQRLQEML
GGELAIPSLGTLEQLDHVTPKSLYEAYQSMIQHDRVDIYVVGDVNREQVEQAFNPLESLGTRRPRLLPEASLGEFKRLEE
HQDIKQSKLHLAYSLDVDPRTEAAIRMQVVNGLFGGFPHSKLFMNVREKESLAYYAASQYSSLSRKLFVYAGIDASNQQK
TEQIIEEQLNALQAGEFEDETLQQTKELLFHQRRQLGDSPRQLIAWMSGADVRPFSLDEEMAIIENTTRDHVVALAKEMV
LEAVYCLKGAEA

Sequences:

>Translated_412_residues
MKGIVQFQHQLHYSVYPTKKFKTTTCLVSFAAPLSAETVADRALLPFIMEKSTATYPSIELFHTPLEELYDTNLYAGASK
IGKEHVIQFQLEVVNDHLVGEDVLSQAIELLEDVLLRPNAYDGAFQPLIVEQERRLQRQRIESVYDDKMRFAQQRLQEML
GGELAIPSLGTLEQLDHVTPKSLYEAYQSMIQHDRVDIYVVGDVNREQVEQAFNPLESLGTRRPRLLPEASLGEFKRLEE
HQDIKQSKLHLAYSLDVDPRTEAAIRMQVVNGLFGGFPHSKLFMNVREKESLAYYAASQYSSLSRKLFVYAGIDASNQQK
TEQIIEEQLNALQAGEFEDETLQQTKELLFHQRRQLGDSPRQLIAWMSGADVRPFSLDEEMAIIENTTRDHVVALAKEMV
LEAVYCLKGAEA
>Mature_412_residues
MKGIVQFQHQLHYSVYPTKKFKTTTCLVSFAAPLSAETVADRALLPFIMEKSTATYPSIELFHTPLEELYDTNLYAGASK
IGKEHVIQFQLEVVNDHLVGEDVLSQAIELLEDVLLRPNAYDGAFQPLIVEQERRLQRQRIESVYDDKMRFAQQRLQEML
GGELAIPSLGTLEQLDHVTPKSLYEAYQSMIQHDRVDIYVVGDVNREQVEQAFNPLESLGTRRPRLLPEASLGEFKRLEE
HQDIKQSKLHLAYSLDVDPRTEAAIRMQVVNGLFGGFPHSKLFMNVREKESLAYYAASQYSSLSRKLFVYAGIDASNQQK
TEQIIEEQLNALQAGEFEDETLQQTKELLFHQRRQLGDSPRQLIAWMSGADVRPFSLDEEMAIIENTTRDHVVALAKEMV
LEAVYCLKGAEA

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR007863 [H]

Pfam domain/function: PF05193 Peptidase_M16_C [H]

EC number: NA

Molecular weight: Translated: 46967; Mature: 46967

Theoretical pI: Translated: 4.91; Mature: 4.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIVQFQHQLHYSVYPTKKFKTTTCLVSFAAPLSAETVADRALLPFIMEKSTATYPSIE
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH
LFHTPLEELYDTNLYAGASKIGKEHVIQFQLEVVNDHLVGEDVLSQAIELLEDVLLRPNA
HHHCCHHHHHCCCHHHCHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
YDGAFQPLIVEQERRLQRQRIESVYDDKMRFAQQRLQEMLGGELAIPSLGTLEQLDHVTP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCH
KSLYEAYQSMIQHDRVDIYVVGDVNREQVEQAFNPLESLGTRRPRLLPEASLGEFKRLEE
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
HQDIKQSKLHLAYSLDVDPRTEAAIRMQVVNGLFGGFPHSKLFMNVREKESLAYYAASQY
HHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SSLSRKLFVYAGIDASNQQKTEQIIEEQLNALQAGEFEDETLQQTKELLFHQRRQLGDSP
HHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
RQLIAWMSGADVRPFSLDEEMAIIENTTRDHVVALAKEMVLEAVYCLKGAEA
HHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKGIVQFQHQLHYSVYPTKKFKTTTCLVSFAAPLSAETVADRALLPFIMEKSTATYPSIE
CCCHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCHH
LFHTPLEELYDTNLYAGASKIGKEHVIQFQLEVVNDHLVGEDVLSQAIELLEDVLLRPNA
HHHCCHHHHHCCCHHHCHHHHCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCC
YDGAFQPLIVEQERRLQRQRIESVYDDKMRFAQQRLQEMLGGELAIPSLGTLEQLDHVTP
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCH
KSLYEAYQSMIQHDRVDIYVVGDVNREQVEQAFNPLESLGTRRPRLLPEASLGEFKRLEE
HHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHH
HQDIKQSKLHLAYSLDVDPRTEAAIRMQVVNGLFGGFPHSKLFMNVREKESLAYYAASQY
HHHHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH
SSLSRKLFVYAGIDASNQQKTEQIIEEQLNALQAGEFEDETLQQTKELLFHQRRQLGDSP
HHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCH
RQLIAWMSGADVRPFSLDEEMAIIENTTRDHVVALAKEMVLEAVYCLKGAEA
HHHHHHHCCCCCCCCCCCCCHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]