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The map label for this gene is ymfH [H]

Identifier: 229916166

GI number: 229916166

Start: 397679

End: 398938

Strand: Reverse

Name: ymfH [H]

Synonym: EAT1b_0435

Alternate gene names: 229916166

Gene position: 398938-397679 (Counterclockwise)

Preceding gene: 229916167

Following gene: 229916165

Centisome position: 13.3

GC content: 47.54

Gene sequence:

>1260_bases
ATGAAACTAGACTTTCCTAACGTCGGAGAGACGTTACATCATCACGTTCTCGACAATGGCCTCTCCGTTTACTTATTGAA
AAAGACTGGATATGAAAAAACATTCGCGACGTTCACGACCAAATATGGATCGATTGACCGACGCTTTAAACTAGAAGACT
GGGTCGAGGTTCCCGATGGTATCGCGCATTTCTTAGAACATAAGATGTTCGAGAAAGAAGATGGTGACGTCTTCCAACAA
TTTGGTCGTCAAGGAGCGTCAGCGAACGCTTTCACGTCATTCACACGGACGGCTTATTTGTTCGGTGCCACGTCCAAGAT
CTCGGAAAACGTACAGACGCTGCTCGATTTCGTCCAGACCCCTTATTTCACGAAAGAGTCGGTCGAGAAAGAGAAAGGAA
TCATCGGTCAAGAAATTCAAATGTACCAAGACAATCCGGGGTGGCGTTTGTATTTTGGTTTAATTGAGGCGATGTACGAG
ACACATCCCGTCAAAATTGATATCGCAGGTACGATCGAATCGATTTCAAAGATCACGGCGGAAGACTTGTACACCTGTCA
TCAAGCGTTCTATCATCCGAGCAACATGGCATTGTTCGTCGTCGGGAATATCGAACCGGATGAGATGCTTGCCTTGATTC
GAGATAATCAAGCAGCTAAATCTTTTGAAACGCCACGATTGAGTGCTCGCGAGACAGTAGATGAGCCGACCACGGTTCGT
CTGTCAGAACGGGTCATCGAGATGGACGTCTCTGTACCGAAAGTCATGATTGGGTATAAGGACATACCGCAAGCTGGGGA
AGCGGGTCTGAAGCAAGAATTGACAGTAGAACTGCTCATGCATGCGCTCTTCGACACGACAGCACCTCTTTATACAGAAC
TTTATGCTGAAGGATTGATTGACGATGCCTTCTCGTTTGACTATACGTCAGAGGAGACGTTCGCTTTTGCCGCCTTGTCG
ATGGAGACGTCGGAAGTGGATGCGTTTGTCAGCCGTGTGACGGAGGCGTTAGAACGTCCACTTCAGTTGAGTCAAGAGAC
GCTCGACCGGAAGAAACGCATGATGCAAGGACAGTTCTTGAAAGCATTGAACTCACCTGAGTTCATCGCCAATCAGTTCT
CCCGTTATGCGCTCAATGATGGGAACTTGTTTGAAATCCCGACTTTGATTGATGCCATCACGCTCGATGAACTATACGAA
GCATACGAGCGCTTGTTCCGCCGTGAACAACGAACGGTGTGCGTCGTCAAAAAACCATGA

Upstream 100 bases:

>100_bases
AAGAGATGGCGATCATTGAGAACACGACGCGAGATCATGTCGTCGCGCTTGCGAAAGAAATGGTACTCGAAGCGGTTTAT
TGCTTGAAAGGAGCAGAAGC

Downstream 100 bases:

>100_bases
AGACATTGATTGTTGGAGCGAGCGGTGCCATCGGACGTGCCGTCTCGCTCGCTTTTCGTGAAGATGAACTAATTTTGCAT
GCGAACGATGGTCGTGAAAG

Product: peptidase M16 domain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 419; Mature: 419

Protein sequence:

>419_residues
MKLDFPNVGETLHHHVLDNGLSVYLLKKTGYEKTFATFTTKYGSIDRRFKLEDWVEVPDGIAHFLEHKMFEKEDGDVFQQ
FGRQGASANAFTSFTRTAYLFGATSKISENVQTLLDFVQTPYFTKESVEKEKGIIGQEIQMYQDNPGWRLYFGLIEAMYE
THPVKIDIAGTIESISKITAEDLYTCHQAFYHPSNMALFVVGNIEPDEMLALIRDNQAAKSFETPRLSARETVDEPTTVR
LSERVIEMDVSVPKVMIGYKDIPQAGEAGLKQELTVELLMHALFDTTAPLYTELYAEGLIDDAFSFDYTSEETFAFAALS
METSEVDAFVSRVTEALERPLQLSQETLDRKKRMMQGQFLKALNSPEFIANQFSRYALNDGNLFEIPTLIDAITLDELYE
AYERLFRREQRTVCVVKKP

Sequences:

>Translated_419_residues
MKLDFPNVGETLHHHVLDNGLSVYLLKKTGYEKTFATFTTKYGSIDRRFKLEDWVEVPDGIAHFLEHKMFEKEDGDVFQQ
FGRQGASANAFTSFTRTAYLFGATSKISENVQTLLDFVQTPYFTKESVEKEKGIIGQEIQMYQDNPGWRLYFGLIEAMYE
THPVKIDIAGTIESISKITAEDLYTCHQAFYHPSNMALFVVGNIEPDEMLALIRDNQAAKSFETPRLSARETVDEPTTVR
LSERVIEMDVSVPKVMIGYKDIPQAGEAGLKQELTVELLMHALFDTTAPLYTELYAEGLIDDAFSFDYTSEETFAFAALS
METSEVDAFVSRVTEALERPLQLSQETLDRKKRMMQGQFLKALNSPEFIANQFSRYALNDGNLFEIPTLIDAITLDELYE
AYERLFRREQRTVCVVKKP
>Mature_419_residues
MKLDFPNVGETLHHHVLDNGLSVYLLKKTGYEKTFATFTTKYGSIDRRFKLEDWVEVPDGIAHFLEHKMFEKEDGDVFQQ
FGRQGASANAFTSFTRTAYLFGATSKISENVQTLLDFVQTPYFTKESVEKEKGIIGQEIQMYQDNPGWRLYFGLIEAMYE
THPVKIDIAGTIESISKITAEDLYTCHQAFYHPSNMALFVVGNIEPDEMLALIRDNQAAKSFETPRLSARETVDEPTTVR
LSERVIEMDVSVPKVMIGYKDIPQAGEAGLKQELTVELLMHALFDTTAPLYTELYAEGLIDDAFSFDYTSEETFAFAALS
METSEVDAFVSRVTEALERPLQLSQETLDRKKRMMQGQFLKALNSPEFIANQFSRYALNDGNLFEIPTLIDAITLDELYE
AYERLFRREQRTVCVVKKP

Specific function: Unknown

COG id: COG0612

COG function: function code R; Predicted Zn-dependent peptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M16 family [H]

Homologues:

Organism=Homo sapiens, GI94538354, Length=373, Percent_Identity=22.2520107238606, Blast_Score=66, Evalue=5e-11,
Organism=Escherichia coli, GI1787770, Length=170, Percent_Identity=30, Blast_Score=81, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI71999683, Length=424, Percent_Identity=23.3490566037736, Blast_Score=69, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6323421, Length=231, Percent_Identity=27.7056277056277, Blast_Score=66, Evalue=1e-11,
Organism=Drosophila melanogaster, GI21357875, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=9e-12,
Organism=Drosophila melanogaster, GI24646943, Length=201, Percent_Identity=27.8606965174129, Blast_Score=69, Evalue=9e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011249
- InterPro:   IPR011237
- InterPro:   IPR011765
- InterPro:   IPR007863 [H]

Pfam domain/function: PF00675 Peptidase_M16; PF05193 Peptidase_M16_C [H]

EC number: 3.4.99.- [C]

Molecular weight: Translated: 47836; Mature: 47836

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDFPNVGETLHHHVLDNGLSVYLLKKTGYEKTFATFTTKYGSIDRRFKLEDWVEVPDG
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHH
IAHFLEHKMFEKEDGDVFQQFGRQGASANAFTSFTRTAYLFGATSKISENVQTLLDFVQT
HHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC
PYFTKESVEKEKGIIGQEIQMYQDNPGWRLYFGLIEAMYETHPVKIDIAGTIESISKITA
CCCCHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
EDLYTCHQAFYHPSNMALFVVGNIEPDEMLALIRDNQAAKSFETPRLSARETVDEPTTVR
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCCCEEH
LSERVIEMDVSVPKVMIGYKDIPQAGEAGLKQELTVELLMHALFDTTAPLYTELYAEGLI
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DDAFSFDYTSEETFAFAALSMETSEVDAFVSRVTEALERPLQLSQETLDRKKRMMQGQFL
HHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALNSPEFIANQFSRYALNDGNLFEIPTLIDAITLDELYEAYERLFRREQRTVCVVKKP
HHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MKLDFPNVGETLHHHVLDNGLSVYLLKKTGYEKTFATFTTKYGSIDRRFKLEDWVEVPDG
CCCCCCCHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHCCCCCCCCCCHHHHCCCHH
IAHFLEHKMFEKEDGDVFQQFGRQGASANAFTSFTRTAYLFGATSKISENVQTLLDFVQT
HHHHHHHHHHCCCCCHHHHHHCCCCCCCCHHHHHHHHHHEECCHHHHHHHHHHHHHHHHC
PYFTKESVEKEKGIIGQEIQMYQDNPGWRLYFGLIEAMYETHPVKIDIAGTIESISKITA
CCCCHHHHHHHHCCCCCHHEEEECCCCCCHHHHHHHHHHCCCCEEEEECCHHHHHHHHHH
EDLYTCHQAFYHPSNMALFVVGNIEPDEMLALIRDNQAAKSFETPRLSARETVDEPTTVR
HHHHHHHHHHCCCCCEEEEEEECCCHHHHHHHHHCCHHHHCCCCCCCCHHHCCCCCCEEH
LSERVIEMDVSVPKVMIGYKDIPQAGEAGLKQELTVELLMHALFDTTAPLYTELYAEGLI
HHHHHHHHCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHH
DDAFSFDYTSEETFAFAALSMETSEVDAFVSRVTEALERPLQLSQETLDRKKRMMQGQFL
HHHCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KALNSPEFIANQFSRYALNDGNLFEIPTLIDAITLDELYEAYERLFRREQRTVCVVKKP
HHCCCHHHHHHHHHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Zn [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]