| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916039
Identifier: 229916039
GI number: 229916039
Start: 274555
End: 275352
Strand: Reverse
Name: 229916039
Synonym: EAT1b_0307
Alternate gene names: NA
Gene position: 275352-274555 (Counterclockwise)
Preceding gene: 229916040
Following gene: 229916038
Centisome position: 9.18
GC content: 51.75
Gene sequence:
>798_bases ATGAAGAAGTTGATGTCTTTACTGGGTACTCTAGCACTGGCTTTCGCTTTCGTCTTACCGGTTAGCGCGGATGGACATGA AAACGCGATGGTCCGTGTGCTACATGCTTCACCTGATGCACCGGCAGTTGACGTGTACGTGGATGGGGAAGTCGCGGTCG AGGGAGCAGAATTCAAGGATCTCACAGACTACTTGACACTTCCTGCAGGGGATTACAACGTTGAAATCAAGCCGGCAGGT GACGCTGAAACAGTCGTCGTCGCAGCAGACCTTTCAATCGAGGCAGGCAAGTTCTATACAGCCGCTGCAATCGGTCAACT TGAAAACATCGAAATCGCTGCAATGGAAGACGATGCAAACTTTGAAGATGGTAAATCGAAAGTTCGTGTCGCTCACTTCG CACCAGATGCACCAGCGGTCGATGTCGCACCTAAAGGTGGCGACCCACTCTTCTCAAACCTCGAGTTCAAAGCAGTAAGT GATTACGGCACACTCGATGCTGGAACGTATGACCTTGAAGTCCGTCCGGCTGGAGCGACTGACGTCGTCAAAGCACTTGA CGGTGTCGCACTCGAAGGTGGCAAAAACTATACAGCATTCGCAATCGGACTCCTTGAAGGAGAACCAGCGTTTGAAGTCC TTCTCGCCGCTGATGGTGGGGAAATGGCAATGGCTCCTGAAACAGGACAAGGTGGTCTTGCTCAAACAGCTTCAATGAAC TGGTTGCTCGCGGCAGCAGTAGTTGGAGCGGCAGCAGCTGGATTCTACGTCTTTCGTCGTCAGAAGCAAGACGCTTAA
Upstream 100 bases:
>100_bases GAGCTACATAGCAATCAGATGTAGCACACCATGTAGCACTGCATCACATTTGTTGTATGCACGTCGTGGGTTACCAAAGA TCAAAAGGAGGAAATTTCAC
Downstream 100 bases:
>100_bases ACTGATTTTCTTAGGAACGATCACATTTCTCGTATGGGGCGCTCAAGCGGAAGCTCCTGACAAACCGTTCGTCATGCCAA CGGCTGAATTTGCCGAACCG
Product: LPXTG-motif cell wall anchor domain protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 265; Mature: 265
Protein sequence:
>265_residues MKKLMSLLGTLALAFAFVLPVSADGHENAMVRVLHASPDAPAVDVYVDGEVAVEGAEFKDLTDYLTLPAGDYNVEIKPAG DAETVVVAADLSIEAGKFYTAAAIGQLENIEIAAMEDDANFEDGKSKVRVAHFAPDAPAVDVAPKGGDPLFSNLEFKAVS DYGTLDAGTYDLEVRPAGATDVVKALDGVALEGGKNYTAFAIGLLEGEPAFEVLLAADGGEMAMAPETGQGGLAQTASMN WLLAAAVVGAAAAGFYVFRRQKQDA
Sequences:
>Translated_265_residues MKKLMSLLGTLALAFAFVLPVSADGHENAMVRVLHASPDAPAVDVYVDGEVAVEGAEFKDLTDYLTLPAGDYNVEIKPAG DAETVVVAADLSIEAGKFYTAAAIGQLENIEIAAMEDDANFEDGKSKVRVAHFAPDAPAVDVAPKGGDPLFSNLEFKAVS DYGTLDAGTYDLEVRPAGATDVVKALDGVALEGGKNYTAFAIGLLEGEPAFEVLLAADGGEMAMAPETGQGGLAQTASMN WLLAAAVVGAAAAGFYVFRRQKQDA >Mature_265_residues MKKLMSLLGTLALAFAFVLPVSADGHENAMVRVLHASPDAPAVDVYVDGEVAVEGAEFKDLTDYLTLPAGDYNVEIKPAG DAETVVVAADLSIEAGKFYTAAAIGQLENIEIAAMEDDANFEDGKSKVRVAHFAPDAPAVDVAPKGGDPLFSNLEFKAVS DYGTLDAGTYDLEVRPAGATDVVKALDGVALEGGKNYTAFAIGLLEGEPAFEVLLAADGGEMAMAPETGQGGLAQTASMN WLLAAAVVGAAAAGFYVFRRQKQDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27446; Mature: 27446
Theoretical pI: Translated: 3.98; Mature: 3.98
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLMSLLGTLALAFAFVLPVSADGHENAMVRVLHASPDAPAVDVYVDGEVAVEGAEFKD CHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCCC LTDYLTLPAGDYNVEIKPAGDAETVVVAADLSIEAGKFYTAAAIGQLENIEIAAMEDDAN CHHHEECCCCCEEEEEEECCCCCEEEEEEECEEECCCEEEEHHHCCCCCEEEEEEECCCC FEDGKSKVRVAHFAPDAPAVDVAPKGGDPLFSNLEFKAVSDYGTLDAGTYDLEVRPAGAT CCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHH DVVKALDGVALEGGKNYTAFAIGLLEGEPAFEVLLAADGGEMAMAPETGQGGLAQTASMN HHHHHHCCEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCCCEECCCCH WLLAAAVVGAAAAGFYVFRRQKQDA HHHHHHHHHHHHHHHHEEEECCCCC >Mature Secondary Structure MKKLMSLLGTLALAFAFVLPVSADGHENAMVRVLHASPDAPAVDVYVDGEVAVEGAEFKD CHHHHHHHHHHHHHHHHHEECCCCCCCCEEEEEEECCCCCCEEEEEECCEEEEECCCCCC LTDYLTLPAGDYNVEIKPAGDAETVVVAADLSIEAGKFYTAAAIGQLENIEIAAMEDDAN CHHHEECCCCCEEEEEEECCCCCEEEEEEECEEECCCEEEEHHHCCCCCEEEEEEECCCC FEDGKSKVRVAHFAPDAPAVDVAPKGGDPLFSNLEFKAVSDYGTLDAGTYDLEVRPAGAT CCCCCCEEEEEEECCCCCEEEECCCCCCCCCCCEEEEEECCCCCCCCCEEEEEEECCCHH DVVKALDGVALEGGKNYTAFAIGLLEGEPAFEVLLAADGGEMAMAPETGQGGLAQTASMN HHHHHHCCEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCEEECCCCCCCCCEECCCCH WLLAAAVVGAAAAGFYVFRRQKQDA HHHHHHHHHHHHHHHHEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA