| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229916038
Identifier: 229916038
GI number: 229916038
Start: 273966
End: 274481
Strand: Reverse
Name: 229916038
Synonym: EAT1b_0306
Alternate gene names: NA
Gene position: 274481-273966 (Counterclockwise)
Preceding gene: 229916039
Following gene: 229916035
Centisome position: 9.15
GC content: 50.19
Gene sequence:
>516_bases ATGCCAACGGCTGAATTTGCCGAACCGCAGGTCTTGACCTCTAAGCAGGTCGATCGACAAACGTTTCATTCGAACAGTTT CGTCCCTGCCCGGCTGGTCATACCTTCAATCGATGTTGATACATCCATTGAAGCGGTCGGCAAGGATGAGGCTGGAAGAA TGGCTACACCTTCTGACGTGAATCATGTCGGTTGGTATCAATATGGAGCCAAAGCAGGCGCAACGGGGAATGTCGTCCTA TCAGGTCATCTCGATGATCTGAATGGTCCAGCTATTTTTGCGAATCTGGATCAACTTCCAATCGGAGAACTGGTGACGCT CCAACGGAAAGACCAGGTCGCTACGTATGAAGTGGTTAGTGTCAAACAGTATCGTCTCGACCAAATGCCGCTCGCCTCCA TTTTTGCGGCGACTCAGTCGAAACGGATTCAATTGATCACTTGTGCAGGACCGTATGACGAAAACCTTGGGTATCGGGAC CGAATCGTGGTCACGGCACACCTGATTGAAACGTAA
Upstream 100 bases:
>100_bases TTTCGTCGTCAGAAGCAAGACGCTTAAACTGATTTTCTTAGGAACGATCACATTTCTCGTATGGGGCGCTCAAGCGGAAG CTCCTGACAAACCGTTCGTC
Downstream 100 bases:
>100_bases AGATGAAGAGATGCTGACCGATCGGTCGCATCTCTTTTACTCGTAAAAAAGCCCTTCACCGTTCGGTGAAGGGCTTTGAT CGGATTAGGCATCCATACGA
Product: peptidase C60 sortase A and B
Products: NA
Alternate protein names: Secreted Protein; Sortase-Like Protein; Lipoprotein; Peptidase C; Sortase; LOW QUALITY PROTEIN Secreted Protein; C60 Family Sortase A; Sortase D Type
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MPTAEFAEPQVLTSKQVDRQTFHSNSFVPARLVIPSIDVDTSIEAVGKDEAGRMATPSDVNHVGWYQYGAKAGATGNVVL SGHLDDLNGPAIFANLDQLPIGELVTLQRKDQVATYEVVSVKQYRLDQMPLASIFAATQSKRIQLITCAGPYDENLGYRD RIVVTAHLIET
Sequences:
>Translated_171_residues MPTAEFAEPQVLTSKQVDRQTFHSNSFVPARLVIPSIDVDTSIEAVGKDEAGRMATPSDVNHVGWYQYGAKAGATGNVVL SGHLDDLNGPAIFANLDQLPIGELVTLQRKDQVATYEVVSVKQYRLDQMPLASIFAATQSKRIQLITCAGPYDENLGYRD RIVVTAHLIET >Mature_170_residues PTAEFAEPQVLTSKQVDRQTFHSNSFVPARLVIPSIDVDTSIEAVGKDEAGRMATPSDVNHVGWYQYGAKAGATGNVVLS GHLDDLNGPAIFANLDQLPIGELVTLQRKDQVATYEVVSVKQYRLDQMPLASIFAATQSKRIQLITCAGPYDENLGYRDR IVVTAHLIET
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18686; Mature: 18555
Theoretical pI: Translated: 4.93; Mature: 4.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTAEFAEPQVLTSKQVDRQTFHSNSFVPARLVIPSIDVDTSIEAVGKDEAGRMATPSDV CCCCCCCCCCEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC NHVGWYQYGAKAGATGNVVLSGHLDDLNGPAIFANLDQLPIGELVTLQRKDQVATYEVVS CCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEE VKQYRLDQMPLASIFAATQSKRIQLITCAGPYDENLGYRDRIVVTAHLIET HHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC >Mature Secondary Structure PTAEFAEPQVLTSKQVDRQTFHSNSFVPARLVIPSIDVDTSIEAVGKDEAGRMATPSDV CCCCCCCCCEECCHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCC NHVGWYQYGAKAGATGNVVLSGHLDDLNGPAIFANLDQLPIGELVTLQRKDQVATYEVVS CCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEEECCCCCCCCEEEEECCCCCEEEEEEE VKQYRLDQMPLASIFAATQSKRIQLITCAGPYDENLGYRDRIVVTAHLIET HHHHHCCCCCHHHHHHHCCCCEEEEEEECCCCCCCCCCCCEEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA