| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is nhaK [H]
Identifier: 229915955
GI number: 229915955
Start: 193685
End: 194890
Strand: Reverse
Name: nhaK [H]
Synonym: EAT1b_0223
Alternate gene names: 229915955
Gene position: 194890-193685 (Counterclockwise)
Preceding gene: 229915959
Following gene: 229915954
Centisome position: 6.5
GC content: 46.19
Gene sequence:
>1206_bases ATGATCGCGCAACAAATCATCACATTGCTACTGATTGGCTATCTCATTTATTTGATTGATTCAAAACGAAATTACTTCCC TGTCCCGGTCATCTTGGTCTTGATTGGGATTGGTCTCTCATATATCGCCTTTTTTGATTCAGTATTCATTTCAAAAGATA TGATCTTCGAGGTGTTCCTACCGGCACTTCTGTTTACATCCGCTTATCAGTTCAAATACAAAGATTTGAAAGACAATATC GGGATCATCACGATATTGAGTACGGTTGGTCTTGTCTTGACCGCCATCCTAATGGGGTATGGCACGTTTTGGATCAGCGA GCTCTTCACCCCGCTCAGCCTGACCGCCTCTTTCTTATTGGCATCCATCTTGATTCCGACCGACCCCGTTTCCGTGTCGG CGATTTTAAAGCGGAGTAAAGGTGAGAAGCGGATTGCGGATGTTGTCGAAGGTGAATCGATGGTGAACGATGGGACGAGT GTCGTCATCTTCACGATCTTCCTCAGTATGTTCGCGACAGGAGAACAGTTCTCCACGCTCAGCTTTTTAACTGAATTTTT GATTGTTTCAGCCGGAGGAATCGGCATCGGCTTCATCGTCGGATTATTACTTAAAAAATTGATGATTGTCAGCTTTAAAA AGCATGAGCTCGTCATGTTGACGATCGTCATCGCATACGGAGCATTTTATCTCGCCGACGCGCTAGAAGTATCGGGTGTC CTTGCGACCGTCACAGCCGGCATGATGCTTTCTCATGAGCTCGGCATGAAAGAGGACTACGAATCGGTCCAGCGACACTT GAATGGATTTTGGGACATCGTCATTCCGATATTGCTCGCTCTCCTGTTCTTATTGATTGGAATCGAGGCGACCAGCTATT TGTCTGTATCGCTCTGGACGTTCGCTGTTCTTTTATTCCTACTTTCGCTTCTGACCCGGTTCATCGTCGTCGGCGGTCTC GTTTATACCGTTCCTGTGTGGCGTAGAGAATTTAAAGACGATTTGACAGCGACTTCGCTCCTTACTTGGTCCGGGATTAA AGGAACGATGTCGATTGCCCTCGTCCTCTGGCTAGAGGCAGAGAACATTAACGGCTCGAGCGAAATGATATCTCTCGCGT TTGCCGTCATTTTACTCTCTCTGATCTTACAAAGCATCGGTGTCTACCCATTAACGACCTATTTAACGAATAAACATGAC GAGTGA
Upstream 100 bases:
>100_bases AAATGAATGTACTATCCCCTATATTCCACAATTCTCGTTTGATTAGACCTTGAATGGGAAGATAGTGTATAGCAACTTGA TTGCAGAGGAGGACGTCGTC
Downstream 100 bases:
>100_bases CGGAACCCTTCCTCAGAGAAGGGTTTTTTACATTCTGAAATTGACATCGCCCACTTTTAGTGTAAAATTACACTTGTAAT ATACTAGGAGGTGATTCGTT
Product: sodium/hydrogen exchanger
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MIAQQIITLLLIGYLIYLIDSKRNYFPVPVILVLIGIGLSYIAFFDSVFISKDMIFEVFLPALLFTSAYQFKYKDLKDNI GIITILSTVGLVLTAILMGYGTFWISELFTPLSLTASFLLASILIPTDPVSVSAILKRSKGEKRIADVVEGESMVNDGTS VVIFTIFLSMFATGEQFSTLSFLTEFLIVSAGGIGIGFIVGLLLKKLMIVSFKKHELVMLTIVIAYGAFYLADALEVSGV LATVTAGMMLSHELGMKEDYESVQRHLNGFWDIVIPILLALLFLLIGIEATSYLSVSLWTFAVLLFLLSLLTRFIVVGGL VYTVPVWRREFKDDLTATSLLTWSGIKGTMSIALVLWLEAENINGSSEMISLAFAVILLSLILQSIGVYPLTTYLTNKHD E
Sequences:
>Translated_401_residues MIAQQIITLLLIGYLIYLIDSKRNYFPVPVILVLIGIGLSYIAFFDSVFISKDMIFEVFLPALLFTSAYQFKYKDLKDNI GIITILSTVGLVLTAILMGYGTFWISELFTPLSLTASFLLASILIPTDPVSVSAILKRSKGEKRIADVVEGESMVNDGTS VVIFTIFLSMFATGEQFSTLSFLTEFLIVSAGGIGIGFIVGLLLKKLMIVSFKKHELVMLTIVIAYGAFYLADALEVSGV LATVTAGMMLSHELGMKEDYESVQRHLNGFWDIVIPILLALLFLLIGIEATSYLSVSLWTFAVLLFLLSLLTRFIVVGGL VYTVPVWRREFKDDLTATSLLTWSGIKGTMSIALVLWLEAENINGSSEMISLAFAVILLSLILQSIGVYPLTTYLTNKHD E >Mature_401_residues MIAQQIITLLLIGYLIYLIDSKRNYFPVPVILVLIGIGLSYIAFFDSVFISKDMIFEVFLPALLFTSAYQFKYKDLKDNI GIITILSTVGLVLTAILMGYGTFWISELFTPLSLTASFLLASILIPTDPVSVSAILKRSKGEKRIADVVEGESMVNDGTS VVIFTIFLSMFATGEQFSTLSFLTEFLIVSAGGIGIGFIVGLLLKKLMIVSFKKHELVMLTIVIAYGAFYLADALEVSGV LATVTAGMMLSHELGMKEDYESVQRHLNGFWDIVIPILLALLFLLIGIEATSYLSVSLWTFAVLLFLLSLLTRFIVVGGL VYTVPVWRREFKDDLTATSLLTWSGIKGTMSIALVLWLEAENINGSSEMISLAFAVILLSLILQSIGVYPLTTYLTNKHD E
Specific function: Transporter involved in the efflux of sodium, potassium, lithium and rubidium [H]
COG id: COG0025
COG function: function code P; NhaP-type Na+/H+ and K+/H+ antiporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family. Nhak (TC 2.A.36.3.2) subfamily [H]
Homologues:
Organism=Homo sapiens, GI41872703, Length=378, Percent_Identity=23.5449735449735, Blast_Score=80, Evalue=4e-15, Organism=Homo sapiens, GI15529998, Length=398, Percent_Identity=22.3618090452261, Blast_Score=77, Evalue=2e-14, Organism=Homo sapiens, GI194239733, Length=357, Percent_Identity=24.0896358543417, Blast_Score=77, Evalue=3e-14, Organism=Homo sapiens, GI148727259, Length=360, Percent_Identity=21.3888888888889, Blast_Score=73, Evalue=4e-13, Organism=Escherichia coli, GI1790501, Length=389, Percent_Identity=25.4498714652956, Blast_Score=89, Evalue=4e-19, Organism=Caenorhabditis elegans, GI25150332, Length=390, Percent_Identity=24.6153846153846, Blast_Score=100, Evalue=1e-21, Organism=Caenorhabditis elegans, GI71980847, Length=373, Percent_Identity=24.1286863270777, Blast_Score=79, Evalue=6e-15, Organism=Caenorhabditis elegans, GI71992107, Length=323, Percent_Identity=24.4582043343653, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI71992101, Length=323, Percent_Identity=24.4582043343653, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71993590, Length=329, Percent_Identity=24.6200607902736, Blast_Score=75, Evalue=6e-14, Organism=Caenorhabditis elegans, GI71993582, Length=364, Percent_Identity=26.3736263736264, Blast_Score=75, Evalue=9e-14, Organism=Caenorhabditis elegans, GI71999819, Length=390, Percent_Identity=23.3333333333333, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71999817, Length=390, Percent_Identity=23.3333333333333, Blast_Score=73, Evalue=2e-13, Organism=Caenorhabditis elegans, GI71999821, Length=387, Percent_Identity=23.5142118863049, Blast_Score=72, Evalue=4e-13, Organism=Caenorhabditis elegans, GI25147678, Length=395, Percent_Identity=24.3037974683544, Blast_Score=71, Evalue=9e-13, Organism=Saccharomyces cerevisiae, GI6320663, Length=215, Percent_Identity=25.1162790697674, Blast_Score=73, Evalue=1e-13, Organism=Drosophila melanogaster, GI221510740, Length=367, Percent_Identity=24.7956403269755, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI221510736, Length=367, Percent_Identity=24.7956403269755, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI221510732, Length=367, Percent_Identity=24.7956403269755, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24585580, Length=367, Percent_Identity=24.7956403269755, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24585578, Length=367, Percent_Identity=24.7956403269755, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI281360447, Length=423, Percent_Identity=24.822695035461, Blast_Score=85, Evalue=1e-16, Organism=Drosophila melanogaster, GI221473212, Length=327, Percent_Identity=26.2996941896024, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI281364513, Length=327, Percent_Identity=26.2996941896024, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221473222, Length=329, Percent_Identity=26.1398176291793, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221473215, Length=329, Percent_Identity=26.1398176291793, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI221510734, Length=367, Percent_Identity=24.2506811989101, Blast_Score=77, Evalue=2e-14, Organism=Drosophila melanogaster, GI221510738, Length=367, Percent_Identity=24.2506811989101, Blast_Score=75, Evalue=7e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006153 - InterPro: IPR018422 - InterPro: IPR018417 - InterPro: IPR004705 [H]
Pfam domain/function: PF00999 Na_H_Exchanger [H]
EC number: NA
Molecular weight: Translated: 44222; Mature: 44222
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAQQIITLLLIGYLIYLIDSKRNYFPVPVILVLIGIGLSYIAFFDSVFISKDMIFEVFL CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLFTSAYQFKYKDLKDNIGIITILSTVGLVLTAILMGYGTFWISELFTPLSLTASFLL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASILIPTDPVSVSAILKRSKGEKRIADVVEGESMVNDGTSVVIFTIFLSMFATGEQFSTL HHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHH SFLTEFLIVSAGGIGIGFIVGLLLKKLMIVSFKKHELVMLTIVIAYGAFYLADALEVSGV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LATVTAGMMLSHELGMKEDYESVQRHLNGFWDIVIPILLALLFLLIGIEATSYLSVSLWT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAVLLFLLSLLTRFIVVGGLVYTVPVWRREFKDDLTATSLLTWSGIKGTMSIALVLWLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEE ENINGSSEMISLAFAVILLSLILQSIGVYPLTTYLTNKHDE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC >Mature Secondary Structure MIAQQIITLLLIGYLIYLIDSKRNYFPVPVILVLIGIGLSYIAFFDSVFISKDMIFEVFL CCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PALLFTSAYQFKYKDLKDNIGIITILSTVGLVLTAILMGYGTFWISELFTPLSLTASFLL HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASILIPTDPVSVSAILKRSKGEKRIADVVEGESMVNDGTSVVIFTIFLSMFATGEQFSTL HHHHCCCCCHHHHHHHHHCCCHHHHHHHHCCCHHHCCCCHHHHHHHHHHHHHCCCHHHHH SFLTEFLIVSAGGIGIGFIVGLLLKKLMIVSFKKHELVMLTIVIAYGAFYLADALEVSGV HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LATVTAGMMLSHELGMKEDYESVQRHLNGFWDIVIPILLALLFLLIGIEATSYLSVSLWT HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH FAVLLFLLSLLTRFIVVGGLVYTVPVWRREFKDDLTATSLLTWSGIKGTMSIALVLWLEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHEEEEEEE ENINGSSEMISLAFAVILLSLILQSIGVYPLTTYLTNKHDE CCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA