| Definition | Exiguobacterium sp. AT1b, complete genome. |
|---|---|
| Accession | NC_012673 |
| Length | 2,999,895 |
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The map label for this gene is 229915828
Identifier: 229915828
GI number: 229915828
Start: 72481
End: 73020
Strand: Reverse
Name: 229915828
Synonym: EAT1b_0095
Alternate gene names: NA
Gene position: 73020-72481 (Counterclockwise)
Preceding gene: 229915829
Following gene: 229915827
Centisome position: 2.43
GC content: 43.15
Gene sequence:
>540_bases TTGGGAGGTGATCATCTGTTTTTTCTTCAAATGTCTGGAACACCTGGATCAGGAAAATCCACATTGGCTAAACGAATCAT CCAACACGTACATGCGGTCGTCATCGATCATGATGTTTCAAAGACCGCCCTACTCCATACGCTTCCTATTGGCAATTTCT CGGATGGAGAAATCGGGAAGATGGCTTATGATGTCGATTGGTCCCTCGTCGAGTATCACCTATCACTTGGACAAAACGTC ATTCTCGACAGTCCATGTCTCTATGACGAAATGCTCGATAAAGGGATAGCGATTTGCACCAAGTACGGAGCGACTTATCG TTATATCGAGTGTCGTCATGAAGATCACGAAGAAATTAACGCACGACTTCGAAACCGTGCCAGACGACCGAGTCAAATTG ATCAAGTTTCATATGAGAATTGGTCTAAGATGAATGCACACTGCAAACGGCCTACTAACCATCCTTACTTACAAATCTAT ACGATGGACAATCGAGAAATTCCGATTGAGCGAATTATGTCGTATCTGTTGAAAAACTAA
Upstream 100 bases:
>100_bases ATACAAAATCTAGTGAGGGATTTGAATCAACGAATATTTACTATAAAGCATTAACAAAGAACACCATGGAATATCAAGAT TTGGATTGATATCTTCTTAG
Downstream 100 bases:
>100_bases GAAGAGAACGCTTTCAGATAGAAAGTGTTTCTTTTTTTAATAATTTTGTATATTTATGCTTTACAATTAATAATCATACA TATACACTTAGTCTCATCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MGGDHLFFLQMSGTPGSGKSTLAKRIIQHVHAVVIDHDVSKTALLHTLPIGNFSDGEIGKMAYDVDWSLVEYHLSLGQNV ILDSPCLYDEMLDKGIAICTKYGATYRYIECRHEDHEEINARLRNRARRPSQIDQVSYENWSKMNAHCKRPTNHPYLQIY TMDNREIPIERIMSYLLKN
Sequences:
>Translated_179_residues MGGDHLFFLQMSGTPGSGKSTLAKRIIQHVHAVVIDHDVSKTALLHTLPIGNFSDGEIGKMAYDVDWSLVEYHLSLGQNV ILDSPCLYDEMLDKGIAICTKYGATYRYIECRHEDHEEINARLRNRARRPSQIDQVSYENWSKMNAHCKRPTNHPYLQIY TMDNREIPIERIMSYLLKN >Mature_178_residues GGDHLFFLQMSGTPGSGKSTLAKRIIQHVHAVVIDHDVSKTALLHTLPIGNFSDGEIGKMAYDVDWSLVEYHLSLGQNVI LDSPCLYDEMLDKGIAICTKYGATYRYIECRHEDHEEINARLRNRARRPSQIDQVSYENWSKMNAHCKRPTNHPYLQIYT MDNREIPIERIMSYLLKN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20608; Mature: 20477
Theoretical pI: Translated: 7.06; Mature: 7.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGGDHLFFLQMSGTPGSGKSTLAKRIIQHVHAVVIDHDVSKTALLHTLPIGNFSDGEIGK CCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCC MAYDVDWSLVEYHLSLGQNVILDSPCLYDEMLDKGIAICTKYGATYRYIECRHEDHEEIN EEECCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH ARLRNRARRPSQIDQVSYENWSKMNAHCKRPTNHPYLQIYTMDNREIPIERIMSYLLKN HHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC >Mature Secondary Structure GGDHLFFLQMSGTPGSGKSTLAKRIIQHVHAVVIDHDVSKTALLHTLPIGNFSDGEIGK CCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHEEECCCCCCCCCCCCC MAYDVDWSLVEYHLSLGQNVILDSPCLYDEMLDKGIAICTKYGATYRYIECRHEDHEEIN EEECCCHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHH ARLRNRARRPSQIDQVSYENWSKMNAHCKRPTNHPYLQIYTMDNREIPIERIMSYLLKN HHHHHHCCCCCHHHHCCCCCHHHCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA