Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229587091

Identifier: 229587091

GI number: 229587091

Start: 1050151

End: 1050465

Strand: Direct

Name: 229587091

Synonym: RAF_ORF1025

Alternate gene names: NA

Gene position: 1050151-1050465 (Clockwise)

Preceding gene: 229587090

Following gene: 229587094

Centisome position: 82.14

GC content: 30.79

Gene sequence:

>315_bases
TTGTTAATTTCAGACTCTTATAATCTTAGCTTAAACAAGCGAATCGAAATTATAGAGTACTTAATAGATAAATATAAAAA
TGATACTAAATCTATTTATTACATAACCCAACAACTTTTTGATATTTGTGATGATAACACGGATATTAAAACGCTCGAAG
CCAAGGCTAAACAGTTTTACAAATATATTGAATATTTCCGTAGTTGGGATGAGTTACCTAGTTATTGGTATATGGACTTT
AAAGGGCCATCCGGATGTGATAAGGAAGCTTTGATTATGGGCAATTCCGTAAAGCCGGAAAATGATTATATTTAG

Upstream 100 bases:

>100_bases
AATAACTTGGAATAGATTTTTAGTTAAATATCAGAAATTATTTGAGAACATTCAGAACATATTATTTAGCATCTGTAGTG
ATAGTGAGAATTTTGTAAAA

Downstream 100 bases:

>100_bases
TTAGAAAAATTATAAAATAATTCTAGAAATTATGCTTATTAGATGATATAAAGTAAAGCCATAACCGGAGAGATGGCCGA
GTGGCCGAAGGCGGCGGTTT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 104; Mature: 104

Protein sequence:

>104_residues
MLISDSYNLSLNKRIEIIEYLIDKYKNDTKSIYYITQQLFDICDDNTDIKTLEAKAKQFYKYIEYFRSWDELPSYWYMDF
KGPSGCDKEALIMGNSVKPENDYI

Sequences:

>Translated_104_residues
MLISDSYNLSLNKRIEIIEYLIDKYKNDTKSIYYITQQLFDICDDNTDIKTLEAKAKQFYKYIEYFRSWDELPSYWYMDF
KGPSGCDKEALIMGNSVKPENDYI
>Mature_104_residues
MLISDSYNLSLNKRIEIIEYLIDKYKNDTKSIYYITQQLFDICDDNTDIKTLEAKAKQFYKYIEYFRSWDELPSYWYMDF
KGPSGCDKEALIMGNSVKPENDYI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12474; Mature: 12474

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLISDSYNLSLNKRIEIIEYLIDKYKNDTKSIYYITQQLFDICDDNTDIKTLEAKAKQFY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KYIEYFRSWDELPSYWYMDFKGPSGCDKEALIMGNSVKPENDYI
HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC
>Mature Secondary Structure
MLISDSYNLSLNKRIEIIEYLIDKYKNDTKSIYYITQQLFDICDDNTDIKTLEAKAKQFY
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
KYIEYFRSWDELPSYWYMDFKGPSGCDKEALIMGNSVKPENDYI
HHHHHHHHHHCCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA