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The map label for this gene is 229587050

Identifier: 229587050

GI number: 229587050

Start: 998603

End: 998911

Strand: Direct

Name: 229587050

Synonym: RAF_ORF0973

Alternate gene names: NA

Gene position: 998603-998911 (Clockwise)

Preceding gene: 229587049

Following gene: 229587055

Centisome position: 78.1

GC content: 35.92

Gene sequence:

>309_bases
ATGTGGTGGGCAAATAAAACCGGTGATTTGAATGCAACGGCATATGCAACTCGCACTACAATAGCTGATCTTCTTTTTAC
TACTCCAACTGTGATAATTCAACCGGTTAGCGGCATAATATTAGTAAATATGCTTGGCTATAATTATTTTGATTTATGGC
TTACCTTAACTTATATCGGATACATAATCGCCGGTAGTTGTTGGCTTCTGGTGGTATGGATTCAAATTCCACTACGAAAT
ATGGCACTTGAAGCATTAAAACCGCGAATTCCCCTACCGGAAAAATATTATAAATTATTTAAATTATGA

Upstream 100 bases:

>100_bases
GTATTCATGGCAATAGAACGAGATAAATAATGGATTATCTTTTTATAAAAACTATGCATATTATTAGCTCTACCACTTTA
TTTGGTACTGCTTTTTTTTT

Downstream 100 bases:

>100_bases
TCCTACCTAGGCTGGCCGGTATTTATCAGTTTGAGTATTATTTTTTTCTTAATGGTATTTAAACCGCTATAATATACTAG
TTTAGGATAAATTTTATACT

Product: Putative integral membrane protein

Products: NA

Alternate protein names: Integral Membrane Protein-Like Protein; Integral Membrane Protein-Like; Integral Membrane-Like Protein; Exonuclease VII Large Subunit

Number of amino acids: Translated: 102; Mature: 102

Protein sequence:

>102_residues
MWWANKTGDLNATAYATRTTIADLLFTTPTVIIQPVSGIILVNMLGYNYFDLWLTLTYIGYIIAGSCWLLVVWIQIPLRN
MALEALKPRIPLPEKYYKLFKL

Sequences:

>Translated_102_residues
MWWANKTGDLNATAYATRTTIADLLFTTPTVIIQPVSGIILVNMLGYNYFDLWLTLTYIGYIIAGSCWLLVVWIQIPLRN
MALEALKPRIPLPEKYYKLFKL
>Mature_102_residues
MWWANKTGDLNATAYATRTTIADLLFTTPTVIIQPVSGIILVNMLGYNYFDLWLTLTYIGYIIAGSCWLLVVWIQIPLRN
MALEALKPRIPLPEKYYKLFKL

Specific function: Unknown

COG id: COG5528

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11742; Mature: 11742

Theoretical pI: Translated: 9.36; Mature: 9.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWWANKTGDLNATAYATRTTIADLLFTTPTVIIQPVSGIILVNMLGYNYFDLWLTLTYIG
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHCCHHHHHHHHHHHHH
YIIAGSCWLLVVWIQIPLRNMALEALKPRIPLPEKYYKLFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC
>Mature Secondary Structure
MWWANKTGDLNATAYATRTTIADLLFTTPTVIIQPVSGIILVNMLGYNYFDLWLTLTYIG
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHEEECCCHHHHHHHHCCHHHHHHHHHHHHH
YIIAGSCWLLVVWIQIPLRNMALEALKPRIPLPEKYYKLFKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA