| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is 229587032
Identifier: 229587032
GI number: 229587032
Start: 965866
End: 966132
Strand: Direct
Name: 229587032
Synonym: RAF_ORF0935
Alternate gene names: NA
Gene position: 965866-966132 (Clockwise)
Preceding gene: 229587031
Following gene: 229587033
Centisome position: 75.54
GC content: 32.21
Gene sequence:
>267_bases ATGTCTCCAAAATTCATGACATTTTACGAAAAATATATGACGATTGTCGGTACAATCGGCAATTTTATGTTCTATGTACA GGCTCATAAGATTTTCACCTGCCAATCTTCGGCTTCTGTTTCTATGCCCGCCTTTACTATAAGTGCTATTGCTCTTTGTA GTTGGCTTATATACGGCATATTAATAAAAAATACACCTATTATAATAGCAAATATAGTAGGTTTTATCGGGGCATTATTA GTTCTCTTAACCATAATAATATATTAA
Upstream 100 bases:
>100_bases TAATTTGATAAAATAACCATATAAAAACAAGTTTTTATATGATTTTAATGGATTCCCGCCTACGCAGAAATGACATAGAC CACTTTTTAAAAATAAATAT
Downstream 100 bases:
>100_bases ATAATGACTAAGCAAATCATTACTTTAGTTGGCCGTCCGAATGTAGGCAAATCAACGCTTTTCAATAGATTAAGCATACG TAAAAAAGCTATCGTTCACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 88; Mature: 87
Protein sequence:
>88_residues MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALL VLLTIIIY
Sequences:
>Translated_88_residues MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALL VLLTIIIY >Mature_87_residues SPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGILIKNTPIIIANIVGFIGALLV LLTIIIY
Specific function: Unknown
COG id: COG4095
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 9780; Mature: 9649
Theoretical pI: Translated: 9.15; Mature: 9.15
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 5.7 %Met (Translated Protein) 8.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 4.6 %Met (Mature Protein) 6.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LIKNTPIIIANIVGFIGALLVLLTIIIY HHCCCCCHHHHHHHHHHHHHHHHHHHHC >Mature Secondary Structure SPKFMTFYEKYMTIVGTIGNFMFYVQAHKIFTCQSSASVSMPAFTISAIALCSWLIYGI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHH LIKNTPIIIANIVGFIGALLVLLTIIIY HHCCCCCHHHHHHHHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA