Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229587015

Identifier: 229587015

GI number: 229587015

Start: 949033

End: 949281

Strand: Direct

Name: 229587015

Synonym: RAF_ORF0918

Alternate gene names: NA

Gene position: 949033-949281 (Clockwise)

Preceding gene: 229587014

Following gene: 229587016

Centisome position: 74.23

GC content: 33.33

Gene sequence:

>249_bases
GTGAAACAAAATTTATCTAATCAAATTAACCTACTCGAAGCAAAAACTCATTTTTCTGATCTAATACAACGTGTACAAGA
CGGAGAGCAAATTACCATTTGTAAGCATAATACGCCGGTTGCAAAAAGTATAACTCAAAAACCTAAAATGGATAATATAG
TAGAGCAAACAAGAGAATTCCGCAAAGGCAAAACATTAGAGCTCCTTATACTAATTAAAGAGCTTAGAGATGAAGGTAGA
CAATGGTGA

Upstream 100 bases:

>100_bases
TTAGGTTTGATACAAAGATATTAATTTAAACTATTAATATTACTGTATAAAATCTTATAAATAGGATAATATTAAATTAG
TCTATTATTATATTACCTAT

Downstream 100 bases:

>100_bases
ATTCTAAATCGTTTATAGCCGATTGCTCCATAACTGTCTCATGGTTCTTTTATGATGAACGTGATAAATATTCAGATTTT
ACATTAGATTATTGTTATAA

Product: Antitoxin of toxin-antitoxin (TA) system Phd

Products: NA

Alternate protein names: Antitoxin Of xin-Antitoxin

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR
QW

Sequences:

>Translated_82_residues
MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR
QW
>Mature_82_residues
MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREFRKGKTLELLILIKELRDEGR
QW

Specific function: Unknown

COG id: COG4118

COG function: function code D; Antitoxin of toxin-antitoxin stability system

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9629; Mature: 9629

Theoretical pI: Translated: 9.93; Mature: 9.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHH
RKGKTLELLILIKELRDEGRQW
HCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKQNLSNQINLLEAKTHFSDLIQRVQDGEQITICKHNTPVAKSITQKPKMDNIVEQTREF
CCCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCHHHHHHCCCCCHHHHHHHHHH
RKGKTLELLILIKELRDEGRQW
HCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA