| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is ubiG [H]
Identifier: 229586971
GI number: 229586971
Start: 914601
End: 915470
Strand: Direct
Name: ubiG [H]
Synonym: RAF_ORF0868
Alternate gene names: 229586971
Gene position: 914601-915470 (Clockwise)
Preceding gene: 229586968
Following gene: 229586972
Centisome position: 71.53
GC content: 35.17
Gene sequence:
>870_bases ATGTCTTCAATCGATAAAAAAGAATTAGAAAAATTTGAGAAAATTTCTCATAATTGGTGGAATAAGGACGGAGAATTCGG TATCTTACACCGAATAAACCCTATTCGCCTTGAATATATAATAGAGAAAATAACTACGCATTACAATAGACACCTTTCCA AACTCGCTTATAGAGAGGAATTGGTAGGAAACATGCAGCACAGCACCGCAGCGTACGCTTTGGTACGTGAGGATGCAAGC AGCAGATTGACGCACAAATTACCTCTAGAAGTAGAGTTTGAAAAGATGTCTAACGATATTTCTAAATTAGAAATATTAGA CGTCGGTTGCGGTGGAGGGTTAATTGCAACGCCTTTAGCGGCTCAAGGTTTTAACGTTACAGCCATTGATGCACTGCAAA GTAATATTGAAACGGCAACTGCTTATGCTAAGGAAAACGGCGTAAAAATAAATTATTTACAATCTACTATAGAAGAATTA GAAAGTGACAAGCTATATGATGTGGTAATTTGTCTTGAGGTTATTGAACACGTAGAAAACGTACAGCAATTTATACTAAA TTTGGTGAAGCATATTAAGCCAAACGGTATGGCAATAATTTCTACGATTAACCGTACTAAAAAAGCTTATATACTTGGAA TAATAGTTGCCGAATATATTTTAGGTTGGGTACCAAAAAACACTCATGATTATAGCAAATTCCTAAAACCGTTGGAAATT TACGAAATGCTTACGGATACCAAAATTGAAATTAAAGAGCTGAAAGGCTTGGTATATGATCCGGCTAAAAATGAGTGGAA ATTAAGCGATGATATAGACGTAAATTATTTTATGTGTTTGGGGAGAAAGAGTATGTGTTATCCTAGCTAA
Upstream 100 bases:
>100_bases TTATCCCGTGGCTTGACCACGGGATCCACTAAAGTTCTTAGGCTGTACTTATAGAGCCCGTGGTCAAGCCACGGGATGAC ATTGGAAAGAATCATAGGCT
Downstream 100 bases:
>100_bases CTTGATCAGCCTTGTTGCATGAATACCGAATCGTCATTGCGAGCGACTGTAAGGAGCGTAGCAATTCAGAAAAATAATAA AAAAATGCTAATTTTTAGCA
Product: 3-demethylubiquinone-9 3-methyltransferase
Products: NA
Alternate protein names: 3,4-dihydroxy-5-hexaprenylbenzoate methyltransferase; DHHB methyltransferase [H]
Number of amino acids: Translated: 289; Mature: 288
Protein sequence:
>289_residues MSSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREELVGNMQHSTAAYALVREDAS SRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEEL ESDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEI YEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKSMCYPS
Sequences:
>Translated_289_residues MSSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREELVGNMQHSTAAYALVREDAS SRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEEL ESDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEI YEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKSMCYPS >Mature_288_residues SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREELVGNMQHSTAAYALVREDASS RLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLAAQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEELE SDKLYDVVICLEVIEHVENVQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEIY EMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKSMCYPS
Specific function: Ubiquinone biosynthesis. [C]
COG id: COG2227
COG function: function code H; 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 RPE1 insert domain [H]
Homologues:
Organism=Homo sapiens, GI118600965, Length=280, Percent_Identity=28.2142857142857, Blast_Score=142, Evalue=3e-34, Organism=Escherichia coli, GI1788564, Length=278, Percent_Identity=32.3741007194245, Blast_Score=176, Evalue=1e-45, Organism=Caenorhabditis elegans, GI115533050, Length=284, Percent_Identity=28.169014084507, Blast_Score=119, Evalue=1e-27, Organism=Saccharomyces cerevisiae, GI6324476, Length=285, Percent_Identity=28.7719298245614, Blast_Score=115, Evalue=6e-27, Organism=Drosophila melanogaster, GI281365311, Length=279, Percent_Identity=27.9569892473118, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI24585589, Length=250, Percent_Identity=29.2, Blast_Score=104, Evalue=8e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013216 - InterPro: IPR005728 - InterPro: IPR010233 [H]
Pfam domain/function: PF08241 Methyltransf_11 [H]
EC number: =2.1.1.64 [H]
Molecular weight: Translated: 33087; Mature: 32955
Theoretical pI: Translated: 6.06; Mature: 6.06
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREE CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLA HHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHEEEEEECCCCCHHHCCHH AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEELESDKLYDVVICLEVIEHVEN CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEI HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKSMCYPS HHHHHCCCHHHHHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC >Mature Secondary Structure SSIDKKELEKFEKISHNWWNKDGEFGILHRINPIRLEYIIEKITTHYNRHLSKLAYREE CCCCHHHHHHHHHHHHHCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LVGNMQHSTAAYALVREDASSRLTHKLPLEVEFEKMSNDISKLEILDVGCGGGLIATPLA HHHCHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHCCCHHHEEEEEECCCCCHHHCCHH AQGFNVTAIDALQSNIETATAYAKENGVKINYLQSTIEELESDKLYDVVICLEVIEHVEN CCCCCEEEHHHHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH VQQFILNLVKHIKPNGMAIISTINRTKKAYILGIIVAEYILGWVPKNTHDYSKFLKPLEI HHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH YEMLTDTKIEIKELKGLVYDPAKNEWKLSDDIDVNYFMCLGRKSMCYPS HHHHHCCCHHHHHHCCCEECCCCCCCCCCCCCCCEEEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11557893 [H]