Click here to switch to the map view.

The map label for this gene is pspE

Identifier: 229586942

GI number: 229586942

Start: 870972

End: 871343

Strand: Direct

Name: pspE

Synonym: RAF_ORF0830

Alternate gene names: NA

Gene position: 870972-871343 (Clockwise)

Preceding gene: 229586935

Following gene: 229586943

Centisome position: 68.12

GC content: 29.3

Gene sequence:

>372_bases
ATGTCGGTTCAAAATATCTGTTCTACAAAAGCTTATGATATGCTAATTTCAAATGATAATGCTTTTCTTGTAGATGTTAG
AACTAGAGAAGAGTGGCAGCAAGTGGGGATACCTCATTTAGATAATAAAAATAAGGTGATCTTTCTAAGTTGGCAATTGA
ATAAAGATTTTGAAGATAATTTTTTATCTATCGTTAACGATAAAATTCATGCAATAATATTTTTTCTGTGCCGTTCAGGA
TATAGGTCATTTATCGCAGCAAATTTTATAACTAATATAGGTTATAAAAATTGTTATAATATTAGTGACGGCTTTGAAGG
AAATAATCAAGATAAAGGCTGGAAACAAAATAACTTACCGTGGCAGTTTTAA

Upstream 100 bases:

>100_bases
ATTTTAAAATGCTTTAATAATTCAGCACTCTAATAAATCCATTCTACATGGGTAAAATTCTATTAACTTTTATTATCAAT
AACAGCAAAAAAGCATAAAT

Downstream 100 bases:

>100_bases
GTGAGTACTAACCAAATAATTTTAACGGATCAAGGTAATAATTATGTAAATGTCTGGAGTCACGTGGCTCAAGATCTTTA
CAATCATTACGGTGAAACTC

Product: Rhodanese-related sulfurtransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 123; Mature: 122

Protein sequence:

>123_residues
MSVQNICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDNFLSIVNDKIHAIIFFLCRSG
YRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNLPWQF

Sequences:

>Translated_123_residues
MSVQNICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDNFLSIVNDKIHAIIFFLCRSG
YRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNLPWQF
>Mature_122_residues
SVQNICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDNFLSIVNDKIHAIIFFLCRSGY
RSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNLPWQF

Specific function: Unknown

COG id: COG0607

COG function: function code P; Rhodanese-related sulfurtransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 rhodanese domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001763 [H]

Pfam domain/function: PF00581 Rhodanese [H]

EC number: NA

Molecular weight: Translated: 14408; Mature: 14277

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: PS50206 RHODANESE_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVQNICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDN
CCCHHHHCCCCEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHH
FLSIVNDKIHAIIFFLCRSGYRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCC
WQF
CCC
>Mature Secondary Structure 
SVQNICSTKAYDMLISNDNAFLVDVRTREEWQQVGIPHLDNKNKVIFLSWQLNKDFEDN
CCHHHHCCCCEEEEEECCCEEEEEECCHHHHHHCCCCCCCCCCCEEEEEEEECCCCCHH
FLSIVNDKIHAIIFFLCRSGYRSFIAANFITNIGYKNCYNISDGFEGNNQDKGWKQNNLP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCCCCCCC
WQF
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11319266 [H]