Click here to switch to the map view.

The map label for this gene is 229586895

Identifier: 229586895

GI number: 229586895

Start: 808437

End: 810206

Strand: Direct

Name: 229586895

Synonym: RAF_ORF0774

Alternate gene names: NA

Gene position: 808437-810206 (Clockwise)

Preceding gene: 229586894

Following gene: 229586903

Centisome position: 63.23

GC content: 25.71

Gene sequence:

>1770_bases
ATGACGAAGAATATGAGGAAGCAAATGCTTAAAGTCATATCAATAATTACGATTTATTTGTTATTAAGCAGCTGTTCCGA
ATCTACCCGTGATGCGAACGGATTACTTACGGATAGCCAAAGCACGGTAATTCGGAATTATATAATATCGCAAAATTCTA
AAAACCTTAAAGTGAACCTTAAAGAAAAGTTCGGTTCAAATTTAAAAGGAGTAAAATTAATAGGAGTACAGCTAATAAAT
GAAGATTTATCAGGAATAGATTTGACTTCCTGCGAAATATTACGTGCTGATTTTGCAGGTAGCAATTTAGACAAAGCAAT
ACTTACAAATGCTATAATTCAAGAAAGTAATTTTGCAGATTCGGTAATAAAAAATATTTCCGGATATAATTCTGACTTTC
AAGGTTCAATTTTTCACAATATAACATTACAAAATACAAATTTTGTTCAATCAAATTTTAGCGATACTGCTTTTAATAAA
ACTACTATAATAAATGTCAACTTTGAAAATTCTAAATTTAGTCATGTATTATGGAACAATAATACTATCGACGGTGTTAA
TTTTCAAAAAGCTAACCTACAGAATAATAGCTTTAAAAATACTAATATAACAAATTCAATATTTTACGGTACGGATTTAG
AAAAAAGTATAATAAATAATACCAATTTTACTAATAATTATTTTGAATCTAGCAACCTAAGTCAAACTACATTAACAGCA
GTAATAATTAAGGATTCTAACTTCACACAAAGTATTTTTAATGAAGTAAATTTTAATAACGTACAAAGTAATAACTCTTG
CTTTTCATACGCTTCCTTTCAAGATTCAACATTACAAAATATTAGCCTTACTAAATGTGATTTACAAAATAGTACAATTA
GTAGTTCAGTCTTAAAGCATTTTAAAATCAATAATGCGATATTAAATAATATGAGTCTAAACGATAATCAATTTAATACT
TTATCAATAAAAAATAGTAATGCTAATTTTGTAAGGATTAATAAAACTAAAGGCTCAAATATTACTTTAGATAATATTAG
CTATACTAATAATATTTTTAGCAATAATGATTTTAAACAATTTATAGTGATTAATACTGACTTAAACAGCAGTGAAATAA
TAAACTCAAATATAACTAACGGACAATTTAATAATATAAATTTTTCTAAATCTTTAATACAAAACGTAAATTTTTCAGAT
GTTAAAATTACTTTAGGCAATTTAAACCAAGTAGCTCTAATAAATTCCACTCTAACAAATACTACGGTTATTAACTCCGT
CCTTTCTAATTCGCAAATAAATAATATTAACTACCAAGCGTATTCCGGTTTTATTAATACTAATGTTTCTAATAATATTA
TTTTAAATAGTGATAATTCGAGCAAAATTCTACCAAATAATATAGTAATAAATTCGGTAAAAGATTTGCAAAAAATAACT
CACTTAGCAAATATGAATTTAACAAATTTTGACTTGAACAACTTAATATTTGATAGAGTAGATTTTTCAAATAGTATCTT
TAAAAATGCTAACCTAACAAATACGGTAATAAAAAATTCCATTTTAAAAGAGGCTAATTTTTCTGCAGCAATACTTACTA
AAACAGATTTTTCAAACTCAATATTAACAGATAGTATATTTAAATCAGCTAAAATTGATCAGGCGGACTTTAATAACTCC
GACCTAACAAATGCCGATTTTACCGAAGCAGCAATTAAAGATACTTCGTTTGATAAAGCTAAGACAAGCGGAATGAAAGG
AGTAGAATAA

Upstream 100 bases:

>100_bases
AATATTTCAAAAACATCCTCATTTGTCGGTATGGAAAGATCGGCTTTGCATCGTAAATTAAAATTATTAAGCTTACATAT
ACCTCCTACAAATAGAATAA

Downstream 100 bases:

>100_bases
TCTTTAAATACCTTGGTCCTTATACGAACATTCAGTATGTCATCCCCGCGTGGCATTGTTGTGTGGATCAGTAAATGCTC
TTTATGTCATTCCCGCGAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 588

Protein sequence:

>589_residues
MTKNMRKQMLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVNLKEKFGSNLKGVKLIGVQLIN
EDLSGIDLTSCEILRADFAGSNLDKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFHNITLQNTNFVQSNFSDTAFNK
TTIINVNFENSKFSHVLWNNNTIDGVNFQKANLQNNSFKNTNITNSIFYGTDLEKSIINNTNFTNNYFESSNLSQTTLTA
VIIKDSNFTQSIFNEVNFNNVQSNNSCFSYASFQDSTLQNISLTKCDLQNSTISSSVLKHFKINNAILNNMSLNDNQFNT
LSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNINFSKSLIQNVNFSD
VKITLGNLNQVALINSTLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSDNSSKILPNNIVINSVKDLQKIT
HLANMNLTNFDLNNLIFDRVDFSNSIFKNANLTNTVIKNSILKEANFSAAILTKTDFSNSILTDSIFKSAKIDQADFNNS
DLTNADFTEAAIKDTSFDKAKTSGMKGVE

Sequences:

>Translated_589_residues
MTKNMRKQMLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVNLKEKFGSNLKGVKLIGVQLIN
EDLSGIDLTSCEILRADFAGSNLDKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFHNITLQNTNFVQSNFSDTAFNK
TTIINVNFENSKFSHVLWNNNTIDGVNFQKANLQNNSFKNTNITNSIFYGTDLEKSIINNTNFTNNYFESSNLSQTTLTA
VIIKDSNFTQSIFNEVNFNNVQSNNSCFSYASFQDSTLQNISLTKCDLQNSTISSSVLKHFKINNAILNNMSLNDNQFNT
LSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNINFSKSLIQNVNFSD
VKITLGNLNQVALINSTLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSDNSSKILPNNIVINSVKDLQKIT
HLANMNLTNFDLNNLIFDRVDFSNSIFKNANLTNTVIKNSILKEANFSAAILTKTDFSNSILTDSIFKSAKIDQADFNNS
DLTNADFTEAAIKDTSFDKAKTSGMKGVE
>Mature_588_residues
TKNMRKQMLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVNLKEKFGSNLKGVKLIGVQLINE
DLSGIDLTSCEILRADFAGSNLDKAILTNAIIQESNFADSVIKNISGYNSDFQGSIFHNITLQNTNFVQSNFSDTAFNKT
TIINVNFENSKFSHVLWNNNTIDGVNFQKANLQNNSFKNTNITNSIFYGTDLEKSIINNTNFTNNYFESSNLSQTTLTAV
IIKDSNFTQSIFNEVNFNNVQSNNSCFSYASFQDSTLQNISLTKCDLQNSTISSSVLKHFKINNAILNNMSLNDNQFNTL
SIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQFIVINTDLNSSEIINSNITNGQFNNINFSKSLIQNVNFSDV
KITLGNLNQVALINSTLTNTTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSDNSSKILPNNIVINSVKDLQKITH
LANMNLTNFDLNNLIFDRVDFSNSIFKNANLTNTVIKNSILKEANFSAAILTKTDFSNSILTDSIFKSAKIDQADFNNSD
LTNADFTEAAIKDTSFDKAKTSGMKGVE

Specific function: Unknown

COG id: COG1357

COG function: function code S; Uncharacterized low-complexity proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 5 pentapeptide repeat domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001646 [H]

Pfam domain/function: PF00805 Pentapeptide [H]

EC number: NA

Molecular weight: Translated: 65478; Mature: 65346

Theoretical pI: Translated: 7.44; Mature: 7.44

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKNMRKQMLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVNL
CCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE
KEKFGSNLKGVKLIGVQLINEDLSGIDLTSCEILRADFAGSNLDKAILTNAIIQESNFAD
HHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHH
SVIKNISGYNSDFQGSIFHNITLQNTNFVQSNFSDTAFNKTTIINVNFENSKFSHVLWNN
HHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEEEEEECCCCEEEEEECC
NTIDGVNFQKANLQNNSFKNTNITNSIFYGTDLEKSIINNTNFTNNYFESSNLSQTTLTA
CEECCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE
VIIKDSNFTQSIFNEVNFNNVQSNNSCFSYASFQDSTLQNISLTKCDLQNSTISSSVLKH
EEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHH
FKINNAILNNMSLNDNQFNTLSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQ
HHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEE
FIVINTDLNSSEIINSNITNGQFNNINFSKSLIQNVNFSDVKITLGNLNQVALINSTLTN
EEEEECCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCH
TTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSDNSSKILPNNIVINSVKDLQKIT
HHHHHHHHCCCCCCCCEEEEEECEEECCCCCCEEEECCCCCCCCCCCEEECCHHHHHHHH
HLANMNLTNFDLNNLIFDRVDFSNSIFKNANLTNTVIKNSILKEANFSAAILTKTDFSNS
HHHCCCCCCEEHHHHEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
ILTDSIFKSAKIDQADFNNSDLTNADFTEAAIKDTSFDKAKTSGMKGVE
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCC
>Mature Secondary Structure 
TKNMRKQMLKVISIITIYLLLSSCSESTRDANGLLTDSQSTVIRNYIISQNSKNLKVNL
CHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE
KEKFGSNLKGVKLIGVQLINEDLSGIDLTSCEILRADFAGSNLDKAILTNAIIQESNFAD
HHHHCCCCCCEEEEEEEEECCCCCCCCCCCHHEEEECCCCCCCCHHHHHHHHHHCCCHHH
SVIKNISGYNSDFQGSIFHNITLQNTNFVQSNFSDTAFNKTTIINVNFENSKFSHVLWNN
HHHHHHCCCCCCCCCEEEEEEEECCCCEECCCCCCCCCCCEEEEEEEECCCCEEEEEECC
NTIDGVNFQKANLQNNSFKNTNITNSIFYGTDLEKSIINNTNFTNNYFESSNLSQTTLTA
CEECCCCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCCCCCCCCEEEEE
VIIKDSNFTQSIFNEVNFNNVQSNNSCFSYASFQDSTLQNISLTKCDLQNSTISSSVLKH
EEEECCCCHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCEEEEECCCCCHHHHHHHHH
FKINNAILNNMSLNDNQFNTLSIKNSNANFVRINKTKGSNITLDNISYTNNIFSNNDFKQ
HHHCHHHCCCCCCCCCCEEEEEEECCCCCEEEEECCCCCEEEEECCEECCCCCCCCCCEE
FIVINTDLNSSEIINSNITNGQFNNINFSKSLIQNVNFSDVKITLGNLNQVALINSTLTN
EEEEECCCCCCHHCCCCCCCCCCCCCCHHHHHHHCCCCCEEEEEECCCCEEEEEECCCCH
TTVINSVLSNSQINNINYQAYSGFINTNVSNNIILNSDNSSKILPNNIVINSVKDLQKIT
HHHHHHHHCCCCCCCCEEEEEECEEECCCCCCEEEECCCCCCCCCCCEEECCHHHHHHHH
HLANMNLTNFDLNNLIFDRVDFSNSIFKNANLTNTVIKNSILKEANFSAAILTKTDFSNS
HHHCCCCCCEEHHHHEEECCCCCCHHHCCCCCHHHHHHHHHHHHCCCCEEEEEECCCCCC
ILTDSIFKSAKIDQADFNNSDLTNADFTEAAIKDTSFDKAKTSGMKGVE
HHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHCCCCCCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA