Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is yeaZ [C]

Identifier: 229586871

GI number: 229586871

Start: 776513

End: 777211

Strand: Direct

Name: yeaZ [C]

Synonym: RAF_ORF0742

Alternate gene names: 229586871

Gene position: 776513-777211 (Clockwise)

Preceding gene: 229586870

Following gene: 229586877

Centisome position: 60.73

GC content: 35.48

Gene sequence:

>699_bases
ATGAAAATACTAGCATTTGACACAGCCAATAATACTGCATCGGTAGCAATATCCGAAAATGAGAATATCCTTGCATGTAT
AGAAGAGTTACGTCCTTCTATGCAAGCAGAAAATCTAATGCCGATGATAGAAGACGTGATGAAATCAGCTAAATGTGCAT
ATGATGATTTAGATTATTTAGCGGTAACTAACGGACCCGGTAGCTTTACCGGCATTAGAATAGGACTTGCTAGTGCTAAA
GGTATATTATTTTCCAAGGAGAATATTAAAGCAGTAGCGGTTAGCAATTTTGAATATGCTTATTTTAGAGCCATAACTCA
AGTTACAGATTATGATAAAATATATGTCTTTTTAAACGCTTATCGCTCACAGCTTTATATGCAAGTTTTTCATAAATCAG
GACAAATAGAAGAGCCGTTATTGATAGATTTCGAGTATGCTATACAACTGCTTACAAATGAGAAAGGGAATATAGTTTGT
TGCGGTAGCGGACTTGAATTTATATATCACCAAATTATGCATTTGCCGAATATAATAACCTTGCCACGTTTTGCACGAGT
TAAAGCTTGGGTTACCTGTAGATATATTGCTAGTAGATTGTCGAGCGATGTAAAATTAAATAACTCTATCGAGCCACTAT
ACATACGCCCTCCTGATGCTAAAATCGCAATCAATTATGCCATTCCTAGTGAAAAGTAG

Upstream 100 bases:

>100_bases
TTTGCTTTCGCAGGAATGACATAAGGACTTTTTAAAAATTTCCTGGTACACTATCTATATACATACCGGTACACATAGTG
ACTTATTCAAATAATAATCT

Downstream 100 bases:

>100_bases
GAATCCATTTACTGGATTTCTATAATCAACGAAATGATATAAGCGCTTTATTATAAGTATACTACATCATCTTCATAATT
AAAGACTCCAAAATTATAAG

Product: Putative glycoprotein endopeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 232

Protein sequence:

>232_residues
MKILAFDTANNTASVAISENENILACIEELRPSMQAENLMPMIEDVMKSAKCAYDDLDYLAVTNGPGSFTGIRIGLASAK
GILFSKENIKAVAVSNFEYAYFRAITQVTDYDKIYVFLNAYRSQLYMQVFHKSGQIEEPLLIDFEYAIQLLTNEKGNIVC
CGSGLEFIYHQIMHLPNIITLPRFARVKAWVTCRYIASRLSSDVKLNNSIEPLYIRPPDAKIAINYAIPSEK

Sequences:

>Translated_232_residues
MKILAFDTANNTASVAISENENILACIEELRPSMQAENLMPMIEDVMKSAKCAYDDLDYLAVTNGPGSFTGIRIGLASAK
GILFSKENIKAVAVSNFEYAYFRAITQVTDYDKIYVFLNAYRSQLYMQVFHKSGQIEEPLLIDFEYAIQLLTNEKGNIVC
CGSGLEFIYHQIMHLPNIITLPRFARVKAWVTCRYIASRLSSDVKLNNSIEPLYIRPPDAKIAINYAIPSEK
>Mature_232_residues
MKILAFDTANNTASVAISENENILACIEELRPSMQAENLMPMIEDVMKSAKCAYDDLDYLAVTNGPGSFTGIRIGLASAK
GILFSKENIKAVAVSNFEYAYFRAITQVTDYDKIYVFLNAYRSQLYMQVFHKSGQIEEPLLIDFEYAIQLLTNEKGNIVC
CGSGLEFIYHQIMHLPNIITLPRFARVKAWVTCRYIASRLSSDVKLNNSIEPLYIRPPDAKIAINYAIPSEK

Specific function: Unknown

COG id: COG1214

COG function: function code O; Inactive homolog of metal-dependent proteases, putative molecular chaperone

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788109, Length=97, Percent_Identity=36.0824742268041, Blast_Score=70, Evalue=9e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR022496
- InterPro:   IPR000905 [H]

Pfam domain/function: PF00814 Peptidase_M22 [H]

EC number: NA

Molecular weight: Translated: 26115; Mature: 26115

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKILAFDTANNTASVAISENENILACIEELRPSMQAENLMPMIEDVMKSAKCAYDDLDYL
CEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
AVTNGPGSFTGIRIGLASAKGILFSKENIKAVAVSNFEYAYFRAITQVTDYDKIYVFLNA
EEECCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEHHH
YRSQLYMQVFHKSGQIEEPLLIDFEYAIQLLTNEKGNIVCCGSGLEFIYHQIMHLPNIIT
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHEEECCCCCEEEECCCHHHHHHHHHHCCCEEC
LPRFARVKAWVTCRYIASRLSSDVKLNNSIEPLYIRPPDAKIAINYAIPSEK
CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCEEEEEEECCCCC
>Mature Secondary Structure
MKILAFDTANNTASVAISENENILACIEELRPSMQAENLMPMIEDVMKSAKCAYDDLDYL
CEEEEEECCCCCEEEEEECCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCEE
AVTNGPGSFTGIRIGLASAKGILFSKENIKAVAVSNFEYAYFRAITQVTDYDKIYVFLNA
EEECCCCCEEEEEEEECCCCEEEEECCCEEEEEEECCCHHHHHHHHHHCCCCEEEEEHHH
YRSQLYMQVFHKSGQIEEPLLIDFEYAIQLLTNEKGNIVCCGSGLEFIYHQIMHLPNIIT
HHHHHHHHHHHCCCCCCCCEEEEHHHHHHEEECCCCCEEEECCCHHHHHHHHHHCCCEEC
LPRFARVKAWVTCRYIASRLSSDVKLNNSIEPLYIRPPDAKIAINYAIPSEK
CCCHHHHHHHHHHHHHHHHHCCCEEECCCCCEEEEECCCCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]