Click here to switch to the map view.

The map label for this gene is yhhF [C]

Identifier: 229586867

GI number: 229586867

Start: 772702

End: 773439

Strand: Direct

Name: yhhF [C]

Synonym: RAF_ORF0738

Alternate gene names: 229586867

Gene position: 772702-773439 (Clockwise)

Preceding gene: 229586866

Following gene: 229586868

Centisome position: 60.44

GC content: 35.5

Gene sequence:

>738_bases
GTGTTAAAAATAATATCCGGTAAATATAGAAACCAAATTATACCTACCGCTAAAAATATCAAATATCGACCTTCCACCGG
TAAGCTCAAAGAGGCAATATTTAGTGTATTAACCTCCGGTGAGTTTACCGGTAATAAATTATTTAACGAAAATACTCACA
TTCTCGATTTATTTGCCGGTAGCGGTAGCCTTGCTTTTGAGAGCATATCAAGAGGAGCAGGTTTTGCTACCTTAATTGAT
ATTGATACATCCTCATTAAAAATAGCAGAAGGGTTTGCTAAATCTCTAAACATTGAAAATAATGTTAATTTCGTTAATAT
TAATGCTTTAAATCTACCGAAAGCTACTAGACATCTTTTTAAACCAGCTTATAGAGAGGGATCTAAAGGAGACACGGAAC
ACAGCACCGCAGCGTACACACTAGTACGTGAGGATGCGAGTACCGGATCGACGTCTAAATTACCTCTAGAAGCGAAGTTT
GGGAAGATGTCTAATAAATCATTTGATCTTGTCTTTATAGACCCCCCTTATCATAAAAATATAGTGCCTAAAGTAATGAA
ACTGCTGATAAAAAATAATTGGCTCAAAGACGGTGCTATTATAGTTATTGAGATGGCTAAAACAGATGATTATATTTTAG
ATGAAAATATTGAAATTATACGTGAAAAACTATATGGTAAGAGTAAGCTGTTGGTTTTGAGCTTTACCGTCATTCCCGCG
AAGGCGGGAATCCAGTAA

Upstream 100 bases:

>100_bases
GCAGCAAAATTCAAGCCTAACACTAAAGGCAAAGGATTTGCCACAAAAATAAAAGACGAAAAAAAATCACACTCAATAAA
AGAAGCATATAACTAAATAA

Downstream 100 bases:

>100_bases
CACATATAAAATATAAAAACTTGTTTTTATATTTTTATTTTATTAATAGTATGTAATTTTGTACCTGTATTAAGGTTATT
TTTTCTGGATTCCCGCTTTC

Product: N6-adenine-specific methylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 245; Mature: 245

Protein sequence:

>245_residues
MLKIISGKYRNQIIPTAKNIKYRPSTGKLKEAIFSVLTSGEFTGNKLFNENTHILDLFAGSGSLAFESISRGAGFATLID
IDTSSLKIAEGFAKSLNIENNVNFVNINALNLPKATRHLFKPAYREGSKGDTEHSTAAYTLVREDASTGSTSKLPLEAKF
GKMSNKSFDLVFIDPPYHKNIVPKVMKLLIKNNWLKDGAIIVIEMAKTDDYILDENIEIIREKLYGKSKLLVLSFTVIPA
KAGIQ

Sequences:

>Translated_245_residues
MLKIISGKYRNQIIPTAKNIKYRPSTGKLKEAIFSVLTSGEFTGNKLFNENTHILDLFAGSGSLAFESISRGAGFATLID
IDTSSLKIAEGFAKSLNIENNVNFVNINALNLPKATRHLFKPAYREGSKGDTEHSTAAYTLVREDASTGSTSKLPLEAKF
GKMSNKSFDLVFIDPPYHKNIVPKVMKLLIKNNWLKDGAIIVIEMAKTDDYILDENIEIIREKLYGKSKLLVLSFTVIPA
KAGIQ
>Mature_245_residues
MLKIISGKYRNQIIPTAKNIKYRPSTGKLKEAIFSVLTSGEFTGNKLFNENTHILDLFAGSGSLAFESISRGAGFATLID
IDTSSLKIAEGFAKSLNIENNVNFVNINALNLPKATRHLFKPAYREGSKGDTEHSTAAYTLVREDASTGSTSKLPLEAKF
GKMSNKSFDLVFIDPPYHKNIVPKVMKLLIKNNWLKDGAIIVIEMAKTDDYILDENIEIIREKLYGKSKLLVLSFTVIPA
KAGIQ

Specific function: Unknown

COG id: COG0742

COG function: function code L; N6-adenine-specific methylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 RPE1 insert domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002052
- InterPro:   IPR005728
- InterPro:   IPR004398 [H]

Pfam domain/function: PF03602 Cons_hypoth95 [H]

EC number: 2.1.1.- [C]

Molecular weight: Translated: 27074; Mature: 27074

Theoretical pI: Translated: 10.03; Mature: 10.03

Prosite motif: PS00092 N6_MTASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKIISGKYRNQIIPTAKNIKYRPSTGKLKEAIFSVLTSGEFTGNKLFNENTHILDLFAG
CEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEC
SGSLAFESISRGAGFATLIDIDTSSLKIAEGFAKSLNIENNVNFVNINALNLPKATRHLF
CCCHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHH
KPAYREGSKGDTEHSTAAYTLVREDASTGSTSKLPLEAKFGKMSNKSFDLVFIDPPYHKN
HHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCC
IVPKVMKLLIKNNWLKDGAIIVIEMAKTDDYILDENIEIIREKLYGKSKLLVLSFTVIPA
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHCCCCEEEEEEEEEECC
KAGIQ
CCCCC
>Mature Secondary Structure
MLKIISGKYRNQIIPTAKNIKYRPSTGKLKEAIFSVLTSGEFTGNKLFNENTHILDLFAG
CEEEECCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHCCCCCCCEEECCCCEEEEEEEC
SGSLAFESISRGAGFATLIDIDTSSLKIAEGFAKSLNIENNVNFVNINALNLPKATRHLF
CCCHHHHHHHCCCCEEEEEEECCCCEEHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHH
KPAYREGSKGDTEHSTAAYTLVREDASTGSTSKLPLEAKFGKMSNKSFDLVFIDPPYHKN
HHHHCCCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHCCCCCCCCEEEEEECCCCCCC
IVPKVMKLLIKNNWLKDGAIIVIEMAKTDDYILDENIEIIREKLYGKSKLLVLSFTVIPA
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCEEECCCHHHHHHHHCCCCEEEEEEEEEECC
KAGIQ
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Methyltransferases Protein + DNA = Protein-DNA [C]

General reaction: Transferring one-carbon groups [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9823893; 11030655 [H]