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The map label for this gene is hslV

Identifier: 229586581

GI number: 229586581

Start: 430290

End: 430838

Strand: Direct

Name: hslV

Synonym: RAF_ORF0402

Alternate gene names: 229586581

Gene position: 430290-430838 (Clockwise)

Preceding gene: 229586574

Following gene: 229586582

Centisome position: 33.65

GC content: 35.52

Gene sequence:

>549_bases
ATGTCAGATAATTTATCCTTACACGGTACAACAATACTTTGTTTAAAAAAGAACGAAGAAATAATTATAGCAGCAGATGG
ACAAGTCTCGCATGGTAATACCGTACTAAAATCTACAGCACGAAAACTTCGGACTATAGCAAATAATAAAATTATTGCCG
GTTTTGCGGGTTCTACGGCTGACGGTCTTGCGTTATTTGAAAAGCTTGCAGTAAAGATAGAGCAACATAAGCATAATTTA
CTTAGAAGTGCAGTTGAGCTTGCAAAAGATTGGCGTAGCGATAAATATTTGAGACGTTTGGAAGCAATGATGATTGTTGC
TGATCGTAGTCATATATTAATTTTAACCGGTAACGGTGATGTTGTAGAGCCTGAAAATAATGTTGCAGCAATAGGTTCAG
GCGGTTTATTTGCGCTATCTGCCGCTCGCGCTCTAATGTCTTACGAGAATAATTTAACTGCTGAAGAAATTGCTTTAAAA
TCTATGAATATAGCTGCAGATTTGTGTGTATTTTCTAATCATAATATTATAATGGAAAAAGTTGTATGA

Upstream 100 bases:

>100_bases
ACTCCTTGCTCTTTTCCAAATTAAACTTCGTCTATTCGTCTACTTAACAGTAATTCTAATAGTACTTAATTAACAACTTA
ATATCAATAAATTTTATATT

Downstream 100 bases:

>100_bases
AAGCTACTAAAACTACTTATAAAAAAGATCCTATGGGGCTTACCCCTTCTCAAATAGTGAATGAACTTAATAGATTTATC
GTAGGTCAAGAAAAGGCCAA

Product: ATP-dependent protease peptidase subunit

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 181

Protein sequence:

>182_residues
MSDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALFEKLAVKIEQHKHNL
LRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALK
SMNIAADLCVFSNHNIIMEKVV

Sequences:

>Translated_182_residues
MSDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALFEKLAVKIEQHKHNL
LRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALK
SMNIAADLCVFSNHNIIMEKVV
>Mature_181_residues
SDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTADGLALFEKLAVKIEQHKHNLL
RSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGDVVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKS
MNIAADLCVFSNHNIIMEKVV

Specific function: Protease subunit of a proteasome-like degradation complex believed to be a general protein degrading machinery

COG id: COG5405

COG function: function code O; ATP-dependent protease HslVU (ClpYQ), peptidase subunit

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase T1B family. HslV subfamily

Homologues:

Organism=Escherichia coli, GI1790367, Length=172, Percent_Identity=51.7441860465116, Blast_Score=192, Evalue=2e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): HSLV_RICAE (C3PN29)

Other databases:

- EMBL:   CP001612
- RefSeq:   YP_002845082.1
- ProteinModelPortal:   C3PN29
- SMR:   C3PN29
- GeneID:   7815077
- GenomeReviews:   CP001612_GR
- KEGG:   raf:RAF_ORF0402
- OMA:   AADICVY
- ProtClustDB:   PRK05456
- HAMAP:   MF_00248
- InterPro:   IPR022281
- InterPro:   IPR001353
- TIGRFAMs:   TIGR03692

Pfam domain/function: PF00227 Proteasome

EC number: 3.4.25.-

Molecular weight: Translated: 19738; Mature: 19607

Theoretical pI: Translated: 7.68; Mature: 7.68

Prosite motif: NA

Important sites: ACT_SITE 10-10

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA
CCCCEEECCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC
DGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCEEEEEECCCC
VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK
EECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEE
VV
CC
>Mature Secondary Structure 
SDNLSLHGTTILCLKKNEEIIIAADGQVSHGNTVLKSTARKLRTIANNKIIAGFAGSTA
CCCEEECCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHHHHHHCCCEEEEECCCCC
DGLALFEKLAVKIEQHKHNLLRSAVELAKDWRSDKYLRRLEAMMIVADRSHILILTGNGD
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHEEEECCCEEEEEECCCC
VVEPENNVAAIGSGGLFALSAARALMSYENNLTAEEIALKSMNIAADLCVFSNHNIIMEK
EECCCCCEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCEEEEEEECCCCEEEEE
VV
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Hydrolase; Acting on peptide bonds (Peptidases); Endopeptidases of unknown catalytic mechanism [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA