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The map label for this gene is 229586573

Identifier: 229586573

GI number: 229586573

Start: 420571

End: 421542

Strand: Direct

Name: 229586573

Synonym: RAF_ORF0394

Alternate gene names: NA

Gene position: 420571-421542 (Clockwise)

Preceding gene: 229586572

Following gene: 229586574

Centisome position: 32.89

GC content: 35.8

Gene sequence:

>972_bases
ATGAAAAGTAATCAAAATAAGGATAATTTTACGGTTTCCCTTAGCTTCTCTATTGTTCTGCACTTACTTCTTTTATATTT
TTTTCTATTCGGTATGCCGTCACTTTTTGAAAAATTACCGGAAGAGCAAACTATAACTTTTGAAATGTTACCTGTTAGCA
ATAAATCAAATATTATCACTCAGACAAAGCAAAAAGAAGCCCCTATAGAAAACGAAGACGCTAAAAAATCTGAGCAGAGT
AAGCAAAAAGAAGAACCGCAAGATTTGTCTAAAGAAGAAAAAACAAAAGAGCCTGAGGCTAAAACAATGGAAGCAAAGCC
TAAAATAGAAGAGAAAAAACCTATAGAAGAACCAAAGTCTGAAGAAGCAAAAGAAGCGTTACCTGAGAAGAAAGAAGAAG
TAAAGGAAGAAAAACCTAAAGAAGAAGAAAAAAAACAAGCAGAAGAAAAGAAGAAGCCCGAAGAAAAGAAAGAGGAAACG
AAACCGGCTGAGAAACCTAAAGATGTGAAGAAAAAAGAGCCTAAAACCGATGAGCTTGATTCTTTGCTGAAGCATTTAGA
GCAATCTTCAGAAGGGGATAATGTAAAATCCAATAAGCATCAAAGGTCAAAAAAAGCTGATAATGCACAAGAAGCTAAAG
GGGTTTATACGGATGGGCTGCCTCTTTCCGATAGTGAAACATCTTTGATAAAAAGACAGATTGAAAGACATTGGAGTAAT
GTACCGGCAGGAGTTAGAGGTAATAATAAGGTAAAAGTCATTATTAGTATTACGCTAGATAAAGCAGGTAATGTTGAGCA
GGCAAAGGTTAACAAAAAAATCTGTCCTAATATTCCGGCTAGTGTTTGTGAAGCTTTGGCAGATAATGCCATTAGAGCGG
TATGGCAAGCAAGCCCTATCGAAAACCTTGACTCTGCACGCTTTAACCATTGGAAAGAGATGAATTTTAGCTTTGATCCA
AGTAAATTGTAG

Upstream 100 bases:

>100_bases
GGCGATAGGAATGTTTCTTATGGGCAGGTAGTGGAGATAGTTGCCGAAATTCATGCTGCCGGCTTTTCTCGTGTAGCTCT
TATTTCAAATATTAAAAATA

Downstream 100 bases:

>100_bases
GTTGGGTATTGCCTGCGTGGATACCACCCCGTCATTACGAGCAGTCGTAGACTGCATGGCAATCTCATGAAATAATAACA
AACTCCTGAGATTGCTTCAT

Product: Periplasmic protein TonB, links inner and outer membranes

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 323; Mature: 323

Protein sequence:

>323_residues
MKSNQNKDNFTVSLSFSIVLHLLLLYFFLFGMPSLFEKLPEEQTITFEMLPVSNKSNIITQTKQKEAPIENEDAKKSEQS
KQKEEPQDLSKEEKTKEPEAKTMEAKPKIEEKKPIEEPKSEEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEET
KPAEKPKDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSN
VPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEMNFSFDP
SKL

Sequences:

>Translated_323_residues
MKSNQNKDNFTVSLSFSIVLHLLLLYFFLFGMPSLFEKLPEEQTITFEMLPVSNKSNIITQTKQKEAPIENEDAKKSEQS
KQKEEPQDLSKEEKTKEPEAKTMEAKPKIEEKKPIEEPKSEEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEET
KPAEKPKDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSN
VPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEMNFSFDP
SKL
>Mature_323_residues
MKSNQNKDNFTVSLSFSIVLHLLLLYFFLFGMPSLFEKLPEEQTITFEMLPVSNKSNIITQTKQKEAPIENEDAKKSEQS
KQKEEPQDLSKEEKTKEPEAKTMEAKPKIEEKKPIEEPKSEEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEET
KPAEKPKDVKKKEPKTDELDSLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSN
VPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPIENLDSARFNHWKEMNFSFDP
SKL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 36861; Mature: 36861

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSNQNKDNFTVSLSFSIVLHLLLLYFFLFGMPSLFEKLPEEQTITFEMLPVSNKSNIIT
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCC
QTKQKEAPIENEDAKKSEQSKQKEEPQDLSKEEKTKEPEAKTMEAKPKIEEKKPIEEPKS
CCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCH
EEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEETKPAEKPKDVKKKEPKTDELD
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCHHHHH
SLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSN
HHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
VPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPI
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
ENLDSARFNHWKEMNFSFDPSKL
HHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MKSNQNKDNFTVSLSFSIVLHLLLLYFFLFGMPSLFEKLPEEQTITFEMLPVSNKSNIIT
CCCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHCCCCCCEEEEEEECCCCCCCCC
QTKQKEAPIENEDAKKSEQSKQKEEPQDLSKEEKTKEPEAKTMEAKPKIEEKKPIEEPKS
CCHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCCCCCH
EEAKEALPEKKEEVKEEKPKEEEKKQAEEKKKPEEKKEETKPAEKPKDVKKKEPKTDELD
HHHHHHCCHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHCCCCCCCHHHHHCCCCHHHHH
SLLKHLEQSSEGDNVKSNKHQRSKKADNAQEAKGVYTDGLPLSDSETSLIKRQIERHWSN
HHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHC
VPAGVRGNNKVKVIISITLDKAGNVEQAKVNKKICPNIPASVCEALADNAIRAVWQASPI
CCCCCCCCCEEEEEEEEEECCCCCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHCCCH
ENLDSARFNHWKEMNFSFDPSKL
HHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA