| Definition | Rickettsia africae ESF-5 chromosome, complete genome. |
|---|---|
| Accession | NC_012633 |
| Length | 1,278,540 |
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The map label for this gene is uhpC [H]
Identifier: 229586294
GI number: 229586294
Start: 75316
End: 76611
Strand: Direct
Name: uhpC [H]
Synonym: RAF_ORF0077
Alternate gene names: 229586294
Gene position: 75316-76611 (Clockwise)
Preceding gene: 229586293
Following gene: 229586295
Centisome position: 5.89
GC content: 34.72
Gene sequence:
>1296_bases ATGACAAATACAAGATCCAAAATTAAAATTCCAAGATCGCCATATGTAAAAAAATATAATAGTTGGCGAGTAAGGATTTT GTATTCTATTATTATAGGTTACGCAACTTTTTATTTTTGTCGTCAGAATTTTAATATAGCAACTCCTGCTATAAGAGAAT ATTTTGGGGTTACTAAAACGCAAATTGGCTGGATATTAACTGCTTCATCTATTATGTATGGAGTTAGTAAAGCGTGTAAC GGGTTTATTAGCGATAAAGTTAATGCTCGGATATTTATGGTTTTGGGTCTTTTATTTGTCGGGATCATTACTATGCTAAT AGGTTTTTCAGATTCTTTATGGCTTATAGGAATTTTATGGATAGCCAGTAACTGGTTTCAATCTATGGGCTGGCCTCCTG CAACAAAGATGCTTACTCACTGGTTCGCTTCAAAAGAACTTGGAACTAAATGGGCTATGGGTGCAACTTCTAATCAAATA GGTGGTGCCCTTGCTATGATAAGCTGCGGTTATTTAATCGATAAATTTGATTGGAGAGCTGCCTTTTTTGTTCCAGGTGT AGTTGCTTGTGTAGTATCGCTTTTTTTATATAATAGGCTTCGTAATTCTCCAAAAGAAGTAGATTTATCTACCGTAGAGG AATATAAAGAATATCCGCTTGAAGCTATAGGAGATTATGAGAAGCTATTAACTCCACAATTACTTAAAATGGTCTTTTGT AATAAGCTAATATGGTATGTTTGTTTAGCAAACATGTTTGTTTATATAATACGTTCCGGAGTAATTTATTGGGCTCCAAC ATTTTTAAAAGATTTACGTAATATAAGTCTTGCAAATGCAGGCTTACAAATCGGTTTATATGAAATGATAGGTATCCCAG GGGCATTAATAGCAGGTGTTTTATCTGATAAACTATTTCAAGGTCGTCGAGGTCCTGTTGCATCCATATGTATGGTATTG CTTAGCTTATTGTTAGTCTTGTTTTGGAAACTTCCTATTCACAGTGAATTATTAAGTATAGTAATTCTTTCTTTAATAGG CTTTTTTGTTTCAGGACCTCAGCTCCTTGTAGGTATAGCAGCTGCTGATTTTAGTACCCGTCAGGCTGTCGGTACGGCTA ATGGATTATCAGGATTATTTGGTTATTTAGGAGCGGCTATTGCGGGAGTCGGCGTAGGATGGATTAGCGATAATTATGGT TGGAATGGGGTATTTATATTTTTCAGTATTTCTGCTCTTTTAGGAGGAGGATTATTTGCTTTAATATGGAATCGTTCAGC TAAAAAATATATTTAA
Upstream 100 bases:
>100_bases TATAAAGTTTTGGTAAATAAAACCGAAAATAGAATTTGTTAAAATTTATTTACTGCTAGACTCTTAAACTTGCTTTTTTT ATACTCGGAGAGTTTATAAT
Downstream 100 bases:
>100_bases TAATTATAATAAATAGGTTACAAAATGACAATACAATATACTTTTTCAATGATTAAGCCTGATGCTATCAAAAGGAATAA AATAGGGCAAGTTAATACTT
Product: Sugar phosphate permease
Products: Proton [Cytoplasm]; glycerol-3-phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 431; Mature: 430
Protein sequence:
>431_residues MTNTRSKIKIPRSPYVKKYNSWRVRILYSIIIGYATFYFCRQNFNIATPAIREYFGVTKTQIGWILTASSIMYGVSKACN GFISDKVNARIFMVLGLLFVGIITMLIGFSDSLWLIGILWIASNWFQSMGWPPATKMLTHWFASKELGTKWAMGATSNQI GGALAMISCGYLIDKFDWRAAFFVPGVVACVVSLFLYNRLRNSPKEVDLSTVEEYKEYPLEAIGDYEKLLTPQLLKMVFC NKLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNISLANAGLQIGLYEMIGIPGALIAGVLSDKLFQGRRGPVASICMVL LSLLLVLFWKLPIHSELLSIVILSLIGFFVSGPQLLVGIAAADFSTRQAVGTANGLSGLFGYLGAAIAGVGVGWISDNYG WNGVFIFFSISALLGGGLFALIWNRSAKKYI
Sequences:
>Translated_431_residues MTNTRSKIKIPRSPYVKKYNSWRVRILYSIIIGYATFYFCRQNFNIATPAIREYFGVTKTQIGWILTASSIMYGVSKACN GFISDKVNARIFMVLGLLFVGIITMLIGFSDSLWLIGILWIASNWFQSMGWPPATKMLTHWFASKELGTKWAMGATSNQI GGALAMISCGYLIDKFDWRAAFFVPGVVACVVSLFLYNRLRNSPKEVDLSTVEEYKEYPLEAIGDYEKLLTPQLLKMVFC NKLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNISLANAGLQIGLYEMIGIPGALIAGVLSDKLFQGRRGPVASICMVL LSLLLVLFWKLPIHSELLSIVILSLIGFFVSGPQLLVGIAAADFSTRQAVGTANGLSGLFGYLGAAIAGVGVGWISDNYG WNGVFIFFSISALLGGGLFALIWNRSAKKYI >Mature_430_residues TNTRSKIKIPRSPYVKKYNSWRVRILYSIIIGYATFYFCRQNFNIATPAIREYFGVTKTQIGWILTASSIMYGVSKACNG FISDKVNARIFMVLGLLFVGIITMLIGFSDSLWLIGILWIASNWFQSMGWPPATKMLTHWFASKELGTKWAMGATSNQIG GALAMISCGYLIDKFDWRAAFFVPGVVACVVSLFLYNRLRNSPKEVDLSTVEEYKEYPLEAIGDYEKLLTPQLLKMVFCN KLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNISLANAGLQIGLYEMIGIPGALIAGVLSDKLFQGRRGPVASICMVLL SLLLVLFWKLPIHSELLSIVILSLIGFFVSGPQLLVGIAAADFSTRQAVGTANGLSGLFGYLGAAIAGVGVGWISDNYGW NGVFIFFSISALLGGGLFALIWNRSAKKYI
Specific function: Transport protein for sugar phosphate uptake [H]
COG id: COG2271
COG function: function code G; Sugar phosphate permease
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily. Organophosphate:Pi antiporter (OPA) (TC 2.A.1.4) family [H]
Homologues:
Organism=Homo sapiens, GI256219543, Length=421, Percent_Identity=25.6532066508314, Blast_Score=157, Evalue=2e-38, Organism=Homo sapiens, GI256219598, Length=400, Percent_Identity=25.75, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI4503847, Length=400, Percent_Identity=25.75, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI256219483, Length=400, Percent_Identity=25.75, Blast_Score=155, Evalue=7e-38, Organism=Homo sapiens, GI256219564, Length=330, Percent_Identity=24.8484848484848, Blast_Score=110, Evalue=2e-24, Organism=Homo sapiens, GI223717983, Length=384, Percent_Identity=23.1770833333333, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI38093649, Length=384, Percent_Identity=23.1770833333333, Blast_Score=91, Evalue=2e-18, Organism=Homo sapiens, GI46361976, Length=401, Percent_Identity=25.1870324189526, Blast_Score=84, Evalue=3e-16, Organism=Escherichia coli, GI1788573, Length=426, Percent_Identity=34.037558685446, Blast_Score=274, Evalue=8e-75, Organism=Escherichia coli, GI87082310, Length=398, Percent_Identity=38.6934673366834, Blast_Score=272, Evalue=4e-74, Organism=Escherichia coli, GI2367259, Length=406, Percent_Identity=32.0197044334975, Blast_Score=155, Evalue=4e-39, Organism=Escherichia coli, GI87082320, Length=411, Percent_Identity=22.8710462287105, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789515, Length=429, Percent_Identity=22.8438228438228, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI2367379, Length=324, Percent_Identity=23.1481481481481, Blast_Score=84, Evalue=2e-17, Organism=Escherichia coli, GI1789152, Length=432, Percent_Identity=20.3703703703704, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI2367193, Length=416, Percent_Identity=21.3942307692308, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI17542316, Length=430, Percent_Identity=22.093023255814, Blast_Score=92, Evalue=5e-19, Organism=Caenorhabditis elegans, GI17561094, Length=399, Percent_Identity=24.0601503759398, Blast_Score=87, Evalue=2e-17, Organism=Caenorhabditis elegans, GI133901856, Length=445, Percent_Identity=20.8988764044944, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI133901854, Length=445, Percent_Identity=20.8988764044944, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI17564202, Length=348, Percent_Identity=22.4137931034483, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17564204, Length=348, Percent_Identity=22.4137931034483, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI133930953, Length=384, Percent_Identity=23.9583333333333, Blast_Score=73, Evalue=3e-13, Organism=Drosophila melanogaster, GI24656866, Length=457, Percent_Identity=22.3194748358862, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI45550478, Length=457, Percent_Identity=22.3194748358862, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24656861, Length=457, Percent_Identity=22.5382932166302, Blast_Score=100, Evalue=2e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000849 - InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 - InterPro: IPR021159 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 47813; Mature: 47682
Theoretical pI: Translated: 9.87; Mature: 9.87
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTNTRSKIKIPRSPYVKKYNSWRVRILYSIIIGYATFYFCRQNFNIATPAIREYFGVTKT CCCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHH QIGWILTASSIMYGVSKACNGFISDKVNARIFMVLGLLFVGIITMLIGFSDSLWLIGILW HHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IASNWFQSMGWPPATKMLTHWFASKELGTKWAMGATSNQIGGALAMISCGYLIDKFDWRA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHCHHHHHHHHHHHHHCCCCCH AFFVPGVVACVVSLFLYNRLRNSPKEVDLSTVEEYKEYPLEAIGDYEKLLTPQLLKMVFC HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH NKLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNISLANAGLQIGLYEMIGIPGALIAGV HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHH LSDKLFQGRRGPVASICMVLLSLLLVLFWKLPIHSELLSIVILSLIGFFVSGPQLLVGIA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHEEEH AADFSTRQAVGTANGLSGLFGYLGAAIAGVGVGWISDNYGWNGVFIFFSISALLGGGLFA HHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEHHHHHHHHHCCCHHE LIWNRSAKKYI EHCCCCCCCCC >Mature Secondary Structure TNTRSKIKIPRSPYVKKYNSWRVRILYSIIIGYATFYFCRQNFNIATPAIREYFGVTKT CCCCCCEECCCCCCHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCHH QIGWILTASSIMYGVSKACNGFISDKVNARIFMVLGLLFVGIITMLIGFSDSLWLIGILW HHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHH IASNWFQSMGWPPATKMLTHWFASKELGTKWAMGATSNQIGGALAMISCGYLIDKFDWRA HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEECCCCCCHHCHHHHHHHHHHHHHCCCCCH AFFVPGVVACVVSLFLYNRLRNSPKEVDLSTVEEYKEYPLEAIGDYEKLLTPQLLKMVFC HHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCHHHHCCHHHHHHHHHHHHHHH NKLIWYVCLANMFVYIIRSGVIYWAPTFLKDLRNISLANAGLQIGLYEMIGIPGALIAGV HHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHCHHHCCCCHHHHHHHHCCCHHHHHHH LSDKLFQGRRGPVASICMVLLSLLLVLFWKLPIHSELLSIVILSLIGFFVSGPQLLVGIA HHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHEEEH AADFSTRQAVGTANGLSGLFGYLGAAIAGVGVGWISDNYGWNGVFIFFSISALLGGGLFA HHCCHHHHHHCCCCHHHHHHHHHHHHHHHCCHHEECCCCCCCCEEHHHHHHHHHCCCHHE LIWNRSAKKYI EHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: Proton [Periplasm]; glycerol-3-phosphate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + glycerol-3-phosphate [Periplasm] = Proton [Cytoplasm] + glycerol-3-phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10192388; 10684935; 10871362 [H]