Definition Rickettsia africae ESF-5 chromosome, complete genome.
Accession NC_012633
Length 1,278,540

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The map label for this gene is 229586291

Identifier: 229586291

GI number: 229586291

Start: 71813

End: 72661

Strand: Direct

Name: 229586291

Synonym: RAF_ORF0074

Alternate gene names: NA

Gene position: 71813-72661 (Clockwise)

Preceding gene: 229586290

Following gene: 229586293

Centisome position: 5.62

GC content: 33.1

Gene sequence:

>849_bases
ATGGCATACCGCACTAATGCAGCTGCTGCTATTAATGTCGGATTCTTTGAAATCGCTGGTAGTGATGACGGCAGACCAAG
TCTTATTTTAATGATAGACAGCAAGCTATTTAGCCTTAGAAAACAACTACAAAGTTTGTTAATTATAGATCAGGGCAATA
TTCAAATTACCAAGGCTAGTGCAAAAATTTTAGTAGCAATAGGCGATAAATCTGTTATTCCAAATCAAGTTCATTATTTT
TCAAACCTAAAAGATACTACTTTCTATAATGATGTTTGGGCGTCTACCACATTAACGTCGTATACTAACAAAGAAATTTT
GATTGATCAGAATAGGTCTAATTTTATTGTTACGGCAATAAGTAAGCATGGTGATAATCAAATCCCACAGAAAGGCTTTA
TATTGTCCTTTCCACAAGCAACAAGTTTGCCGGTAGTAAATATAAATGATTCTGTAAAGTTAATTTTGGAATTTATCGAT
AAAGACGGTAAGCTTATAAATTTAAGTAACACTGCTTCAATAGTAACCGGTATTCCCTTATTGGTTCAAAACGGTAAAAA
TGTTGTAGATAATCCAAAGCAAGATGATCCGGCTCATGCTCGTACTGCCTTAGGAGTGTGTAATGACGGCACTATAGTTA
TAGTTGTAGTCGAGCATATTTATAAGCAACATGTAAAAGACCTTAAGCTTGTGCAAGTAAGATCAATATTACGGCAAGAG
AAAGAAATAAATGTTGATAAATTAATAATCCCTGAAGCTTTGAAAATTTTAGAAAAACACCTTGTTAATTATACTGTGAT
AGGATTAACTAAAACAGAACTTGCAGATTATATGTTAACTTGGATATGA

Upstream 100 bases:

>100_bases
AAGCATGTGATTCATGTCTTAACTATTGATCCTAAGAATTTTGGGTTAAAACTAGTTAAAGCTCATAATCAGGTGATAAG
GCAGAGAAACAGTAAACGTT

Downstream 100 bases:

>100_bases
ATCGGCAATCAATTTATACGGTGGCGGTTCTTCTACATTATTCATGGGCGGAAAAATTATAAATAATGTAACAGGTGATG
AAGATGAAGCTTTAGGCGAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MAYRTNAAAAINVGFFEIAGSDDGRPSLILMIDSKLFSLRKQLQSLLIIDQGNIQITKASAKILVAIGDKSVIPNQVHYF
SNLKDTTFYNDVWASTTLTSYTNKEILIDQNRSNFIVTAISKHGDNQIPQKGFILSFPQATSLPVVNINDSVKLILEFID
KDGKLINLSNTASIVTGIPLLVQNGKNVVDNPKQDDPAHARTALGVCNDGTIVIVVVEHIYKQHVKDLKLVQVRSILRQE
KEINVDKLIIPEALKILEKHLVNYTVIGLTKTELADYMLTWI

Sequences:

>Translated_282_residues
MAYRTNAAAAINVGFFEIAGSDDGRPSLILMIDSKLFSLRKQLQSLLIIDQGNIQITKASAKILVAIGDKSVIPNQVHYF
SNLKDTTFYNDVWASTTLTSYTNKEILIDQNRSNFIVTAISKHGDNQIPQKGFILSFPQATSLPVVNINDSVKLILEFID
KDGKLINLSNTASIVTGIPLLVQNGKNVVDNPKQDDPAHARTALGVCNDGTIVIVVVEHIYKQHVKDLKLVQVRSILRQE
KEINVDKLIIPEALKILEKHLVNYTVIGLTKTELADYMLTWI
>Mature_281_residues
AYRTNAAAAINVGFFEIAGSDDGRPSLILMIDSKLFSLRKQLQSLLIIDQGNIQITKASAKILVAIGDKSVIPNQVHYFS
NLKDTTFYNDVWASTTLTSYTNKEILIDQNRSNFIVTAISKHGDNQIPQKGFILSFPQATSLPVVNINDSVKLILEFIDK
DGKLINLSNTASIVTGIPLLVQNGKNVVDNPKQDDPAHARTALGVCNDGTIVIVVVEHIYKQHVKDLKLVQVRSILRQEK
EINVDKLIIPEALKILEKHLVNYTVIGLTKTELADYMLTWI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31306; Mature: 31174

Theoretical pI: Translated: 8.41; Mature: 8.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAYRTNAAAAINVGFFEIAGSDDGRPSLILMIDSKLFSLRKQLQSLLIIDQGNIQITKAS
CCEECCCCEEEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHEEEEECCCEEEEEEC
AKILVAIGDKSVIPNQVHYFSNLKDTTFYNDVWASTTLTSYTNKEILIDQNRSNFIVTAI
EEEEEEECCCCCCCCHHHHHCCCCCCCEECCHHCCCEEECCCCCEEEEECCCCCEEEEEE
SKHGDNQIPQKGFILSFPQATSLPVVNINDSVKLILEFIDKDGKLINLSNTASIVTGIPL
ECCCCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHCCEE
LVQNGKNVVDNPKQDDPAHARTALGVCNDGTIVIVVVEHIYKQHVKDLKLVQVRSILRQE
EEECCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
KEINVDKLIIPEALKILEKHLVNYTVIGLTKTELADYMLTWI
HHCCCCEEEHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCC
>Mature Secondary Structure 
AYRTNAAAAINVGFFEIAGSDDGRPSLILMIDSKLFSLRKQLQSLLIIDQGNIQITKAS
CEECCCCEEEEEEEEEEECCCCCCCEEEEEECHHHHHHHHHHHHEEEEECCCEEEEEEC
AKILVAIGDKSVIPNQVHYFSNLKDTTFYNDVWASTTLTSYTNKEILIDQNRSNFIVTAI
EEEEEEECCCCCCCCHHHHHCCCCCCCEECCHHCCCEEECCCCCEEEEECCCCCEEEEEE
SKHGDNQIPQKGFILSFPQATSLPVVNINDSVKLILEFIDKDGKLINLSNTASIVTGIPL
ECCCCCCCCCCCEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHCCEE
LVQNGKNVVDNPKQDDPAHARTALGVCNDGTIVIVVVEHIYKQHVKDLKLVQVRSILRQE
EEECCCCCCCCCCCCCCCHHHHHEEECCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHH
KEINVDKLIIPEALKILEKHLVNYTVIGLTKTELADYMLTWI
HHCCCCEEEHHHHHHHHHHHHCCEEEEEEEHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]