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The map label for this gene is cvpA

Identifier: 229586264

GI number: 229586264

Start: 41174

End: 41842

Strand: Direct

Name: cvpA

Synonym: RAF_ORF0042

Alternate gene names: NA

Gene position: 41174-41842 (Clockwise)

Preceding gene: 229586262

Following gene: 229586269

Centisome position: 3.22

GC content: 27.06

Gene sequence:

>669_bases
ATGATCACATTTTTTGATATTACTATTTTTGCTATTATTACTCTTTTCTCATTTTTCGGCTTATATCAAGGCATAATCGG
GTTTGCAACTAGAATACTCGGTTTTATTACTTCTATAATGTTAGGATATTTTTTATATCCATATATTTCTGACCTAATCG
GGAAATATATGGATAATGAGGTTATAAGAATAATTATTGCCGGTGTTATATCTTATGTTATTGCTTTAATTTTATGTGTT
TTTATAGTTTATAAATTTCTTGCTATAATTTCATTTATGAGAAACGGTTTTATTGACAGATTCTTAGGGCTATTAGCAGG
ATTTGCCGTAGGTACTACTATCTCGTTAGTACTATTTTTTATAACAATGATCTTTACTTCTGAAAACTATTTTAAAAGTA
AATCTTTAAAAGATTTTGTAGTAAGTAGCAAACAGAGCAAATATGGAGGAGTACTGAAAGTTGCCGTTACCACTGATTAT
TTAGATGAATTAAGTAAAAATATTATAGTTATAATTCCAAACGAGACTTTAAAATCTATTGAAATGTTTGAAAATAAAGA
CCTAAATAATTTCAAAAACTCTCTTAAGAAATCGAATGATTCTAACGATGATGAGGATGTATTTTCTCGAGAATTACAAG
ATGAGCTTTCTAATATAGATGATGAATAG

Upstream 100 bases:

>100_bases
TTACCGGATAAGTTATGAAAAATTTTATCGCCCATAAATTAAACTTTAATTATATAATATATAAGATTTAAATCCAATTA
TTCAATAGAAGTTAACAATA

Downstream 100 bases:

>100_bases
GATGTTATTTTGACGTCATTGCGAGGAAATTACGACATTATTGTGCGAATTGAAAAACGCACTCGGTGTCATCCCGTGGT
TTGACCACGGGATGACAACG

Product: Putative colicin V production membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 222; Mature: 222

Protein sequence:

>222_residues
MITFFDITIFAIITLFSFFGLYQGIIGFATRILGFITSIMLGYFLYPYISDLIGKYMDNEVIRIIIAGVISYVIALILCV
FIVYKFLAIISFMRNGFIDRFLGLLAGFAVGTTISLVLFFITMIFTSENYFKSKSLKDFVVSSKQSKYGGVLKVAVTTDY
LDELSKNIIVIIPNETLKSIEMFENKDLNNFKNSLKKSNDSNDDEDVFSRELQDELSNIDDE

Sequences:

>Translated_222_residues
MITFFDITIFAIITLFSFFGLYQGIIGFATRILGFITSIMLGYFLYPYISDLIGKYMDNEVIRIIIAGVISYVIALILCV
FIVYKFLAIISFMRNGFIDRFLGLLAGFAVGTTISLVLFFITMIFTSENYFKSKSLKDFVVSSKQSKYGGVLKVAVTTDY
LDELSKNIIVIIPNETLKSIEMFENKDLNNFKNSLKKSNDSNDDEDVFSRELQDELSNIDDE
>Mature_222_residues
MITFFDITIFAIITLFSFFGLYQGIIGFATRILGFITSIMLGYFLYPYISDLIGKYMDNEVIRIIIAGVISYVIALILCV
FIVYKFLAIISFMRNGFIDRFLGLLAGFAVGTTISLVLFFITMIFTSENYFKSKSLKDFVVSSKQSKYGGVLKVAVTTDY
LDELSKNIIVIIPNETLKSIEMFENKDLNNFKNSLKKSNDSNDDEDVFSRELQDELSNIDDE

Specific function: Unknown

COG id: COG1286

COG function: function code R; Uncharacterized membrane protein, required for colicin V production

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25256; Mature: 25256

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITFFDITIFAIITLFSFFGLYQGIIGFATRILGFITSIMLGYFLYPYISDLIGKYMDNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRIIIAGVISYVIALILCVFIVYKFLAIISFMRNGFIDRFLGLLAGFAVGTTISLVLFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITMIFTSENYFKSKSLKDFVVSSKQSKYGGVLKVAVTTDYLDELSKNIIVIIPNETLKSI
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHH
EMFENKDLNNFKNSLKKSNDSNDDEDVFSRELQDELSNIDDE
HHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MITFFDITIFAIITLFSFFGLYQGIIGFATRILGFITSIMLGYFLYPYISDLIGKYMDNE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIRIIIAGVISYVIALILCVFIVYKFLAIISFMRNGFIDRFLGLLAGFAVGTTISLVLFF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ITMIFTSENYFKSKSLKDFVVSSKQSKYGGVLKVAVTTDYLDELSKNIIVIIPNETLKSI
HHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHHHCCEEEEECCHHHHHH
EMFENKDLNNFKNSLKKSNDSNDDEDVFSRELQDELSNIDDE
HHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA