| Definition | Sulfolobus tokodaii str. 7 chromosome, complete genome. |
|---|---|
| Accession | NC_003106 |
| Length | 2,694,756 |
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The map label for this gene is 229310097
Identifier: 229310097
GI number: 229310097
Start: 1447887
End: 1449419
Strand: Direct
Name: 229310097
Synonym: ST1443
Alternate gene names: NA
Gene position: 1447887-1449419 (Clockwise)
Preceding gene: 15921733
Following gene: 15921741
Centisome position: 53.73
GC content: 33.27
Gene sequence:
>1533_bases TTGCCTCCGAAAGATCTTTTAATAGATAAGTCAGCCTTAATACATGGCGTATCTAAATATTTAGAGCGTAAAATTATATA CGGTAATATCTTAATTCATAAAAGATTATTAAGCGAGATAGAGAAAGATGCTCGAGAAGGTCTTGTTACTGCTGAAATAG CTCTTGATGAGATTAAAAGGTTGAGAGATGTCTCCGAATCACTTTTAGTTAGCTTTGAAATAGTTGGTGATTTAATTAGT AGACAAGATACAAATGATGAATTAAGGGAATATTGCCTTAAAAGAGGATGTACTATAGTTACAGCTGATGAGATACAGAA ACAAATTGCAGAGAATTTAGGTATAGATGTATTTTACTTAAGTCCATTAGAGAATGCTTTAGAAATAGAGAGTTACTTTG ACGAAAATACTATGAGTGTTCATCTAAAGGAAGGAACCACACCAAAGGCAAAAAGAGGGAAACCGGGTTATTGGCAGTTT GTAGAATTATCTTCAGAGATCACGTCTGGCTATCAAATAAAGAAATTAGTAAGTGAAATATTAGCCTCGGTCAAGTACGT TAAGGATTCTTTCATAGAAATTGAAAGAAAAGGTTCAACAATAGTTCAGTTAGGTAACTATAGGGTTATAATCACTCACC CACCGTTAAGTGATGGCTGGGAAGTTACAATAACTAGACCAGTGACAAGGAAGAAGCTTGAAGATTATAACTTACATGAG AAATTAATGAATAGATTAAAAGAACATGCAGAAGGAATTTTAATTGCTGGTTCTCCAGGTATGGGGAAGACAACATTTGC CCAAGCTTTAGCAGAGTTTTATAATAGAATGGGAAAAGTAGTTAAGACTATTGAATCACCTAGAGATATGCATTTACCAC CAGAAATAACCCAATACTCAAAGAATTACGCTGAAGTTGGAGAACTTCATGACATATTATTACTCAGTAGACCTGACTAT ACTGTATATGATGAAATGAGGAATGACGAGGATTTTAAGTTATATATTGATTTACGATTAGCTGGAATAGGAATGATAGG AGTAGTCCACGCAACATCACCTATAGATGCTATTCATAGATTTATAAATAGGGTTGATATAGGAACTATTCCTAATATCT TGGATACAGTAATATTTATTCATGCAGGAAATGTGGCTAAAGTTTACAGTTTGGATATGACAGTAAAAGTTCCTACTGGA TTGAGAGAGGCTGATTTAGCCAGACCAGTAGTTGAAGTTAAGGATTTAATAGAGGATAAAGTTGAATATGAGATTTATGT ATTTGGAGAACAAACAATGTTAGTACCAGTTGGTAAAATAGCTGGAAACAAACAGAATGCAATGCAGAATAAACTAGAGA GAGTCATACTTAATGTGATTCCAAATGCTTCGGTAACTTATGAAAACGGAGAATATGTTATAACAATTCCTAAAGAAGAA ATAGGCAAATTTAATAAAAAGCTAGTTAGCAAGTTAAAGAGGTATGAGAAGAAGCACGGAATTAGAATAAGAGTTAAGTT TGATACTTCATAA
Upstream 100 bases:
>100_bases GTTATCTTCAACTACTGTAATTCACGAGTTTCTCATTAAAATGGCAAAGAAATAGGTTTATTAGTTTTTAAATTAGATTA ATTTTTAAGGGTTCAAACTA
Downstream 100 bases:
>100_bases GAAAGAATCTAAGGTTCTACTTATTTTACTCTCAACATAACGGACTAGATCTTCTAATTCCATTCCTTTTTCTACTGTTT CTAAATCTATTGCATAATTT
Product: ATPase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 510; Mature: 509
Protein sequence:
>510_residues MPPKDLLIDKSALIHGVSKYLERKIIYGNILIHKRLLSEIEKDAREGLVTAEIALDEIKRLRDVSESLLVSFEIVGDLIS RQDTNDELREYCLKRGCTIVTADEIQKQIAENLGIDVFYLSPLENALEIESYFDENTMSVHLKEGTTPKAKRGKPGYWQF VELSSEITSGYQIKKLVSEILASVKYVKDSFIEIERKGSTIVQLGNYRVIITHPPLSDGWEVTITRPVTRKKLEDYNLHE KLMNRLKEHAEGILIAGSPGMGKTTFAQALAEFYNRMGKVVKTIESPRDMHLPPEITQYSKNYAEVGELHDILLLSRPDY TVYDEMRNDEDFKLYIDLRLAGIGMIGVVHATSPIDAIHRFINRVDIGTIPNILDTVIFIHAGNVAKVYSLDMTVKVPTG LREADLARPVVEVKDLIEDKVEYEIYVFGEQTMLVPVGKIAGNKQNAMQNKLERVILNVIPNASVTYENGEYVITIPKEE IGKFNKKLVSKLKRYEKKHGIRIRVKFDTS
Sequences:
>Translated_510_residues MPPKDLLIDKSALIHGVSKYLERKIIYGNILIHKRLLSEIEKDAREGLVTAEIALDEIKRLRDVSESLLVSFEIVGDLIS RQDTNDELREYCLKRGCTIVTADEIQKQIAENLGIDVFYLSPLENALEIESYFDENTMSVHLKEGTTPKAKRGKPGYWQF VELSSEITSGYQIKKLVSEILASVKYVKDSFIEIERKGSTIVQLGNYRVIITHPPLSDGWEVTITRPVTRKKLEDYNLHE KLMNRLKEHAEGILIAGSPGMGKTTFAQALAEFYNRMGKVVKTIESPRDMHLPPEITQYSKNYAEVGELHDILLLSRPDY TVYDEMRNDEDFKLYIDLRLAGIGMIGVVHATSPIDAIHRFINRVDIGTIPNILDTVIFIHAGNVAKVYSLDMTVKVPTG LREADLARPVVEVKDLIEDKVEYEIYVFGEQTMLVPVGKIAGNKQNAMQNKLERVILNVIPNASVTYENGEYVITIPKEE IGKFNKKLVSKLKRYEKKHGIRIRVKFDTS >Mature_509_residues PPKDLLIDKSALIHGVSKYLERKIIYGNILIHKRLLSEIEKDAREGLVTAEIALDEIKRLRDVSESLLVSFEIVGDLISR QDTNDELREYCLKRGCTIVTADEIQKQIAENLGIDVFYLSPLENALEIESYFDENTMSVHLKEGTTPKAKRGKPGYWQFV ELSSEITSGYQIKKLVSEILASVKYVKDSFIEIERKGSTIVQLGNYRVIITHPPLSDGWEVTITRPVTRKKLEDYNLHEK LMNRLKEHAEGILIAGSPGMGKTTFAQALAEFYNRMGKVVKTIESPRDMHLPPEITQYSKNYAEVGELHDILLLSRPDYT VYDEMRNDEDFKLYIDLRLAGIGMIGVVHATSPIDAIHRFINRVDIGTIPNILDTVIFIHAGNVAKVYSLDMTVKVPTGL READLARPVVEVKDLIEDKVEYEIYVFGEQTMLVPVGKIAGNKQNAMQNKLERVILNVIPNASVTYENGEYVITIPKEEI GKFNKKLVSKLKRYEKKHGIRIRVKFDTS
Specific function: Unknown
COG id: COG1855
COG function: function code R; ATPase (PilT family)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 KH domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR004087 - InterPro: IPR009019 - InterPro: IPR004088 - InterPro: IPR018111 - InterPro: IPR002716 - InterPro: IPR006596 - InterPro: IPR001482 [H]
Pfam domain/function: PF00437 GSPII_E; PF00013 KH_1; PF01850 PIN [H]
EC number: NA
Molecular weight: Translated: 57950; Mature: 57819
Theoretical pI: Translated: 6.66; Mature: 6.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPKDLLIDKSALIHGVSKYLERKIIYGNILIHKRLLSEIEKDAREGLVTAEIALDEIKR CCCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHH LRDVSESLLVSFEIVGDLISRQDTNDELREYCLKRGCTIVTADEIQKQIAENLGIDVFYL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCEEEEEE SPLENALEIESYFDENTMSVHLKEGTTPKAKRGKPGYWQFVELSSEITSGYQIKKLVSEI CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHH LASVKYVKDSFIEIERKGSTIVQLGNYRVIITHPPLSDGWEVTITRPVTRKKLEDYNLHE HHHHHHHHHHHHEEECCCCEEEEECCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCHHH KLMNRLKEHAEGILIAGSPGMGKTTFAQALAEFYNRMGKVVKTIESPRDMHLPPEITQYS HHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KNYAEVGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMIGVVHATSPIDAIHR CCHHHHHHHHHEEEEECCCCCHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHHH FINRVDIGTIPNILDTVIFIHAGNVAKVYSLDMTVKVPTGLREADLARPVVEVKDLIEDK HHHHCCCCCCHHHHHHEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC VEYEIYVFGEQTMLVPVGKIAGNKQNAMQNKLERVILNVIPNASVTYENGEYVITIPKEE CCEEEEEEECCEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH IGKFNKKLVSKLKRYEKKHGIRIRVKFDTS HHHHHHHHHHHHHHHHHHCCEEEEEEECCC >Mature Secondary Structure PPKDLLIDKSALIHGVSKYLERKIIYGNILIHKRLLSEIEKDAREGLVTAEIALDEIKR CCHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEHHHHHHHHHH LRDVSESLLVSFEIVGDLISRQDTNDELREYCLKRGCTIVTADEIQKQIAENLGIDVFYL HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCEEEEHHHHHHHHHHHCCEEEEEE SPLENALEIESYFDENTMSVHLKEGTTPKAKRGKPGYWQFVELSSEITSGYQIKKLVSEI CCCCHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCCCEEEEEEHHHHHCCHHHHHHHHHH LASVKYVKDSFIEIERKGSTIVQLGNYRVIITHPPLSDGWEVTITRPVTRKKLEDYNLHE HHHHHHHHHHHHEEECCCCEEEEECCEEEEEECCCCCCCCEEEEECCHHHHHHHCCCHHH KLMNRLKEHAEGILIAGSPGMGKTTFAQALAEFYNRMGKVVKTIESPRDMHLPPEITQYS HHHHHHHHHHCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHH KNYAEVGELHDILLLSRPDYTVYDEMRNDEDFKLYIDLRLAGIGMIGVVHATSPIDAIHR CCHHHHHHHHHEEEEECCCCCHHHHHCCCCCEEEEEEEEEECCCEEEEEECCCHHHHHHH FINRVDIGTIPNILDTVIFIHAGNVAKVYSLDMTVKVPTGLREADLARPVVEVKDLIEDK HHHHCCCCCCHHHHHHEEEEECCCEEEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHCC VEYEIYVFGEQTMLVPVGKIAGNKQNAMQNKLERVILNVIPNASVTYENGEYVITIPKEE CCEEEEEEECCEEEEEEHHHCCCHHHHHHHHHHHHHHHHCCCCEEEEECCCEEEEECHHH IGKFNKKLVSKLKRYEKKHGIRIRVKFDTS HHHHHHHHHHHHHHHHHHCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]