| Definition | Shewanella amazonensis SB2B chromosome, complete genome. |
|---|---|
| Accession | NC_008700 |
| Length | 4,306,142 |
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The map label for this gene is mreB [H]
Identifier: 229220634
GI number: 229220634
Start: 573182
End: 574231
Strand: Direct
Name: mreB [H]
Synonym: Sama_0467
Alternate gene names: 229220634
Gene position: 573182-574231 (Clockwise)
Preceding gene: 119773606
Following gene: 119773608
Centisome position: 13.31
GC content: 54.95
Gene sequence:
>1050_bases ATGTTCAAAAAGCTGCGTGGCATTTTTTCCAATGATCTTTCGATCGACCTGGGTACCGCCAACACCCTTATCTATGTGCG TGAAGAAGGTATTGTCCTCAATGAACCTTCGGTGGTGGCAATTCGTAACGAACGCAACAGCTCAGGGCAAAAGTCCGTGG CTGCTGTGGGTACCGAAGCCAAGCTGATGCTCGGACGTACCCCTGGCAATATTCAGGCGATTCGCCCGATGAAAGACGGT GTAATCGCCGACTTTTATGTGACTGAGAAGATGCTGCAGCACTTCATTAAGCAAGTTCACAACAACAGTTTCTTTCGCCC AAGCCCCCGGGTGCTGGTGTGCGTGCCAGTAGGAGCCACCCAGGTGGAGCGCCGGGCCATCCGTGAATCAGCCATGGGCG CCGGTGCCCGCGAAGTGTATCTGATTGAAGAGCCAATGGCGGCCGCCATCGGTGCCGGTCTGCCGGTTTCTGAAGCGACA GGCTCCATGGTGGTGGATATCGGTGGTGGTACCACTGAAGTGGCCATCATCTCCCTGAACGGTGTGGTGTACTCATCGTC TGTACGTATCGGTGGTGATAAGTTTGACGATGCCATTATCAATTATGTGCGTCGTAACTACGGCAGCCTGATTGGTGAGG CCACAGCCGAACGTATCAAACACACCATAGGTACTGCTTATCCCGGCGATGAGGTGCTGGAAATTGAAGTGCGTGGTCGT AACCTGGCCGAAGGTGTGCCAAGAAGCTTCACCCTCAACAGCAACGAAATTCTTGAGGCCCTGCAAGAGCCGCTGTCGGG TATCGTCAGTGCCGTGATGGTGGCACTGGAGCAGTCTCCACCGGAACTGGCTTCTGATATCTCAGAGCGCGGCATGGTGC TCACAGGTGGTGGTGCGCTGTTGCGTGACCTCGACCGCCTGCTGATGCAGGAAACCGGTATCCCTGTGATGGTAGCCGAA GATCCGCTGACCTGTGTTGCCAGAGGCGGTGGTAAGGCCCTCGAAATGATCGACATGCACGGTGGCGATCTCTTCTCCGA AGAAAATTAA
Upstream 100 bases:
>100_bases CGATTGTTAACCTCCCCAGTCTTGTGGAATCAGGGTGGCATTGATAAAGTTAGCTGATTTTTCTTTTCTCTGGCTCCTCT CAGAAAAACAGGCTGGTTAC
Downstream 100 bases:
>100_bases CACCACAGGTGAAAGAGGCGGTAAGGCTACCGCCTCCTTTGTTTTATGAAGCCTATTTTTGTTCGCGGCGTCTCAAATCA ATTCCGACTGACACTGGCAA
Product: rod shape-determining protein MreB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 349; Mature: 349
Protein sequence:
>349_residues MFKKLRGIFSNDLSIDLGTANTLIYVREEGIVLNEPSVVAIRNERNSSGQKSVAAVGTEAKLMLGRTPGNIQAIRPMKDG VIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGATQVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEAT GSMVVDIGGGTTEVAIISLNGVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGALLRDLDRLLMQETGIPVMVAE DPLTCVARGGGKALEMIDMHGGDLFSEEN
Sequences:
>Translated_349_residues MFKKLRGIFSNDLSIDLGTANTLIYVREEGIVLNEPSVVAIRNERNSSGQKSVAAVGTEAKLMLGRTPGNIQAIRPMKDG VIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGATQVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEAT GSMVVDIGGGTTEVAIISLNGVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGALLRDLDRLLMQETGIPVMVAE DPLTCVARGGGKALEMIDMHGGDLFSEEN >Mature_349_residues MFKKLRGIFSNDLSIDLGTANTLIYVREEGIVLNEPSVVAIRNERNSSGQKSVAAVGTEAKLMLGRTPGNIQAIRPMKDG VIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGATQVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEAT GSMVVDIGGGTTEVAIISLNGVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGALLRDLDRLLMQETGIPVMVAE DPLTCVARGGGKALEMIDMHGGDLFSEEN
Specific function: Involved in formation of the rod shape of the cell. May act as a negative regulator of ftsI [H]
COG id: COG1077
COG function: function code D; Actin-like ATPase involved in cell morphogenesis
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ftsA/mreB family [H]
Homologues:
Organism=Escherichia coli, GI87082236, Length=348, Percent_Identity=90.5172413793103, Blast_Score=629, Evalue=0.0, Organism=Escherichia coli, GI1786870, Length=356, Percent_Identity=25, Blast_Score=63, Evalue=4e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001023 - InterPro: IPR004753 [H]
Pfam domain/function: PF06723 MreB_Mbl [H]
EC number: NA
Molecular weight: Translated: 37356; Mature: 37356
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.7 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFKKLRGIFSNDLSIDLGTANTLIYVREEGIVLNEPSVVAIRNERNSSGQKSVAAVGTEA CCHHHHHHHCCCCEEEECCCCEEEEEECCCEEECCCCEEEEECCCCCCCCCHHEECCCCE KLMLGRTPGNIQAIRPMKDGVIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGAT EEEEECCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHH QVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAIISLN HHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEC GVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR CEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGAL CHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCHH LRDLDRLLMQETGIPVMVAEDPLTCVARGGGKALEMIDMHGGDLFSEEN HHHHHHHHHHHCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCC >Mature Secondary Structure MFKKLRGIFSNDLSIDLGTANTLIYVREEGIVLNEPSVVAIRNERNSSGQKSVAAVGTEA CCHHHHHHHCCCCEEEECCCCEEEEEECCCEEECCCCEEEEECCCCCCCCCHHEECCCCE KLMLGRTPGNIQAIRPMKDGVIADFYVTEKMLQHFIKQVHNNSFFRPSPRVLVCVPVGAT EEEEECCCCCCEEECCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCHH QVERRAIRESAMGAGAREVYLIEEPMAAAIGAGLPVSEATGSMVVDIGGGTTEVAIISLN HHHHHHHHHHHCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCEEEEECCCCEEEEEEEEC GVVYSSSVRIGGDKFDDAIINYVRRNYGSLIGEATAERIKHTIGTAYPGDEVLEIEVRGR CEEEECEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCC NLAEGVPRSFTLNSNEILEALQEPLSGIVSAVMVALEQSPPELASDISERGMVLTGGGAL CHHCCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCEEEECCCHH LRDLDRLLMQETGIPVMVAEDPLTCVARGGGKALEMIDMHGGDLFSEEN HHHHHHHHHHHCCCEEEEECCCCEEEECCCCCEEEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]