| Definition | Corynebacterium glutamicum ATCC 13032, complete genome. |
|---|---|
| Accession | NC_006958 |
| Length | 3,282,708 |
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The map label for this gene is dfp [H]
Identifier: 229068000
GI number: 229068000
Start: 1701973
End: 1703235
Strand: Reverse
Name: dfp [H]
Synonym: cg1807
Alternate gene names: 229068000
Gene position: 1703235-1701973 (Counterclockwise)
Preceding gene: 62390488
Following gene: 62390485
Centisome position: 51.89
GC content: 57.01
Gene sequence:
>1263_bases ATGACTCATGTTTCAAGCCCCTCCGCACCCCGCAACGTGGTTGTTGGTGTTGCCGGCGGAATCGCAGCGTACAAGGCGTG TCACATCGTGCGCGCGTTTAAAGAAGCGGGCGATAATGTGCGGGTGGTTCCTACGGAATCCGCGTTGAAGTTTGTGGGGA AGGCGACGTTTGAAGCGTTGTCTGGCAATCCGGTGTCTACAACGGTGTTTGATGCGGTGGATTCGGTGCAGCATGTGAAA GTTGGCCAGGAGGCTGATTTGATCGTGATTGCGCCGGCGACAGCCGATTTGATGGCGCGTGTGGTGGCAGGTCGCGGTGA CGATCTGTTGGCGGCGACGCTGCTGGTGGCAACGTGCCCCGTGGTTATTGCGCCGGCCATGCATACGGAGATGTGGTTTA ATCCGGCTACCGTAGCCAATGTGGCAACGCTGAGGCAGCGGGGGATTACCGTGATTGAGCCTGCGCATGGTCGACTCACC GGTAAAGATACAGGCCCTGGCCGGCTGCCGGATCCAGAGCAGATTGTTGATTTAGCCAATGCGGTGCACGCCGGGGCGAG GTTGCCTCAGGATTTGGCGGGCAAGAAAGTGCTGATCACTGCTGGTGGCACGCATGAGCATATTGATCCTGTGCGCTTTA TTGGCAATAGTTCCTCGGGCCGTCAAGGTTTTGCGTTGGGTGAAATCGCAGCACAGCGAGGTGCTCATGTCAGCATCGTG GCGGGAAATGCTGCGGAGCTGCCCACTCCGGCAGGCGCAGAGATCGTGCCGGTGGTGTCCACACAAGACATGTTTGATGC AGTCCAGGAACGAGCTGGCCAATCTGATTTCATCGTCATGGCGGCAGCGGTAGCTGATTTCACGCCCGCATCGCAGGCGA CATCGAAGTTGAAGAAGGGCTCAGATTCTGATGAAGACGCATTGAGCACCATCTCGTTGGTGGAAAACCCGGATATTTTG GCTACCACGGTGAAGCGTCGTGAAGCAGGAGAGCTGGACAGTAATCCTGTCATCGTGGGTTTTGCTGCGGAAACTGGAGA CGAGCACACCACCGCCTTGGAGTATGCGCGCAAGAAACTGCAGAAGAAGGGCTGCGACCTCCTCATGTGTAATGAGGTGG GCATGGGCAAAGTGTTTGGGCAAAAGCACAATGAGGGCTGGATTTTGGATGCTCACGGTGGGGTAGTCGATGTGGAGCAC GGCAGCAAAATCGAGGTTGCTGCGCAAATTTGGGACGCGGCACTGGCGTATCGCGAAGTCTAG
Upstream 100 bases:
>100_bases ACAGCGGAGGTCGAGGGAGAGCGTGGGGTGGCGTCGAAAAGCATCTTGTAGAGTGTGTGGGAACCCAGCCAGCCTCTTAC TTTGAAGGATTGTTGTGCCC
Downstream 100 bases:
>100_bases AAAAATCCAGCTAGACCACTGACATTGCAGTTTTAGACAGCTTGGTCTATATTGGTTTTTTGTATTTAAGACTATTTATT CTCAACTTCTTCGAAAGAAG
Product: bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase
Products: NA
Alternate protein names: DNA/pantothenate metabolism flavoprotein; Phosphopantothenoylcysteine decarboxylase; PPCDC; CoaC; Phosphopantothenate--cysteine ligase; CoaB; PPC synthetase; PPCS; Phosphopantothenoylcysteine synthase [H]
Number of amino acids: Translated: 420; Mature: 419
Protein sequence:
>420_residues MTHVSSPSAPRNVVVGVAGGIAAYKACHIVRAFKEAGDNVRVVPTESALKFVGKATFEALSGNPVSTTVFDAVDSVQHVK VGQEADLIVIAPATADLMARVVAGRGDDLLAATLLVATCPVVIAPAMHTEMWFNPATVANVATLRQRGITVIEPAHGRLT GKDTGPGRLPDPEQIVDLANAVHAGARLPQDLAGKKVLITAGGTHEHIDPVRFIGNSSSGRQGFALGEIAAQRGAHVSIV AGNAAELPTPAGAEIVPVVSTQDMFDAVQERAGQSDFIVMAAAVADFTPASQATSKLKKGSDSDEDALSTISLVENPDIL ATTVKRREAGELDSNPVIVGFAAETGDEHTTALEYARKKLQKKGCDLLMCNEVGMGKVFGQKHNEGWILDAHGGVVDVEH GSKIEVAAQIWDAALAYREV
Sequences:
>Translated_420_residues MTHVSSPSAPRNVVVGVAGGIAAYKACHIVRAFKEAGDNVRVVPTESALKFVGKATFEALSGNPVSTTVFDAVDSVQHVK VGQEADLIVIAPATADLMARVVAGRGDDLLAATLLVATCPVVIAPAMHTEMWFNPATVANVATLRQRGITVIEPAHGRLT GKDTGPGRLPDPEQIVDLANAVHAGARLPQDLAGKKVLITAGGTHEHIDPVRFIGNSSSGRQGFALGEIAAQRGAHVSIV AGNAAELPTPAGAEIVPVVSTQDMFDAVQERAGQSDFIVMAAAVADFTPASQATSKLKKGSDSDEDALSTISLVENPDIL ATTVKRREAGELDSNPVIVGFAAETGDEHTTALEYARKKLQKKGCDLLMCNEVGMGKVFGQKHNEGWILDAHGGVVDVEH GSKIEVAAQIWDAALAYREV >Mature_419_residues THVSSPSAPRNVVVGVAGGIAAYKACHIVRAFKEAGDNVRVVPTESALKFVGKATFEALSGNPVSTTVFDAVDSVQHVKV GQEADLIVIAPATADLMARVVAGRGDDLLAATLLVATCPVVIAPAMHTEMWFNPATVANVATLRQRGITVIEPAHGRLTG KDTGPGRLPDPEQIVDLANAVHAGARLPQDLAGKKVLITAGGTHEHIDPVRFIGNSSSGRQGFALGEIAAQRGAHVSIVA GNAAELPTPAGAEIVPVVSTQDMFDAVQERAGQSDFIVMAAAVADFTPASQATSKLKKGSDSDEDALSTISLVENPDILA TTVKRREAGELDSNPVIVGFAAETGDEHTTALEYARKKLQKKGCDLLMCNEVGMGKVFGQKHNEGWILDAHGGVVDVEHG SKIEVAAQIWDAALAYREV
Specific function: Catalyzes two steps in the biosynthesis of coenzyme A. In the first step cysteine is conjugated to 4'-phosphopantothenate to form 4-phosphopantothenoylcysteine, in the latter compound is decarboxylated to form 4'-phosphopantotheine [H]
COG id: COG0452
COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the PPC synthetase family [H]
Homologues:
Organism=Homo sapiens, GI71725351, Length=182, Percent_Identity=30.2197802197802, Blast_Score=66, Evalue=6e-11, Organism=Escherichia coli, GI87082301, Length=365, Percent_Identity=41.0958904109589, Blast_Score=237, Evalue=1e-63,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005252 - InterPro: IPR007085 - InterPro: IPR003382 [H]
Pfam domain/function: PF04127 DFP; PF02441 Flavoprotein [H]
EC number: =4.1.1.36; =6.3.2.5 [H]
Molecular weight: Translated: 43856; Mature: 43725
Theoretical pI: Translated: 5.56; Mature: 5.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHVSSPSAPRNVVVGVAGGIAAYKACHIVRAFKEAGDNVRVVPTESALKFVGKATFEAL CCCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH SGNPVSTTVFDAVDSVQHVKVGQEADLIVIAPATADLMARVVAGRGDDLLAATLLVATCP CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VVIAPAMHTEMWFNPATVANVATLRQRGITVIEPAHGRLTGKDTGPGRLPDPEQIVDLAN HHEECCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHH AVHAGARLPQDLAGKKVLITAGGTHEHIDPVRFIGNSSSGRQGFALGEIAAQRGAHVSIV HHHHHCCCCHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCCCCCHHHHHHHCCCEEEEE AGNAAELPTPAGAEIVPVVSTQDMFDAVQERAGQSDFIVMAAAVADFTPASQATSKLKKG ECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHCC SDSDEDALSTISLVENPDILATTVKRREAGELDSNPVIVGFAAETGDEHTTALEYARKKL CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH QKKGCDLLMCNEVGMGKVFGQKHNEGWILDAHGGVVDVEHGSKIEVAAQIWDAALAYREV HHCCCCEEEECCCCCCHHHCCCCCCCEEEECCCCEEECCCCCEEEHHHHHHHHHHHHHCC >Mature Secondary Structure THVSSPSAPRNVVVGVAGGIAAYKACHIVRAFKEAGDNVRVVPTESALKFVGKATFEAL CCCCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHHHHHHHH SGNPVSTTVFDAVDSVQHVKVGQEADLIVIAPATADLMARVVAGRGDDLLAATLLVATCP CCCCCCHHHHHHHHHHHHHCCCCCCCEEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHH VVIAPAMHTEMWFNPATVANVATLRQRGITVIEPAHGRLTGKDTGPGRLPDPEQIVDLAN HHEECCHHHHHCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCCCCCCCCCHHHHHHHHH AVHAGARLPQDLAGKKVLITAGGTHEHIDPVRFIGNSSSGRQGFALGEIAAQRGAHVSIV HHHHHCCCCHHHCCCEEEEEECCCCCCCCHHEEECCCCCCCCCCCHHHHHHHCCCEEEEE AGNAAELPTPAGAEIVPVVSTQDMFDAVQERAGQSDFIVMAAAVADFTPASQATSKLKKG ECCCCCCCCCCCCEEEEEECCHHHHHHHHHHCCCCCEEEEEEHHHCCCCHHHHHHHHHCC SDSDEDALSTISLVENPDILATTVKRREAGELDSNPVIVGFAAETGDEHTTALEYARKKL CCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHH QKKGCDLLMCNEVGMGKVFGQKHNEGWILDAHGGVVDVEHGSKIEVAAQIWDAALAYREV HHCCCCEEEECCCCCCHHHCCCCCCCEEEECCCCEEECCCCCEEEHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]